RNA–Protein interactions for RNA: ENST00000601668.5

PNPLA6-223, Transcript of patatin like phospholipase domain containing 6, human

TSL 3

Gene PNPLA6, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNPLA6-223	ENST00000601668	TIAM1	Q13009	1591 aa		32.02	■■■□□ 2.72
PNPLA6-223	ENST00000601668	EHBP1L1	Q8N3D4	1523 aa		32.01	■■■□□ 2.72
PNPLA6-223	ENST00000601668	MTUS2	Q5JR59	1369 aa		31.98	■■■□□ 2.71
PNPLA6-223	ENST00000601668	EFCAB2	Q5VUJ9	269 aa		31.98	■■■□□ 2.71
PNPLA6-223	ENST00000601668	ZMYM4	Q5VZL5	1548 aa		31.97	■■■□□ 2.71
PNPLA6-223	ENST00000601668	SCAPER	Q9BY12	1400 aa		31.97	■■■□□ 2.71
PNPLA6-223	ENST00000601668	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.95	■■■□□ 2.71
PNPLA6-223	ENST00000601668	POGZ	Q7Z3K3	1410 aa		31.94	■■■□□ 2.7
PNPLA6-223	ENST00000601668	KDM4F	A0A1W2PPD8	638 aa		31.93	■■■□□ 2.7
PNPLA6-223	ENST00000601668	ABCC1	P33527	1531 aa		31.91	■■■□□ 2.7
PNPLA6-223	ENST00000601668	ARHGEF40	Q8TER5	1519 aa		31.9	■■■□□ 2.7
PNPLA6-223	ENST00000601668	MAP3K1	Q13233	1512 aa		31.89	■■■□□ 2.7
PNPLA6-223	ENST00000601668	ARHGEF12	Q9NZN5	1544 aa		31.89	■■■□□ 2.7
PNPLA6-223	ENST00000601668	SAMD9L	Q8IVG5	1584 aa		31.88	■■■□□ 2.69
PNPLA6-223	ENST00000601668	ITSN2	Q9NZM3	1697 aa		31.88	■■■□□ 2.69
PNPLA6-223	ENST00000601668	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.85	■■■□□ 2.69
PNPLA6-223	ENST00000601668	KDM5C	P41229	1560 aa		31.85	■■■□□ 2.69
PNPLA6-223	ENST00000601668	LRRC9	Q6ZRR7	1453 aa		31.84	■■■□□ 2.69
PNPLA6-223	ENST00000601668	YEATS2	Q9ULM3	1422 aa		31.83	■■■□□ 2.69
PNPLA6-223	ENST00000601668	CCNB3	Q8WWL7	1395 aa		31.82	■■■□□ 2.69
PNPLA6-223	ENST00000601668	ZFYVE16	Q7Z3T8	1539 aa		31.81	■■■□□ 2.68
PNPLA6-223	ENST00000601668	SIGLEC1	Q9BZZ2	1709 aa		31.81	■■■□□ 2.68
PNPLA6-223	ENST00000601668	NCOA2	Q15596	1464 aa		31.81	■■■□□ 2.68
PNPLA6-223	ENST00000601668	ZNF518A	Q6AHZ1	1483 aa		31.8	■■■□□ 2.68
PNPLA6-223	ENST00000601668	MAGI2	Q86UL8	1455 aa		31.8	■■■□□ 2.68
PNPLA6-223	ENST00000601668	TRAPPC8	Q9Y2L5	1435 aa		31.79	■■■□□ 2.68
PNPLA6-223	ENST00000601668	KANK4	Q5T7N3	995 aa	Predicted RBP	31.77	■■■□□ 2.68
PNPLA6-223	ENST00000601668	SYCP2	Q9BX26	1530 aa		31.76	■■■□□ 2.68
PNPLA6-223	ENST00000601668	AFAP1	Q8N556	730 aa		31.76	■■■□□ 2.67
PNPLA6-223	ENST00000601668	HECW2	Q9P2P5	1572 aa		31.73	■■■□□ 2.67
PNPLA6-223	ENST00000601668	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.73	■■■□□ 2.67
PNPLA6-223	ENST00000601668	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.72	■■■□□ 2.67
PNPLA6-223	ENST00000601668	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.71	■■■□□ 2.67
PNPLA6-223	ENST00000601668	BCORL1	Q5H9F3	1711 aa		31.69	■■■□□ 2.66
PNPLA6-223	ENST00000601668	KIAA1107	Q9UPP5	1409 aa		31.68	■■■□□ 2.66
PNPLA6-223	ENST00000601668	ADAMTSL3	P82987	1691 aa		31.68	■■■□□ 2.66
PNPLA6-223	ENST00000601668	MLH3	Q9UHC1	1453 aa		31.68	■■■□□ 2.66
PNPLA6-223	ENST00000601668	KIDINS220	Q9ULH0	1771 aa		31.68	■■■□□ 2.66
PNPLA6-223	ENST00000601668	DIP2C	Q9Y2E4	1556 aa		31.68	■■■□□ 2.66
PNPLA6-223	ENST00000601668	ABCA6	Q8N139	1617 aa		31.67	■■■□□ 2.66
PNPLA6-223	ENST00000601668	PLEKHH2	Q8IVE3	1493 aa		31.66	■■■□□ 2.66
PNPLA6-223	ENST00000601668	ZNF644	Q9H582	1327 aa	Predicted RBP	31.66	■■■□□ 2.66
PNPLA6-223	ENST00000601668	ATP10A	O60312	1499 aa		31.64	■■■□□ 2.66
PNPLA6-223	ENST00000601668	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.63	■■■□□ 2.65
PNPLA6-223	ENST00000601668	MBD5	Q9P267	1494 aa		31.61	■■■□□ 2.65
PNPLA6-223	ENST00000601668	C9orf84	Q5VXU9	1444 aa		31.6	■■■□□ 2.65
PNPLA6-223	ENST00000601668	CAMSAP2	Q08AD1	1489 aa		31.59	■■■□□ 2.65
PNPLA6-223	ENST00000601668	INO80	Q9ULG1	1556 aa	Predicted RBP	31.58	■■■□□ 2.65
PNPLA6-223	ENST00000601668	RERE	Q9P2R6	1566 aa		31.57	■■■□□ 2.64
PNPLA6-223	ENST00000601668	MADD	Q8WXG6	1647 aa		31.57	■■■□□ 2.64
PNPLA6-223	ENST00000601668	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.53	■■■□□ 2.64
PNPLA6-223	ENST00000601668	ATP7A	Q04656	1500 aa		31.53	■■■□□ 2.64
PNPLA6-223	ENST00000601668	MYOM3	Q5VTT5	1437 aa		31.52	■■■□□ 2.64
PNPLA6-223	ENST00000601668	APLP2	Q06481	763 aa		31.52	■■■□□ 2.64
PNPLA6-223	ENST00000601668	SPAG9	O60271	1321 aa	Known RBP	31.49	■■■□□ 2.63
PNPLA6-223	ENST00000601668	RIMS1	Q86UR5	1692 aa	Known RBP	31.47	■■■□□ 2.63
PNPLA6-223	ENST00000601668	ARHGEF5	Q12774	1597 aa		31.47	■■■□□ 2.63
PNPLA6-223	ENST00000601668	MYT1L	Q9UL68	1186 aa		31.46	■■■□□ 2.63
PNPLA6-223	ENST00000601668	MIA2	Q96PC5	1412 aa		31.46	■■■□□ 2.63
PNPLA6-223	ENST00000601668	CCDC141	Q6ZP82	1450 aa		31.45	■■■□□ 2.62
PNPLA6-223	ENST00000601668	AGL	P35573	1532 aa		31.44	■■■□□ 2.62
PNPLA6-223	ENST00000601668	PTPRM	P28827	1452 aa		31.44	■■■□□ 2.62
PNPLA6-223	ENST00000601668	FER1L4	A9Z1Z3	1794 aa		31.43	■■■□□ 2.62
PNPLA6-223	ENST00000601668	PLXNC1	O60486	1568 aa		31.41	■■■□□ 2.62
PNPLA6-223	ENST00000601668	ADGB	Q8N7X0	1667 aa		31.39	■■■□□ 2.62
PNPLA6-223	ENST00000601668	MLEC	Q14165	292 aa		31.38	■■■□□ 2.61
PNPLA6-223	ENST00000601668	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.38	■■■□□ 2.61
PNPLA6-223	ENST00000601668	PTPN23	Q9H3S7	1636 aa		31.38	■■■□□ 2.61
PNPLA6-223	ENST00000601668	A2M	P01023	1474 aa		31.34	■■■□□ 2.61
PNPLA6-223	ENST00000601668	FGD6	Q6ZV73	1430 aa		31.34	■■■□□ 2.61
PNPLA6-223	ENST00000601668	MAST1	Q9Y2H9	1570 aa		31.32	■■■□□ 2.6
PNPLA6-223	ENST00000601668	TCOF1	Q13428	1488 aa	Known RBP	31.32	■■■□□ 2.6
PNPLA6-223	ENST00000601668	RSPH4A	Q5TD94	716 aa		31.31	■■■□□ 2.6
PNPLA6-223	ENST00000601668	CROCC2	H7BZ55	1655 aa		31.29	■■■□□ 2.6
PNPLA6-223	ENST00000601668	DNMT1	P26358	1616 aa	Known RBP	31.24	■■■□□ 2.59
PNPLA6-223	ENST00000601668	ABCC5	O15440	1437 aa		31.23	■■■□□ 2.59
PNPLA6-223	ENST00000601668	DHX29	Q7Z478	1369 aa	Known RBP	31.2	■■■□□ 2.59
PNPLA6-223	ENST00000601668	SHANK2	Q9UPX8	1470 aa		31.18	■■■□□ 2.58
PNPLA6-223	ENST00000601668	DAPK1	P53355	1430 aa		31.17	■■■□□ 2.58
PNPLA6-223	ENST00000601668	C3	P01024	1663 aa		31.17	■■■□□ 2.58
PNPLA6-223	ENST00000601668	TSPY4	P0CV99	314 aa		31.17	■■■□□ 2.58
PNPLA6-223	ENST00000601668	TSPY10	P0CW01	314 aa		31.17	■■■□□ 2.58
PNPLA6-223	ENST00000601668	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.14	■■■□□ 2.58
PNPLA6-223	ENST00000601668	MROH2A	A6NES4	1674 aa		31.13	■■■□□ 2.57
PNPLA6-223	ENST00000601668	CLTC	Q00610	1675 aa	Known RBP	31.12	■■■□□ 2.57
PNPLA6-223	ENST00000601668	CEBPA	P49715	358 aa	Predicted RBP	31.1	■■■□□ 2.57
PNPLA6-223	ENST00000601668	PLPPR3	Q6T4P5	718 aa		31.1	■■■□□ 2.57
PNPLA6-223	ENST00000601668	LMTK3	Q96Q04	1460 aa		31.08	■■■□□ 2.57
PNPLA6-223	ENST00000601668	CNTLN	Q9NXG0	1405 aa		31.07	■■■□□ 2.57
PNPLA6-223	ENST00000601668	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.06	■■■□□ 2.56
PNPLA6-223	ENST00000601668	RNF17	Q9BXT8	1623 aa	Known RBP	31.05	■■■□□ 2.56
PNPLA6-223	ENST00000601668	GGT6	Q6P531	493 aa		31.04	■■■□□ 2.56
PNPLA6-223	ENST00000601668	DUOX2	Q9NRD8	1548 aa		31.03	■■■□□ 2.56
PNPLA6-223	ENST00000601668	KIF3B	O15066	747 aa		31.03	■■■□□ 2.56
PNPLA6-223	ENST00000601668	PREX1	Q8TCU6	1659 aa		31.01	■■■□□ 2.55
PNPLA6-223	ENST00000601668	FAM50A	Q14320	339 aa	Known RBP	31.01	■■■□□ 2.55
PNPLA6-223	ENST00000601668	MROH1	Q8NDA8	1641 aa		31.01	■■■□□ 2.55
PNPLA6-223	ENST00000601668	KIF15	Q9NS87	1388 aa		31	■■■□□ 2.55
PNPLA6-223	ENST00000601668	ADGRL2	O95490	1459 aa		30.99	■■■□□ 2.55
PNPLA6-223	ENST00000601668	SETD1B	Q9UPS6	1966 aa	Known RBP	30.98	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms