RNA–Protein interactions for RNA: ENST00000603717.1

AC008555.3-201, humanhuman

TSL 3 BASIC

Gene AC008555.3, Length 442 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.3-201ENST00000603717 MICALL2Q8IY33 904 aa12.17□□□□□ -0.46
AC008555.3-201ENST00000603717 GSE1Q14687 1217 aa12.14□□□□□ -0.47
AC008555.3-201ENST00000603717 ADGRD1Q6QNK2 874 aa12.11□□□□□ -0.47
AC008555.3-201ENST00000603717 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
AC008555.3-201ENST00000603717 HRO43593 1189 aa12.04□□□□□ -0.48
AC008555.3-201ENST00000603717 EFCAB3Q8N7B9 438 aa12.02□□□□□ -0.49
AC008555.3-201ENST00000603717 A0A0G2JS52 829 aa12□□□□□ -0.49
AC008555.3-201ENST00000603717 NUDT7P0C024 238 aa12□□□□□ -0.49
AC008555.3-201ENST00000603717 LHX6Q9UPM6 363 aa12□□□□□ -0.49
AC008555.3-201ENST00000603717 KCTD12Q96CX2 325 aaKnown RBP11.99□□□□□ -0.49
AC008555.3-201ENST00000603717 TK2O00142 265 aa11.94□□□□□ -0.5
AC008555.3-201ENST00000603717 ARHGAP33O14559 1287 aa11.94□□□□□ -0.5
AC008555.3-201ENST00000603717 Q6ZNB5 142 aa11.94□□□□□ -0.5
AC008555.3-201ENST00000603717 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
AC008555.3-201ENST00000603717 LCE2BO14633 110 aa11.91□□□□□ -0.5
AC008555.3-201ENST00000603717 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.5
AC008555.3-201ENST00000603717 PTPN5P54829 565 aa11.83□□□□□ -0.52
AC008555.3-201ENST00000603717 PSEN2P49810 448 aa11.82□□□□□ -0.52
AC008555.3-201ENST00000603717 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
AC008555.3-201ENST00000603717 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
AC008555.3-201ENST00000603717 KIF3CO14782 793 aa11.79□□□□□ -0.52
AC008555.3-201ENST00000603717 SOX12O15370 315 aa11.76□□□□□ -0.53
AC008555.3-201ENST00000603717 SLC34A2O95436 690 aa11.76□□□□□ -0.53
AC008555.3-201ENST00000603717 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
AC008555.3-201ENST00000603717 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
AC008555.3-201ENST00000603717 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
AC008555.3-201ENST00000603717 C2orf72A6NCS6 295 aa11.7□□□□□ -0.54
AC008555.3-201ENST00000603717 THSD4Q6ZMP0 1018 aa11.69□□□□□ -0.54
AC008555.3-201ENST00000603717 STAC3Q96MF2 364 aa11.68□□□□□ -0.54
AC008555.3-201ENST00000603717 TRAF7Q6Q0C0 670 aa11.67□□□□□ -0.54
AC008555.3-201ENST00000603717 VASPP50552 380 aaPredicted RBP11.64□□□□□ -0.55
AC008555.3-201ENST00000603717 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
AC008555.3-201ENST00000603717 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
AC008555.3-201ENST00000603717 CIZ1Q9ULV3 898 aaPredicted RBP11.61□□□□□ -0.55
AC008555.3-201ENST00000603717 LAPTM4AQ15012 233 aa11.59□□□□□ -0.55
AC008555.3-201ENST00000603717 FKBP8Q14318 412 aa11.58□□□□□ -0.56
AC008555.3-201ENST00000603717 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
AC008555.3-201ENST00000603717 BHMG1C9JSJ3 638 aaPredicted RBP11.55□□□□□ -0.56
AC008555.3-201ENST00000603717 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
AC008555.3-201ENST00000603717 KCNK17Q96T54 332 aa11.55□□□□□ -0.56
AC008555.3-201ENST00000603717 ZNF775Q96BV0 537 aaPredicted RBP11.53□□□□□ -0.56
AC008555.3-201ENST00000603717 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
AC008555.3-201ENST00000603717 WNT2BQ93097 391 aa11.5□□□□□ -0.57
AC008555.3-201ENST00000603717 GFRA3O60609 400 aa11.49□□□□□ -0.57
AC008555.3-201ENST00000603717 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
AC008555.3-201ENST00000603717 SLC4A5Q9BY07 1137 aa11.48□□□□□ -0.57
AC008555.3-201ENST00000603717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.47□□□□□ -0.57
AC008555.3-201ENST00000603717 NLRP6P59044 892 aa11.47□□□□□ -0.57
AC008555.3-201ENST00000603717 ZFP91Q96JP5 570 aaPredicted RBP11.47□□□□□ -0.57
AC008555.3-201ENST00000603717 ZNF787Q6DD87 383 aa11.46□□□□□ -0.57
AC008555.3-201ENST00000603717 PTCD2Q8WV60 388 aaKnown RBP11.46□□□□□ -0.57
AC008555.3-201ENST00000603717 RNF25Q96BH1 459 aaPredicted RBP11.41□□□□□ -0.58
AC008555.3-201ENST00000603717 GOLGA8CPA6NN73 597 aa11.39□□□□□ -0.59
AC008555.3-201ENST00000603717 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
AC008555.3-201ENST00000603717 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
AC008555.3-201ENST00000603717 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
AC008555.3-201ENST00000603717 NRG2O14511 850 aaPredicted RBP11.37□□□□□ -0.59
AC008555.3-201ENST00000603717 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
AC008555.3-201ENST00000603717 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
AC008555.3-201ENST00000603717 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
AC008555.3-201ENST00000603717 LOC100996750A0A140TA64 210 aa11.35□□□□□ -0.59
AC008555.3-201ENST00000603717 RIOK3O14730 519 aaKnown RBP11.35□□□□□ -0.59
AC008555.3-201ENST00000603717 KRTAP4-6Q9BYQ5 205 aa11.35□□□□□ -0.59
AC008555.3-201ENST00000603717 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
AC008555.3-201ENST00000603717 BCL2L12Q9HB09 334 aa11.32□□□□□ -0.6
AC008555.3-201ENST00000603717 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
AC008555.3-201ENST00000603717 KCNC4Q03721 635 aa11.27□□□□□ -0.61
AC008555.3-201ENST00000603717 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
AC008555.3-201ENST00000603717 BCAMP50895 628 aa11.21□□□□□ -0.61
AC008555.3-201ENST00000603717 LCE2AQ5TA79 106 aaPredicted RBP11.21□□□□□ -0.61
AC008555.3-201ENST00000603717 ZNF454Q8N9F8 522 aa11.21□□□□□ -0.61
AC008555.3-201ENST00000603717 PTPREP23469 700 aa11.19□□□□□ -0.62
AC008555.3-201ENST00000603717 FOXK1P85037 733 aa11.18□□□□□ -0.62
AC008555.3-201ENST00000603717 PLPP6Q8IY26 295 aa11.18□□□□□ -0.62
AC008555.3-201ENST00000603717 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
AC008555.3-201ENST00000603717 PRKD2Q9BZL6 878 aa11.18□□□□□ -0.62
AC008555.3-201ENST00000603717 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
AC008555.3-201ENST00000603717 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
AC008555.3-201ENST00000603717 TBC1D12O60347 775 aa11.16□□□□□ -0.62
AC008555.3-201ENST00000603717 SOWAHBA6NEL2 793 aa11.15□□□□□ -0.62
AC008555.3-201ENST00000603717 WBP1LQ9NX94 342 aa11.15□□□□□ -0.62
AC008555.3-201ENST00000603717 FOSBP53539 338 aa11.14□□□□□ -0.63
AC008555.3-201ENST00000603717 V9GY48 417 aaPredicted RBP11.1□□□□□ -0.63
AC008555.3-201ENST00000603717 POTECB2RU33 542 aa11.09□□□□□ -0.63
AC008555.3-201ENST00000603717 PPP1R37O75864 691 aa11.08□□□□□ -0.64
AC008555.3-201ENST00000603717 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
AC008555.3-201ENST00000603717 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
AC008555.3-201ENST00000603717 DSG2Q14126 1118 aa11.07□□□□□ -0.64
AC008555.3-201ENST00000603717 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
AC008555.3-201ENST00000603717 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
AC008555.3-201ENST00000603717 PDZRN3Q9UPQ7 1066 aa11.07□□□□□ -0.64
AC008555.3-201ENST00000603717 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
AC008555.3-201ENST00000603717 CCDC180Q9P1Z9 1646 aa11.05□□□□□ -0.64
AC008555.3-201ENST00000603717 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
AC008555.3-201ENST00000603717 PROX2Q3B8N5 592 aa11.01□□□□□ -0.65
AC008555.3-201ENST00000603717 LAPTM4BQ86VI4 370 aa11.01□□□□□ -0.65
AC008555.3-201ENST00000603717 ZFRQ96KR1 1074 aaKnown RBP11.01□□□□□ -0.65
AC008555.3-201ENST00000603717 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
AC008555.3-201ENST00000603717 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
AC008555.3-201ENST00000603717 STK17AQ9UEE5 414 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms