RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 MICALL2Q8IY33 904 aa11.79□□□□□ -0.52
FOCAD-208ENST00000603648 KHSRPQ92945 711 aaKnown RBP eCLIP11.79□□□□□ -0.52
FOCAD-208ENST00000603648 PBX2P40425 430 aa11.75□□□□□ -0.53
FOCAD-208ENST00000603648 EFCAB3Q8N7B9 438 aa11.74□□□□□ -0.53
FOCAD-208ENST00000603648 SPOCK2Q92563 424 aa11.74□□□□□ -0.53
FOCAD-208ENST00000603648 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
FOCAD-208ENST00000603648 AXIN2Q9Y2T1 843 aa11.73□□□□□ -0.53
FOCAD-208ENST00000603648 IRX2Q9BZI1 471 aaPredicted RBP11.71□□□□□ -0.53
FOCAD-208ENST00000603648 POTEEQ6S8J3 1075 aa11.66□□□□□ -0.54
FOCAD-208ENST00000603648 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
FOCAD-208ENST00000603648 NUDT7P0C024 238 aa11.63□□□□□ -0.55
FOCAD-208ENST00000603648 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
FOCAD-208ENST00000603648 LHX6Q9UPM6 363 aa11.6□□□□□ -0.55
FOCAD-208ENST00000603648 RGS20O76081 388 aa11.59□□□□□ -0.55
FOCAD-208ENST00000603648 KCTD12Q96CX2 325 aaKnown RBP11.57□□□□□ -0.56
FOCAD-208ENST00000603648 PKD2Q13563 968 aa11.55□□□□□ -0.56
FOCAD-208ENST00000603648 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
FOCAD-208ENST00000603648 ARHGAP33O14559 1287 aa11.53□□□□□ -0.56
FOCAD-208ENST00000603648 SOX12O15370 315 aa11.52□□□□□ -0.57
FOCAD-208ENST00000603648 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
FOCAD-208ENST00000603648 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
FOCAD-208ENST00000603648 HRO43593 1189 aa11.48□□□□□ -0.57
FOCAD-208ENST00000603648 TK2O00142 265 aa11.47□□□□□ -0.57
FOCAD-208ENST00000603648 PCDHGA4Q9Y5G9 962 aa11.46□□□□□ -0.57
FOCAD-208ENST00000603648 PTPN5P54829 565 aa11.45□□□□□ -0.58
FOCAD-208ENST00000603648 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
FOCAD-208ENST00000603648 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
FOCAD-208ENST00000603648 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
FOCAD-208ENST00000603648 Q6ZNB5 142 aa11.44□□□□□ -0.58
FOCAD-208ENST00000603648 A0A0G2JS52 829 aa11.42□□□□□ -0.58
FOCAD-208ENST00000603648 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
FOCAD-208ENST00000603648 PSEN2P49810 448 aa11.41□□□□□ -0.58
FOCAD-208ENST00000603648 PSDA5PKW4 1024 aaPredicted RBP11.39□□□□□ -0.59
FOCAD-208ENST00000603648 C2orf72A6NCS6 295 aa11.39□□□□□ -0.59
FOCAD-208ENST00000603648 SLC34A2O95436 690 aa11.36□□□□□ -0.59
FOCAD-208ENST00000603648 KIF3CO14782 793 aa11.35□□□□□ -0.59
FOCAD-208ENST00000603648 RGL2O15211 777 aa11.34□□□□□ -0.59
FOCAD-208ENST00000603648 NLRP6P59044 892 aa11.31□□□□□ -0.6
FOCAD-208ENST00000603648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.3□□□□□ -0.6
FOCAD-208ENST00000603648 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
FOCAD-208ENST00000603648 RNF25Q96BH1 459 aaPredicted RBP11.29□□□□□ -0.6
FOCAD-208ENST00000603648 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
FOCAD-208ENST00000603648 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
FOCAD-208ENST00000603648 RIOK3O14730 519 aaKnown RBP11.24□□□□□ -0.61
FOCAD-208ENST00000603648 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
FOCAD-208ENST00000603648 DCAF8L2P0C7V8 631 aa11.23□□□□□ -0.61
FOCAD-208ENST00000603648 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
FOCAD-208ENST00000603648 FBXO22Q8NEZ5 403 aa11.23□□□□□ -0.61
FOCAD-208ENST00000603648 TMC2Q8TDI7 906 aa11.23□□□□□ -0.61
FOCAD-208ENST00000603648 VPS9D1Q9Y2B5 631 aa11.21□□□□□ -0.61
FOCAD-208ENST00000603648 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
FOCAD-208ENST00000603648 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
FOCAD-208ENST00000603648 TAOK2Q9UL54 1235 aa11.19□□□□□ -0.62
FOCAD-208ENST00000603648 KDM4FA0A1W2PPD8 638 aa11.18□□□□□ -0.62
FOCAD-208ENST00000603648 WNT2BQ93097 391 aa11.16□□□□□ -0.62
FOCAD-208ENST00000603648 TRAF7Q6Q0C0 670 aa11.12□□□□□ -0.63
FOCAD-208ENST00000603648 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
FOCAD-208ENST00000603648 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
FOCAD-208ENST00000603648 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
FOCAD-208ENST00000603648 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
FOCAD-208ENST00000603648 LCE2BO14633 110 aa11.1□□□□□ -0.63
FOCAD-208ENST00000603648 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
FOCAD-208ENST00000603648 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
FOCAD-208ENST00000603648 BCL11BQ9C0K0 894 aaPredicted RBP11.08□□□□□ -0.64
FOCAD-208ENST00000603648 BHMG1C9JSJ3 638 aaPredicted RBP11.06□□□□□ -0.64
FOCAD-208ENST00000603648 STK25O00506 426 aa11.06□□□□□ -0.64
FOCAD-208ENST00000603648 DNAJC5Q9H3Z4 198 aa11.06□□□□□ -0.64
FOCAD-208ENST00000603648 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
FOCAD-208ENST00000603648 SLC4A5Q9BY07 1137 aa11.05□□□□□ -0.64
FOCAD-208ENST00000603648 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
FOCAD-208ENST00000603648 GFRA3O60609 400 aa11.04□□□□□ -0.64
FOCAD-208ENST00000603648 ITGBL1O95965 494 aaPredicted RBP11.04□□□□□ -0.64
FOCAD-208ENST00000603648 TBC1D12O60347 775 aa11.03□□□□□ -0.64
FOCAD-208ENST00000603648 ZNF454Q8N9F8 522 aa10.98□□□□□ -0.65
FOCAD-208ENST00000603648 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
FOCAD-208ENST00000603648 NBPF3Q9H094 633 aa10.97□□□□□ -0.65
FOCAD-208ENST00000603648 BCL2L12Q9HB09 334 aa10.97□□□□□ -0.65
FOCAD-208ENST00000603648 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
FOCAD-208ENST00000603648 ZNF787Q6DD87 383 aa10.96□□□□□ -0.65
FOCAD-208ENST00000603648 ZBED2Q9BTP6 218 aa10.96□□□□□ -0.65
FOCAD-208ENST00000603648 NKX1-1Q15270 411 aaPredicted RBP10.95□□□□□ -0.66
FOCAD-208ENST00000603648 PTPREP23469 700 aa10.94□□□□□ -0.66
FOCAD-208ENST00000603648 PLCB2Q00722 1185 aa10.94□□□□□ -0.66
FOCAD-208ENST00000603648 FOXK1P85037 733 aa10.93□□□□□ -0.66
FOCAD-208ENST00000603648 KCNC4Q03721 635 aa10.92□□□□□ -0.66
FOCAD-208ENST00000603648 ZNF775Q96BV0 537 aaPredicted RBP10.91□□□□□ -0.66
FOCAD-208ENST00000603648 ANKK1Q8NFD2 765 aa10.9□□□□□ -0.66
FOCAD-208ENST00000603648 PAXIP1Q6ZW49 1069 aaPredicted RBP10.88□□□□□ -0.67
FOCAD-208ENST00000603648 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
FOCAD-208ENST00000603648 NRG2O14511 850 aaPredicted RBP10.87□□□□□ -0.67
FOCAD-208ENST00000603648 BCAMP50895 628 aa10.87□□□□□ -0.67
FOCAD-208ENST00000603648 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
FOCAD-208ENST00000603648 PPP1R37O75864 691 aa10.86□□□□□ -0.67
FOCAD-208ENST00000603648 CFAP44Q96MT7 982 aa10.85□□□□□ -0.67
FOCAD-208ENST00000603648 DSG2Q14126 1118 aa10.84□□□□□ -0.67
FOCAD-208ENST00000603648 RYDENQ9NUL5 291 aaKnown RBP10.84□□□□□ -0.67
FOCAD-208ENST00000603648 NYAP1Q6ZVC0 841 aa10.83□□□□□ -0.68
FOCAD-208ENST00000603648 FOSBP53539 338 aa10.82□□□□□ -0.68
FOCAD-208ENST00000603648 UPF1Q92900 1129 aaKnown RBP eCLIP10.82□□□□□ -0.68
FOCAD-208ENST00000603648 GPHNQ9NQX3 736 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms