RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZBTB47Q9UFB7 747 aaPredicted RBP7.36□□□□□ -1.23
SPTBN1-206ENST00000602898 FARP1Q9Y4F1 1045 aaPredicted RBP7.36□□□□□ -1.23
SPTBN1-206ENST00000602898 NCAPD3P42695 1498 aa7.35□□□□□ -1.23
SPTBN1-206ENST00000602898 NEUROD2Q15784 382 aa7.34□□□□□ -1.23
SPTBN1-206ENST00000602898 PIP4P2Q8N4L2 257 aa7.34□□□□□ -1.23
SPTBN1-206ENST00000602898 ZMYND15Q9H091 742 aa7.34□□□□□ -1.24
SPTBN1-206ENST00000602898 FGD1P98174 961 aa7.33□□□□□ -1.24
SPTBN1-206ENST00000602898 RSPH6AQ9H0K4 717 aa7.33□□□□□ -1.24
SPTBN1-206ENST00000602898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.32□□□□□ -1.24
SPTBN1-206ENST00000602898 ZFP91Q96JP5 570 aaPredicted RBP7.32□□□□□ -1.24
SPTBN1-206ENST00000602898 USP35Q9P2H5 1018 aa7.31□□□□□ -1.24
SPTBN1-206ENST00000602898 BAZ1AQ9NRL2 1556 aaPredicted RBP7.31□□□□□ -1.24
SPTBN1-206ENST00000602898 STK24Q9Y6E0 443 aa7.31□□□□□ -1.24
SPTBN1-206ENST00000602898 APBB1O00213 710 aa7.3□□□□□ -1.24
SPTBN1-206ENST00000602898 CWC22Q9HCG8 908 aaKnown RBP7.3□□□□□ -1.24
SPTBN1-206ENST00000602898 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
SPTBN1-206ENST00000602898 PEG3Q9GZU2 1588 aa7.29□□□□□ -1.24
SPTBN1-206ENST00000602898 RIOK3O14730 519 aaKnown RBP7.29□□□□□ -1.24
SPTBN1-206ENST00000602898 ZEB1P37275 1124 aaPredicted RBP7.29□□□□□ -1.24
SPTBN1-206ENST00000602898 ZNF592Q92610 1267 aa7.29□□□□□ -1.24
SPTBN1-206ENST00000602898 WDR62O43379 1518 aa7.29□□□□□ -1.24
SPTBN1-206ENST00000602898 NEUROD1Q13562 356 aa7.28□□□□□ -1.24
SPTBN1-206ENST00000602898 GSE1Q14687 1217 aa7.28□□□□□ -1.24
SPTBN1-206ENST00000602898 TMED8Q6PL24 325 aaPredicted RBP7.28□□□□□ -1.24
SPTBN1-206ENST00000602898 ERCC6Q03468 1493 aa7.27□□□□□ -1.25
SPTBN1-206ENST00000602898 ZCCHC6Q5VYS8 1495 aaKnown RBP7.27□□□□□ -1.25
SPTBN1-206ENST00000602898 AEBP1Q8IUX7 1158 aa7.27□□□□□ -1.25
SPTBN1-206ENST00000602898 PHF12Q96QT6 1004 aa7.27□□□□□ -1.25
SPTBN1-206ENST00000602898 TRPC6Q9Y210 931 aa7.27□□□□□ -1.25
SPTBN1-206ENST00000602898 PCGF6Q9BYE7 350 aa7.27□□□□□ -1.25
SPTBN1-206ENST00000602898 FXR2P51116 673 aaKnown RBP eCLIP7.26□□□□□ -1.25
SPTBN1-206ENST00000602898 MAP3K13O43283 966 aa7.25□□□□□ -1.25
SPTBN1-206ENST00000602898 FAM177A1Q8N128 213 aaPredicted RBP7.25□□□□□ -1.25
SPTBN1-206ENST00000602898 CCDC61Q9Y6R9 512 aa7.25□□□□□ -1.25
SPTBN1-206ENST00000602898 IFNL1Q8IU54 200 aa7.24□□□□□ -1.25
SPTBN1-206ENST00000602898 ZNF526Q8TF50 670 aaPredicted RBP7.24□□□□□ -1.25
SPTBN1-206ENST00000602898 HS6ST3Q8IZP7 471 aa7.23□□□□□ -1.25
SPTBN1-206ENST00000602898 ANO8Q9HCE9 1232 aaPredicted RBP7.23□□□□□ -1.25
SPTBN1-206ENST00000602898 EVX2Q03828 476 aa7.23□□□□□ -1.25
SPTBN1-206ENST00000602898 BCCIPQ9P287 314 aaKnown RBP eCLIP7.23□□□□□ -1.25
SPTBN1-206ENST00000602898 RIMBP3CA6NJZ7 1639 aa7.22□□□□□ -1.25
SPTBN1-206ENST00000602898 RIMBP3BA6NNM3 1639 aa7.22□□□□□ -1.25
SPTBN1-206ENST00000602898 RIMBP3Q9UFD9 1639 aa7.22□□□□□ -1.25
SPTBN1-206ENST00000602898 PPM1GO15355 546 aaPredicted RBP7.22□□□□□ -1.25
SPTBN1-206ENST00000602898 GTPBP6O43824 516 aaPredicted RBP7.21□□□□□ -1.26
SPTBN1-206ENST00000602898 CERS3Q8IU89 383 aa7.21□□□□□ -1.26
SPTBN1-206ENST00000602898 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.21□□□□□ -1.26
SPTBN1-206ENST00000602898 CD44P16070 742 aaKnown RBP7.2□□□□□ -1.26
SPTBN1-206ENST00000602898 TRIM41Q8WV44 630 aa7.2□□□□□ -1.26
SPTBN1-206ENST00000602898 ZRANB1Q9UGI0 708 aa7.2□□□□□ -1.26
SPTBN1-206ENST00000602898 LMOD2Q6P5Q4 547 aa7.19□□□□□ -1.26
SPTBN1-206ENST00000602898 CCDC82Q8N4S0 544 aa7.19□□□□□ -1.26
SPTBN1-206ENST00000602898 KIF21AQ7Z4S6 1674 aa7.18□□□□□ -1.26
SPTBN1-206ENST00000602898 WDR97A6NE52 1622 aa7.18□□□□□ -1.26
SPTBN1-206ENST00000602898 VGFO15240 615 aaPredicted RBP7.17□□□□□ -1.26
SPTBN1-206ENST00000602898 SLC24A3Q9HC58 644 aa7.17□□□□□ -1.26
SPTBN1-206ENST00000602898 PRDM10Q9NQV6 1147 aa7.17□□□□□ -1.26
SPTBN1-206ENST00000602898 MFAP1P55081 439 aaKnown RBP7.17□□□□□ -1.26
SPTBN1-206ENST00000602898 RSPH4AQ5TD94 716 aa7.17□□□□□ -1.26
SPTBN1-206ENST00000602898 CABP2Q9NPB3 220 aa7.17□□□□□ -1.26
SPTBN1-206ENST00000602898 CADPS2Q86UW7 1296 aa7.17□□□□□ -1.26
SPTBN1-206ENST00000602898 PPP1R37O75864 691 aa7.16□□□□□ -1.26
SPTBN1-206ENST00000602898 PRDM2Q13029 1718 aa7.16□□□□□ -1.26
SPTBN1-206ENST00000602898 SCRIBQ14160 1630 aa7.15□□□□□ -1.26
SPTBN1-206ENST00000602898 ERICH6BQ5W0A0 696 aa7.15□□□□□ -1.27
SPTBN1-206ENST00000602898 EFCAB3Q8N7B9 438 aa7.15□□□□□ -1.27
SPTBN1-206ENST00000602898 MRC2Q9UBG0 1479 aa7.15□□□□□ -1.27
SPTBN1-206ENST00000602898 ARID4BQ4LE39 1312 aaPredicted RBP7.15□□□□□ -1.27
SPTBN1-206ENST00000602898 PSEN1P49768 467 aa7.14□□□□□ -1.27
SPTBN1-206ENST00000602898 TMCO4Q5TGY1 634 aa7.14□□□□□ -1.27
SPTBN1-206ENST00000602898 KIF12Q96FN5 646 aa7.14□□□□□ -1.27
SPTBN1-206ENST00000602898 TICAM2Q86XR7 235 aa7.14□□□□□ -1.27
SPTBN1-206ENST00000602898 NAP1L5Q96NT1 182 aaPredicted RBP7.14□□□□□ -1.27
SPTBN1-206ENST00000602898 MS4A3Q96HJ5 214 aa7.13□□□□□ -1.27
SPTBN1-206ENST00000602898 PSMD1Q99460 953 aa7.13□□□□□ -1.27
SPTBN1-206ENST00000602898 MFRPQ9BY79 579 aa7.13□□□□□ -1.27
SPTBN1-206ENST00000602898 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
SPTBN1-206ENST00000602898 PDS5BQ9NTI5 1447 aa7.13□□□□□ -1.27
SPTBN1-206ENST00000602898 PRDM16Q9HAZ2 1276 aa7.12□□□□□ -1.27
SPTBN1-206ENST00000602898 PHF8Q9UPP1 1060 aa7.12□□□□□ -1.27
SPTBN1-206ENST00000602898 KDM4AO75164 1064 aa7.12□□□□□ -1.27
SPTBN1-206ENST00000602898 GPBP1L1Q9HC44 474 aaPredicted RBP7.12□□□□□ -1.27
SPTBN1-206ENST00000602898 MKRN3Q13064 507 aaKnown RBP7.11□□□□□ -1.27
SPTBN1-206ENST00000602898 RSF1Q96T23 1441 aaPredicted RBP7.11□□□□□ -1.27
SPTBN1-206ENST00000602898 GALR2O43603 387 aaPredicted RBP7.11□□□□□ -1.27
SPTBN1-206ENST00000602898 HAX1O00165 279 aa7.1□□□□□ -1.27
SPTBN1-206ENST00000602898 CHRM1P11229 460 aaPredicted RBP7.1□□□□□ -1.27
SPTBN1-206ENST00000602898 IL27Q8NEV9 243 aa7.1□□□□□ -1.27
SPTBN1-206ENST00000602898 PDAP1Q13442 181 aaKnown RBP7.09□□□□□ -1.27
SPTBN1-206ENST00000602898 MYT1LQ9UL68 1186 aa7.09□□□□□ -1.27
SPTBN1-206ENST00000602898 ZNF316A6NFI3 1004 aaPredicted RBP7.08□□□□□ -1.28
SPTBN1-206ENST00000602898 ATAD2BQ9ULI0 1458 aa7.08□□□□□ -1.28
SPTBN1-206ENST00000602898 E9PSI1 815 aa7.08□□□□□ -1.28
SPTBN1-206ENST00000602898 PAK3O75914 559 aaPredicted RBP7.08□□□□□ -1.28
SPTBN1-206ENST00000602898 ZNF467Q7Z7K2 595 aaPredicted RBP7.07□□□□□ -1.28
SPTBN1-206ENST00000602898 SMARCA4P51532 1647 aa7.06□□□□□ -1.28
SPTBN1-206ENST00000602898 AAMPQ13685 434 aa7.06□□□□□ -1.28
SPTBN1-206ENST00000602898 ERCC6L2Q5T890 1561 aa7.06□□□□□ -1.28
SPTBN1-206ENST00000602898 ARHGEF11O15085 1522 aa7.06□□□□□ -1.28
SPTBN1-206ENST00000602898 TMEM106CQ9BVX2 250 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms