RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 ARHGAP5Q13017 1502 aa37.82■■■■□ 3.65
SSX2IP-209ENST00000603677 SCAPERQ9BY12 1400 aa37.82■■■■□ 3.64
SSX2IP-209ENST00000603677 PREX2Q70Z35 1606 aa37.8■■■■□ 3.64
SSX2IP-209ENST00000603677 MTUS2Q5JR59 1369 aa37.8■■■■□ 3.64
SSX2IP-209ENST00000603677 CDC42BPBQ9Y5S2 1711 aa37.78■■■■□ 3.64
SSX2IP-209ENST00000603677 POGZQ7Z3K3 1410 aa37.78■■■■□ 3.64
SSX2IP-209ENST00000603677 VPS8Q8N3P4 1428 aa37.78■■■■□ 3.64
SSX2IP-209ENST00000603677 EHBP1L1Q8N3D4 1523 aa37.72■■■■□ 3.63
SSX2IP-209ENST00000603677 ARHGEF40Q8TER5 1519 aa37.71■■■■□ 3.63
SSX2IP-209ENST00000603677 ZNF518AQ6AHZ1 1483 aa37.71■■■■□ 3.63
SSX2IP-209ENST00000603677 CDC42BPAQ5VT25 1732 aa37.71■■■■□ 3.63
SSX2IP-209ENST00000603677 GPATCH8Q9UKJ3 1502 aaKnown RBP37.66■■■■□ 3.62
SSX2IP-209ENST00000603677 ZFYVE16Q7Z3T8 1539 aa37.65■■■■□ 3.62
SSX2IP-209ENST00000603677 MAP3K1Q13233 1512 aa37.64■■■■□ 3.62
SSX2IP-209ENST00000603677 CCNB3Q8WWL7 1395 aa37.63■■■■□ 3.61
SSX2IP-209ENST00000603677 KDM5CP41229 1560 aa37.62■■■■□ 3.61
SSX2IP-209ENST00000603677 ABCC1P33527 1531 aa37.61■■■■□ 3.61
SSX2IP-209ENST00000603677 TIAM1Q13009 1591 aa37.6■■■■□ 3.61
SSX2IP-209ENST00000603677 PLEKHH2Q8IVE3 1493 aa37.58■■■■□ 3.61
SSX2IP-209ENST00000603677 CFDP1Q9UEE9 299 aaPredicted RBP37.56■■■■□ 3.6
SSX2IP-209ENST00000603677 KIAA1107Q9UPP5 1409 aa37.55■■■■□ 3.6
SSX2IP-209ENST00000603677 MLH3Q9UHC1 1453 aa37.53■■■■□ 3.6
SSX2IP-209ENST00000603677 ITSN2Q9NZM3 1697 aa37.53■■■■□ 3.6
SSX2IP-209ENST00000603677 YEATS2Q9ULM3 1422 aa37.53■■■■□ 3.6
SSX2IP-209ENST00000603677 AFAP1Q8N556 730 aa37.52■■■■□ 3.6
SSX2IP-209ENST00000603677 SUPT6HQ7KZ85 1726 aaKnown RBP37.52■■■■□ 3.6
SSX2IP-209ENST00000603677 ATP10AO60312 1499 aa37.52■■■■□ 3.6
SSX2IP-209ENST00000603677 ARID4BQ4LE39 1312 aaPredicted RBP37.5■■■■□ 3.59
SSX2IP-209ENST00000603677 ARHGEF12Q9NZN5 1544 aa37.49■■■■□ 3.59
SSX2IP-209ENST00000603677 HECW2Q9P2P5 1572 aa37.49■■■■□ 3.59
SSX2IP-209ENST00000603677 ADAMTSL3P82987 1691 aa37.49■■■■□ 3.59
SSX2IP-209ENST00000603677 BCORL1Q5H9F3 1711 aa37.49■■■■□ 3.59
SSX2IP-209ENST00000603677 SAMD9LQ8IVG5 1584 aa37.48■■■■□ 3.59
SSX2IP-209ENST00000603677 LRRC9Q6ZRR7 1453 aa37.46■■■■□ 3.59
SSX2IP-209ENST00000603677 C9orf84Q5VXU9 1444 aa37.46■■■■□ 3.59
SSX2IP-209ENST00000603677 TRAPPC8Q9Y2L5 1435 aa37.45■■■■□ 3.59
SSX2IP-209ENST00000603677 ZNF777Q9ULD5 760 aaPredicted RBP37.44■■■■□ 3.58
SSX2IP-209ENST00000603677 NCOA2Q15596 1464 aa37.44■■■■□ 3.58
SSX2IP-209ENST00000603677 REREQ9P2R6 1566 aa37.42■■■■□ 3.58
SSX2IP-209ENST00000603677 SYCP2Q9BX26 1530 aa37.38■■■■□ 3.57
SSX2IP-209ENST00000603677 APLP2Q06481 763 aa37.38■■■■□ 3.57
SSX2IP-209ENST00000603677 MYT1LQ9UL68 1186 aa37.37■■■■□ 3.57
SSX2IP-209ENST00000603677 RSPH4AQ5TD94 716 aa37.34■■■■□ 3.57
SSX2IP-209ENST00000603677 DIP2CQ9Y2E4 1556 aa37.34■■■■□ 3.57
SSX2IP-209ENST00000603677 HNRNPMP52272 730 aaKnown RBP eCLIP37.33■■■■□ 3.571e-7■■■■□ 19.5
SSX2IP-209ENST00000603677 KIDINS220Q9ULH0 1771 aa37.31■■■■□ 3.56
SSX2IP-209ENST00000603677 SPAG9O60271 1321 aaKnown RBP37.31■■■■□ 3.56
SSX2IP-209ENST00000603677 PTPRMP28827 1452 aa37.3■■■■□ 3.56
SSX2IP-209ENST00000603677 AGLP35573 1532 aa37.28■■■■□ 3.56
SSX2IP-209ENST00000603677 SIGLEC1Q9BZZ2 1709 aa37.27■■■■□ 3.56
SSX2IP-209ENST00000603677 ABCA6Q8N139 1617 aa37.27■■■■□ 3.56
SSX2IP-209ENST00000603677 MADDQ8WXG6 1647 aa37.27■■■■□ 3.56
SSX2IP-209ENST00000603677 MBD5Q9P267 1494 aa37.26■■■■□ 3.55
SSX2IP-209ENST00000603677 KANK4Q5T7N3 995 aaPredicted RBP37.24■■■■□ 3.55
SSX2IP-209ENST00000603677 RTEL1-TNFRSF6BF6WH68 1400 aa37.21■■■■□ 3.55
SSX2IP-209ENST00000603677 MIA2Q96PC5 1412 aa37.21■■■■□ 3.55
SSX2IP-209ENST00000603677 ATP7AQ04656 1500 aa37.2■■■■□ 3.55
SSX2IP-209ENST00000603677 ZNF644Q9H582 1327 aaPredicted RBP37.2■■■■□ 3.55
SSX2IP-209ENST00000603677 INO80Q9ULG1 1556 aaPredicted RBP37.2■■■■□ 3.55
SSX2IP-209ENST00000603677 CAMSAP2Q08AD1 1489 aa37.18■■■■□ 3.54
SSX2IP-209ENST00000603677 MYOM3Q5VTT5 1437 aa37.15■■■■□ 3.54
SSX2IP-209ENST00000603677 RIMS1Q86UR5 1692 aaKnown RBP37.15■■■■□ 3.54
SSX2IP-209ENST00000603677 CCDC141Q6ZP82 1450 aa37.14■■■■□ 3.54
SSX2IP-209ENST00000603677 FER1L4A9Z1Z3 1794 aa37.14■■■■□ 3.54
SSX2IP-209ENST00000603677 ARHGEF5Q12774 1597 aa37.13■■■■□ 3.53
SSX2IP-209ENST00000603677 MLECQ14165 292 aa37.11■■■■□ 3.53
SSX2IP-209ENST00000603677 ADGBQ8N7X0 1667 aa37.08■■■■□ 3.53
SSX2IP-209ENST00000603677 A2MP01023 1474 aa37.07■■■■□ 3.52
SSX2IP-209ENST00000603677 TSPY4P0CV99 314 aa37.05■■■■□ 3.52
SSX2IP-209ENST00000603677 TSPY10P0CW01 314 aa37.05■■■■□ 3.52
SSX2IP-209ENST00000603677 PLXNC1O60486 1568 aa37.04■■■■□ 3.52
SSX2IP-209ENST00000603677 CNTLNQ9NXG0 1405 aa37.01■■■■□ 3.51
SSX2IP-209ENST00000603677 PPP6R1Q9UPN7 881 aa37■■■■□ 3.51
SSX2IP-209ENST00000603677 ESF1Q9H501 851 aaKnown RBP36.99■■■■□ 3.51
SSX2IP-209ENST00000603677 DHX29Q7Z478 1369 aaKnown RBP36.96■■■■□ 3.51
SSX2IP-209ENST00000603677 MAST1Q9Y2H9 1570 aa36.94■■■■□ 3.5
SSX2IP-209ENST00000603677 SETD1BQ9UPS6 1966 aaKnown RBP36.89■■■■□ 3.5
SSX2IP-209ENST00000603677 FGD6Q6ZV73 1430 aa36.88■■■■□ 3.49
SSX2IP-209ENST00000603677 PTPN23Q9H3S7 1636 aa36.87■■■■□ 3.49
SSX2IP-209ENST00000603677 TCOF1Q13428 1488 aaKnown RBP36.87■■■■□ 3.49
SSX2IP-209ENST00000603677 MROH2AA6NES4 1674 aa36.86■■■■□ 3.49
SSX2IP-209ENST00000603677 LMTK3Q96Q04 1460 aa36.82■■■■□ 3.49
SSX2IP-209ENST00000603677 FAM135AQ9P2D6 1515 aa36.82■■■■□ 3.48
SSX2IP-209ENST00000603677 SHANK2Q9UPX8 1470 aa36.81■■■■□ 3.48
SSX2IP-209ENST00000603677 C3P01024 1663 aa36.79■■■■□ 3.48
SSX2IP-209ENST00000603677 GGT6Q6P531 493 aa36.77■■■■□ 3.48
SSX2IP-209ENST00000603677 PREX1Q8TCU6 1659 aa36.76■■■■□ 3.47
SSX2IP-209ENST00000603677 CEBPAP49715 358 aaPredicted RBP36.75■■■■□ 3.47
SSX2IP-209ENST00000603677 ZMYM3Q14202 1370 aa36.74■■■■□ 3.47
SSX2IP-209ENST00000603677 ABCC5O15440 1437 aa36.73■■■■□ 3.47
SSX2IP-209ENST00000603677 NPATQ14207 1427 aa36.73■■■■□ 3.47
SSX2IP-209ENST00000603677 DNMT1P26358 1616 aaKnown RBP36.73■■■■□ 3.47
SSX2IP-209ENST00000603677 KIF3BO15066 747 aa36.72■■■■□ 3.47
SSX2IP-209ENST00000603677 PLPPR3Q6T4P5 718 aa36.72■■■■□ 3.47
SSX2IP-209ENST00000603677 CROCC2H7BZ55 1655 aa36.71■■■■□ 3.47
SSX2IP-209ENST00000603677 DAPK1P53355 1430 aa36.7■■■■□ 3.47
SSX2IP-209ENST00000603677 EIF2AK4Q9P2K8 1649 aaKnown RBP36.7■■■■□ 3.47
SSX2IP-209ENST00000603677 DUOX2Q9NRD8 1548 aa36.68■■■■□ 3.46
SSX2IP-209ENST00000603677 UHRF1BP1Q6BDS2 1440 aa36.68■■■■□ 3.46
SSX2IP-209ENST00000603677 CLTCQ00610 1675 aaKnown RBP36.67■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms