RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
LINC00649-212ENST00000601471 ADGRL1O94910 1474 aa15.34■□□□□ 0.05
LINC00649-212ENST00000601471 ARHGAP5Q13017 1502 aa15.33■□□□□ 0.05
LINC00649-212ENST00000601471 MAP3K1Q13233 1512 aa15.33■□□□□ 0.05
LINC00649-212ENST00000601471 POGZQ7Z3K3 1410 aa15.33■□□□□ 0.04
LINC00649-212ENST00000601471 ARHGEF40Q8TER5 1519 aa15.32■□□□□ 0.04
LINC00649-212ENST00000601471 ABCC1P33527 1531 aa15.31■□□□□ 0.04
LINC00649-212ENST00000601471 GPATCH8Q9UKJ3 1502 aaKnown RBP15.31■□□□□ 0.04
LINC00649-212ENST00000601471 KDM5CP41229 1560 aa15.31■□□□□ 0.04
LINC00649-212ENST00000601471 MAGI2Q86UL8 1455 aa15.29■□□□□ 0.04
LINC00649-212ENST00000601471 MTUS2Q5JR59 1369 aa15.29■□□□□ 0.04
LINC00649-212ENST00000601471 RAPGEF3O95398 923 aa15.29■□□□□ 0.04
LINC00649-212ENST00000601471 EFCAB2Q5VUJ9 269 aa15.29■□□□□ 0.04
LINC00649-212ENST00000601471 ITSN2Q9NZM3 1697 aa15.28■□□□□ 0.04
LINC00649-212ENST00000601471 SCAPERQ9BY12 1400 aa15.28■□□□□ 0.04
LINC00649-212ENST00000601471 SAMD9LQ8IVG5 1584 aa15.28■□□□□ 0.04
LINC00649-212ENST00000601471 ZNF518AQ6AHZ1 1483 aa15.27■□□□□ 0.04
LINC00649-212ENST00000601471 SUPT6HQ7KZ85 1726 aaKnown RBP15.27■□□□□ 0.04
LINC00649-212ENST00000601471 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.03
LINC00649-212ENST00000601471 ARHGEF12Q9NZN5 1544 aa15.26■□□□□ 0.03
LINC00649-212ENST00000601471 ZFYVE16Q7Z3T8 1539 aa15.25■□□□□ 0.03
LINC00649-212ENST00000601471 KDM4FA0A1W2PPD8 638 aa15.24■□□□□ 0.03
LINC00649-212ENST00000601471 NCOA2Q15596 1464 aa15.24■□□□□ 0.03
LINC00649-212ENST00000601471 HECW2Q9P2P5 1572 aa15.24■□□□□ 0.03
LINC00649-212ENST00000601471 SIGLEC1Q9BZZ2 1709 aa15.23■□□□□ 0.03
LINC00649-212ENST00000601471 YEATS2Q9ULM3 1422 aa15.22■□□□□ 0.03
LINC00649-212ENST00000601471 KIAA1107Q9UPP5 1409 aa15.22■□□□□ 0.03
LINC00649-212ENST00000601471 CCNB3Q8WWL7 1395 aa15.22■□□□□ 0.03
LINC00649-212ENST00000601471 MLH3Q9UHC1 1453 aa15.21■□□□□ 0.03
LINC00649-212ENST00000601471 SYCP2Q9BX26 1530 aa15.21■□□□□ 0.03
LINC00649-212ENST00000601471 PLEKHH2Q8IVE3 1493 aa15.2■□□□□ 0.02
LINC00649-212ENST00000601471 REREQ9P2R6 1566 aa15.2■□□□□ 0.02
LINC00649-212ENST00000601471 TRAPPC8Q9Y2L5 1435 aa15.2■□□□□ 0.02
LINC00649-212ENST00000601471 ADAMTSL3P82987 1691 aa15.19■□□□□ 0.02
LINC00649-212ENST00000601471 DIP2CQ9Y2E4 1556 aa15.19■□□□□ 0.02
LINC00649-212ENST00000601471 ABCA6Q8N139 1617 aa15.18■□□□□ 0.02
LINC00649-212ENST00000601471 BCORL1Q5H9F3 1711 aa15.18■□□□□ 0.02
LINC00649-212ENST00000601471 KIDINS220Q9ULH0 1771 aa15.18■□□□□ 0.02
LINC00649-212ENST00000601471 INO80Q9ULG1 1556 aaPredicted RBP15.17■□□□□ 0.02
LINC00649-212ENST00000601471 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
LINC00649-212ENST00000601471 ATP10AO60312 1499 aa15.15■□□□□ 0.02
LINC00649-212ENST00000601471 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
LINC00649-212ENST00000601471 AFAP1Q8N556 730 aa15.15■□□□□ 0.02
LINC00649-212ENST00000601471 CFDP1Q9UEE9 299 aaPredicted RBP15.15■□□□□ 0.02
LINC00649-212ENST00000601471 C9orf84Q5VXU9 1444 aa15.15■□□□□ 0.02
LINC00649-212ENST00000601471 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
LINC00649-212ENST00000601471 ATP7AQ04656 1500 aa15.12■□□□□ 0.01
LINC00649-212ENST00000601471 ARHGEF5Q12774 1597 aa15.11■□□□□ 0.01
LINC00649-212ENST00000601471 MYOM3Q5VTT5 1437 aa15.11■□□□□ 0.01
LINC00649-212ENST00000601471 MADDQ8WXG6 1647 aa15.11■□□□□ 0.01
LINC00649-212ENST00000601471 AGLP35573 1532 aa15.11■□□□□ 0.01
LINC00649-212ENST00000601471 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
LINC00649-212ENST00000601471 MIA2Q96PC5 1412 aa15.1■□□□□ 0.01
LINC00649-212ENST00000601471 ZNF644Q9H582 1327 aaPredicted RBP15.1■□□□□ 0.01
LINC00649-212ENST00000601471 ZNF777Q9ULD5 760 aaPredicted RBP15.09■□□□□ 0.01
LINC00649-212ENST00000601471 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0.01
LINC00649-212ENST00000601471 HNRNPMP52272 730 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00649-212ENST00000601471 RTEL1-TNFRSF6BF6WH68 1400 aa15.07■□□□□ 0
LINC00649-212ENST00000601471 ADGBQ8N7X0 1667 aa15.06■□□□□ 0
LINC00649-212ENST00000601471 PTPRMP28827 1452 aa15.06■□□□□ 0
LINC00649-212ENST00000601471 FER1L4A9Z1Z3 1794 aa15.06■□□□□ 0
LINC00649-212ENST00000601471 SPAG9O60271 1321 aaKnown RBP15.05■□□□□ -0
LINC00649-212ENST00000601471 MAST1Q9Y2H9 1570 aa15.05■□□□□ -0
LINC00649-212ENST00000601471 RIMS1Q86UR5 1692 aaKnown RBP15.04■□□□□ -0
LINC00649-212ENST00000601471 APLP2Q06481 763 aa15.04■□□□□ -0
LINC00649-212ENST00000601471 TCOF1Q13428 1488 aaKnown RBP15.03■□□□□ -0
LINC00649-212ENST00000601471 CROCC2H7BZ55 1655 aa15.03■□□□□ -0
LINC00649-212ENST00000601471 PTPN23Q9H3S7 1636 aa15.03■□□□□ -0
LINC00649-212ENST00000601471 FGD6Q6ZV73 1430 aa15.02■□□□□ -0
LINC00649-212ENST00000601471 ARID4BQ4LE39 1312 aaPredicted RBP15.02■□□□□ -0
LINC00649-212ENST00000601471 RSPH4AQ5TD94 716 aa15.02■□□□□ -0
LINC00649-212ENST00000601471 A2MP01023 1474 aa15.01□□□□□ -0.01
LINC00649-212ENST00000601471 SHANK2Q9UPX8 1470 aa15□□□□□ -0.01
LINC00649-212ENST00000601471 DNMT1P26358 1616 aaKnown RBP14.99□□□□□ -0.01
LINC00649-212ENST00000601471 MROH2AA6NES4 1674 aa14.96□□□□□ -0.01
LINC00649-212ENST00000601471 MYT1LQ9UL68 1186 aa14.95□□□□□ -0.02
LINC00649-212ENST00000601471 ABCC5O15440 1437 aa14.94□□□□□ -0.02
LINC00649-212ENST00000601471 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
LINC00649-212ENST00000601471 FAM135AQ9P2D6 1515 aa14.93□□□□□ -0.02
LINC00649-212ENST00000601471 EIF2AK4Q9P2K8 1649 aaKnown RBP14.93□□□□□ -0.02
LINC00649-212ENST00000601471 C3P01024 1663 aa14.93□□□□□ -0.02
LINC00649-212ENST00000601471 DAPK1P53355 1430 aa14.92□□□□□ -0.02
LINC00649-212ENST00000601471 CNTLNQ9NXG0 1405 aa14.92□□□□□ -0.02
LINC00649-212ENST00000601471 MLECQ14165 292 aa14.92□□□□□ -0.02
LINC00649-212ENST00000601471 RNF17Q9BXT8 1623 aaKnown RBP14.92□□□□□ -0.02
LINC00649-212ENST00000601471 LMTK3Q96Q04 1460 aa14.9□□□□□ -0.02
LINC00649-212ENST00000601471 TSPY4P0CV99 314 aa14.9□□□□□ -0.02
LINC00649-212ENST00000601471 TSPY10P0CW01 314 aa14.9□□□□□ -0.02
LINC00649-212ENST00000601471 CLTCQ00610 1675 aaKnown RBP14.89□□□□□ -0.03
LINC00649-212ENST00000601471 ADGRL2O95490 1459 aa14.89□□□□□ -0.03
LINC00649-212ENST00000601471 MROH1Q8NDA8 1641 aa14.88□□□□□ -0.03
LINC00649-212ENST00000601471 DUOX2Q9NRD8 1548 aa14.88□□□□□ -0.03
LINC00649-212ENST00000601471 PREX1Q8TCU6 1659 aa14.88□□□□□ -0.03
LINC00649-212ENST00000601471 KDM5DQ9BY66 1539 aa14.87□□□□□ -0.03
LINC00649-212ENST00000601471 DEPDC5O75140 1603 aa14.86□□□□□ -0.03
LINC00649-212ENST00000601471 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
LINC00649-212ENST00000601471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.85□□□□□ -0.03
LINC00649-212ENST00000601471 ERBINQ96RT1 1412 aa14.85□□□□□ -0.03
LINC00649-212ENST00000601471 ZC3H13Q5T200 1668 aaKnown RBP14.85□□□□□ -0.03
LINC00649-212ENST00000601471 KIF15Q9NS87 1388 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms