RNA–Protein interactions for RNA: ENST00000601522.1

TMEM143-213, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-213ENST00000601522 FRMPD1Q5SYB0 1578 aa32.79■■■□□ 2.84
TMEM143-213ENST00000601522 RICTORQ6R327 1708 aa32.76■■■□□ 2.83
TMEM143-213ENST00000601522 MAGI2Q86UL8 1455 aa32.75■■■□□ 2.83
TMEM143-213ENST00000601522 POGZQ7Z3K3 1410 aa32.75■■■□□ 2.83
TMEM143-213ENST00000601522 CCNB3Q8WWL7 1395 aa32.73■■■□□ 2.83
TMEM143-213ENST00000601522 PREX2Q70Z35 1606 aa32.72■■■□□ 2.83
TMEM143-213ENST00000601522 ZMYM4Q5VZL5 1548 aa32.71■■■□□ 2.83
TMEM143-213ENST00000601522 EHBP1L1Q8N3D4 1523 aa32.71■■■□□ 2.83
TMEM143-213ENST00000601522 CDC42BPBQ9Y5S2 1711 aa32.71■■■□□ 2.83
TMEM143-213ENST00000601522 ZNF518AQ6AHZ1 1483 aa32.69■■■□□ 2.82
TMEM143-213ENST00000601522 GPATCH8Q9UKJ3 1502 aaKnown RBP32.69■■■□□ 2.82
TMEM143-213ENST00000601522 CFDP1Q9UEE9 299 aaPredicted RBP32.69■■■□□ 2.82
TMEM143-213ENST00000601522 ZNF777Q9ULD5 760 aaPredicted RBP32.68■■■□□ 2.82
TMEM143-213ENST00000601522 ARID4BQ4LE39 1312 aaPredicted RBP32.68■■■□□ 2.82
TMEM143-213ENST00000601522 AFAP1Q8N556 730 aa32.66■■■□□ 2.82
TMEM143-213ENST00000601522 MYT1LQ9UL68 1186 aa32.65■■■□□ 2.82
TMEM143-213ENST00000601522 CDC42BPAQ5VT25 1732 aa32.65■■■□□ 2.82
TMEM143-213ENST00000601522 APLP2Q06481 763 aa32.64■■■□□ 2.82
TMEM143-213ENST00000601522 ZFYVE16Q7Z3T8 1539 aa32.64■■■□□ 2.82
TMEM143-213ENST00000601522 ARHGEF40Q8TER5 1519 aa32.63■■■□□ 2.81
TMEM143-213ENST00000601522 TIAM1Q13009 1591 aa32.62■■■□□ 2.81
TMEM143-213ENST00000601522 MAP3K1Q13233 1512 aa32.59■■■□□ 2.81
TMEM143-213ENST00000601522 YEATS2Q9ULM3 1422 aa32.58■■■□□ 2.81
TMEM143-213ENST00000601522 ABCC1P33527 1531 aa32.57■■■□□ 2.8
TMEM143-213ENST00000601522 PLEKHH2Q8IVE3 1493 aa32.57■■■□□ 2.8
TMEM143-213ENST00000601522 ATP10AO60312 1499 aa32.54■■■□□ 2.8
TMEM143-213ENST00000601522 KDM5CP41229 1560 aa32.54■■■□□ 2.8
TMEM143-213ENST00000601522 KIAA1107Q9UPP5 1409 aa32.54■■■□□ 2.8
TMEM143-213ENST00000601522 LRRC9Q6ZRR7 1453 aa32.54■■■□□ 2.8
TMEM143-213ENST00000601522 TRAPPC8Q9Y2L5 1435 aa32.53■■■□□ 2.8
TMEM143-213ENST00000601522 SUPT6HQ7KZ85 1726 aaKnown RBP32.53■■■□□ 2.8
TMEM143-213ENST00000601522 ARHGEF12Q9NZN5 1544 aa32.52■■■□□ 2.8
TMEM143-213ENST00000601522 HNRNPMP52272 730 aaKnown RBP eCLIP32.52■■■□□ 2.8
TMEM143-213ENST00000601522 NCOA2Q15596 1464 aa32.51■■■□□ 2.79
TMEM143-213ENST00000601522 MLH3Q9UHC1 1453 aa32.51■■■□□ 2.79
TMEM143-213ENST00000601522 SAMD9LQ8IVG5 1584 aa32.49■■■□□ 2.79
TMEM143-213ENST00000601522 ITSN2Q9NZM3 1697 aa32.49■■■□□ 2.79
TMEM143-213ENST00000601522 C9orf84Q5VXU9 1444 aa32.48■■■□□ 2.79
TMEM143-213ENST00000601522 HECW2Q9P2P5 1572 aa32.46■■■□□ 2.79
TMEM143-213ENST00000601522 KANK4Q5T7N3 995 aaPredicted RBP32.45■■■□□ 2.79
TMEM143-213ENST00000601522 SPAG9O60271 1321 aaKnown RBP32.45■■■□□ 2.78
TMEM143-213ENST00000601522 SYCP2Q9BX26 1530 aa32.44■■■□□ 2.78
TMEM143-213ENST00000601522 BCORL1Q5H9F3 1711 aa32.43■■■□□ 2.78
TMEM143-213ENST00000601522 RSPH4AQ5TD94 716 aa32.42■■■□□ 2.78
TMEM143-213ENST00000601522 ADAMTSL3P82987 1691 aa32.41■■■□□ 2.78
TMEM143-213ENST00000601522 ZNF644Q9H582 1327 aaPredicted RBP32.41■■■□□ 2.78
TMEM143-213ENST00000601522 MLECQ14165 292 aa32.37■■■□□ 2.77
TMEM143-213ENST00000601522 DIP2CQ9Y2E4 1556 aa32.34■■■□□ 2.77
TMEM143-213ENST00000601522 PTPRMP28827 1452 aa32.33■■■□□ 2.77
TMEM143-213ENST00000601522 REREQ9P2R6 1566 aa32.32■■■□□ 2.77
TMEM143-213ENST00000601522 MBD5Q9P267 1494 aa32.31■■■□□ 2.76
TMEM143-213ENST00000601522 KIDINS220Q9ULH0 1771 aa32.3■■■□□ 2.76
TMEM143-213ENST00000601522 ABCA6Q8N139 1617 aa32.29■■■□□ 2.76
TMEM143-213ENST00000601522 MADDQ8WXG6 1647 aa32.29■■■□□ 2.76
TMEM143-213ENST00000601522 CAMSAP2Q08AD1 1489 aa32.28■■■□□ 2.76
TMEM143-213ENST00000601522 MIA2Q96PC5 1412 aa32.27■■■□□ 2.76
TMEM143-213ENST00000601522 MYOM3Q5VTT5 1437 aa32.26■■■□□ 2.76
TMEM143-213ENST00000601522 ATP7AQ04656 1500 aa32.26■■■□□ 2.76
TMEM143-213ENST00000601522 TSPY4P0CV99 314 aa32.26■■■□□ 2.75
TMEM143-213ENST00000601522 TSPY10P0CW01 314 aa32.26■■■□□ 2.75
TMEM143-213ENST00000601522 SIGLEC1Q9BZZ2 1709 aa32.26■■■□□ 2.75
TMEM143-213ENST00000601522 AGLP35573 1532 aa32.25■■■□□ 2.75
TMEM143-213ENST00000601522 RTEL1-TNFRSF6BF6WH68 1400 aa32.25■■■□□ 2.75
TMEM143-213ENST00000601522 ESF1Q9H501 851 aaKnown RBP32.22■■■□□ 2.75
TMEM143-213ENST00000601522 CCDC141Q6ZP82 1450 aa32.22■■■□□ 2.75
TMEM143-213ENST00000601522 INO80Q9ULG1 1556 aaPredicted RBP32.19■■■□□ 2.74
TMEM143-213ENST00000601522 RIMS1Q86UR5 1692 aaKnown RBP32.18■■■□□ 2.74
TMEM143-213ENST00000601522 A2MP01023 1474 aa32.16■■■□□ 2.74
TMEM143-213ENST00000601522 ARHGEF5Q12774 1597 aa32.15■■■□□ 2.74
TMEM143-213ENST00000601522 FER1L4A9Z1Z3 1794 aa32.14■■■□□ 2.74
TMEM143-213ENST00000601522 PLPPR3Q6T4P5 718 aa32.13■■■□□ 2.73
TMEM143-213ENST00000601522 DHX29Q7Z478 1369 aaKnown RBP32.09■■■□□ 2.73
TMEM143-213ENST00000601522 ADGBQ8N7X0 1667 aa32.08■■■□□ 2.73
TMEM143-213ENST00000601522 PPP6R1Q9UPN7 881 aa32.07■■■□□ 2.72
TMEM143-213ENST00000601522 CNTLNQ9NXG0 1405 aa32.07■■■□□ 2.72
TMEM143-213ENST00000601522 PLXNC1O60486 1568 aa32.05■■■□□ 2.72
TMEM143-213ENST00000601522 GGT6Q6P531 493 aa32.04■■■□□ 2.72
TMEM143-213ENST00000601522 FGD6Q6ZV73 1430 aa32.03■■■□□ 2.72
TMEM143-213ENST00000601522 CEBPAP49715 358 aaPredicted RBP32.01■■■□□ 2.71
TMEM143-213ENST00000601522 PTPN23Q9H3S7 1636 aa32■■■□□ 2.71
TMEM143-213ENST00000601522 KIF3BO15066 747 aa31.97■■■□□ 2.71
TMEM143-213ENST00000601522 MAST1Q9Y2H9 1570 aa31.97■■■□□ 2.71
TMEM143-213ENST00000601522 TCOF1Q13428 1488 aaKnown RBP31.97■■■□□ 2.71
TMEM143-213ENST00000601522 ABCC5O15440 1437 aa31.92■■■□□ 2.7
TMEM143-213ENST00000601522 ZMYM3Q14202 1370 aa31.91■■■□□ 2.7
TMEM143-213ENST00000601522 FAM50AQ14320 339 aaKnown RBP31.9■■■□□ 2.7
TMEM143-213ENST00000601522 LMTK3Q96Q04 1460 aa31.89■■■□□ 2.7
TMEM143-213ENST00000601522 SHANK2Q9UPX8 1470 aa31.89■■■□□ 2.7
TMEM143-213ENST00000601522 DAPK1P53355 1430 aa31.88■■■□□ 2.69
TMEM143-213ENST00000601522 MROH2AA6NES4 1674 aa31.85■■■□□ 2.69
TMEM143-213ENST00000601522 SETD1BQ9UPS6 1966 aaKnown RBP31.84■■■□□ 2.69
TMEM143-213ENST00000601522 C3P01024 1663 aa31.83■■■□□ 2.69
TMEM143-213ENST00000601522 DNMT1P26358 1616 aaKnown RBP31.83■■■□□ 2.69
TMEM143-213ENST00000601522 WASHC2CQ9Y4E1 1318 aa31.83■■■□□ 2.69
TMEM143-213ENST00000601522 RRP7BPQ9NSQ0 103 aa31.82■■■□□ 2.68
TMEM143-213ENST00000601522 UHRF1BP1Q6BDS2 1440 aa31.82■■■□□ 2.68
TMEM143-213ENST00000601522 ANKRD30AQ9BXX3 1397 aa31.81■■■□□ 2.68
TMEM143-213ENST00000601522 KIF15Q9NS87 1388 aa31.81■■■□□ 2.68
TMEM143-213ENST00000601522 DUOX2Q9NRD8 1548 aa31.8■■■□□ 2.68
TMEM143-213ENST00000601522 NPATQ14207 1427 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms