RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	EHBP1L1	Q8N3D4	1523 aa		32.15	■■■□□ 2.74
GTPBP3-223	ENST00000600995	FRMPD1	Q5SYB0	1578 aa		32.14	■■■□□ 2.74
GTPBP3-223	ENST00000600995	CDC42BPA	Q5VT25	1732 aa		32.14	■■■□□ 2.74
GTPBP3-223	ENST00000600995	TIAM1	Q13009	1591 aa		32.11	■■■□□ 2.73
GTPBP3-223	ENST00000600995	SCAPER	Q9BY12	1400 aa		32.11	■■■□□ 2.73
GTPBP3-223	ENST00000600995	MAP3K1	Q13233	1512 aa		32.1	■■■□□ 2.73
GTPBP3-223	ENST00000600995	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.06	■■■□□ 2.72
GTPBP3-223	ENST00000600995	CCNB3	Q8WWL7	1395 aa		32.05	■■■□□ 2.72
GTPBP3-223	ENST00000600995	POGZ	Q7Z3K3	1410 aa		32.04	■■■□□ 2.72
GTPBP3-223	ENST00000600995	ZMYM4	Q5VZL5	1548 aa		32.04	■■■□□ 2.72
GTPBP3-223	ENST00000600995	MAGI2	Q86UL8	1455 aa		32.02	■■■□□ 2.72
GTPBP3-223	ENST00000600995	SUPT6H	Q7KZ85	1726 aa	Known RBP	32	■■■□□ 2.71
GTPBP3-223	ENST00000600995	LRRC9	Q6ZRR7	1453 aa		31.99	■■■□□ 2.71
GTPBP3-223	ENST00000600995	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.99	■■■□□ 2.71
GTPBP3-223	ENST00000600995	ZNF518A	Q6AHZ1	1483 aa		31.98	■■■□□ 2.71
GTPBP3-223	ENST00000600995	KDM4F	A0A1W2PPD8	638 aa		31.97	■■■□□ 2.71
GTPBP3-223	ENST00000600995	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.97	■■■□□ 2.71
GTPBP3-223	ENST00000600995	ABCC1	P33527	1531 aa		31.96	■■■□□ 2.71
GTPBP3-223	ENST00000600995	ITSN2	Q9NZM3	1697 aa		31.96	■■■□□ 2.71
GTPBP3-223	ENST00000600995	APLP2	Q06481	763 aa		31.95	■■■□□ 2.71
GTPBP3-223	ENST00000600995	ARHGEF40	Q8TER5	1519 aa		31.94	■■■□□ 2.7
GTPBP3-223	ENST00000600995	NCOA2	Q15596	1464 aa		31.93	■■■□□ 2.7
GTPBP3-223	ENST00000600995	ZFYVE16	Q7Z3T8	1539 aa		31.91	■■■□□ 2.7
GTPBP3-223	ENST00000600995	KDM5C	P41229	1560 aa		31.91	■■■□□ 2.7
GTPBP3-223	ENST00000600995	SAMD9L	Q8IVG5	1584 aa		31.91	■■■□□ 2.7
GTPBP3-223	ENST00000600995	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.91	■■■□□ 2.7
GTPBP3-223	ENST00000600995	PLEKHH2	Q8IVE3	1493 aa		31.91	■■■□□ 2.7
GTPBP3-223	ENST00000600995	AFAP1	Q8N556	730 aa		31.9	■■■□□ 2.7
GTPBP3-223	ENST00000600995	ARHGEF12	Q9NZN5	1544 aa		31.9	■■■□□ 2.7
GTPBP3-223	ENST00000600995	KIAA1107	Q9UPP5	1409 aa		31.89	■■■□□ 2.7
GTPBP3-223	ENST00000600995	KANK4	Q5T7N3	995 aa	Predicted RBP	31.88	■■■□□ 2.69
GTPBP3-223	ENST00000600995	YEATS2	Q9ULM3	1422 aa		31.85	■■■□□ 2.69
GTPBP3-223	ENST00000600995	TRAPPC8	Q9Y2L5	1435 aa		31.85	■■■□□ 2.69
GTPBP3-223	ENST00000600995	MLH3	Q9UHC1	1453 aa		31.84	■■■□□ 2.69
GTPBP3-223	ENST00000600995	HECW2	Q9P2P5	1572 aa		31.82	■■■□□ 2.68
GTPBP3-223	ENST00000600995	SYCP2	Q9BX26	1530 aa		31.81	■■■□□ 2.68
GTPBP3-223	ENST00000600995	ATP10A	O60312	1499 aa		31.8	■■■□□ 2.68
GTPBP3-223	ENST00000600995	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.79	■■■□□ 2.68
GTPBP3-223	ENST00000600995	MYT1L	Q9UL68	1186 aa		31.77	■■■□□ 2.68
GTPBP3-223	ENST00000600995	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.76	■■■□□ 2.68
GTPBP3-223	ENST00000600995	C9orf84	Q5VXU9	1444 aa		31.75	■■■□□ 2.67
GTPBP3-223	ENST00000600995	BCORL1	Q5H9F3	1711 aa		31.74	■■■□□ 2.67
GTPBP3-223	ENST00000600995	ZNF644	Q9H582	1327 aa	Predicted RBP	31.74	■■■□□ 2.67
GTPBP3-223	ENST00000600995	KIDINS220	Q9ULH0	1771 aa		31.72	■■■□□ 2.67
GTPBP3-223	ENST00000600995	ADAMTSL3	P82987	1691 aa		31.71	■■■□□ 2.67
GTPBP3-223	ENST00000600995	RSPH4A	Q5TD94	716 aa		31.71	■■■□□ 2.67
GTPBP3-223	ENST00000600995	MBD5	Q9P267	1494 aa		31.71	■■■□□ 2.67
GTPBP3-223	ENST00000600995	DIP2C	Q9Y2E4	1556 aa		31.7	■■■□□ 2.67
GTPBP3-223	ENST00000600995	SPAG9	O60271	1321 aa	Known RBP	31.7	■■■□□ 2.66
GTPBP3-223	ENST00000600995	RERE	Q9P2R6	1566 aa		31.69	■■■□□ 2.66
GTPBP3-223	ENST00000600995	MIA2	Q96PC5	1412 aa		31.69	■■■□□ 2.66
GTPBP3-223	ENST00000600995	MYOM3	Q5VTT5	1437 aa		31.68	■■■□□ 2.66
GTPBP3-223	ENST00000600995	CAMSAP2	Q08AD1	1489 aa		31.68	■■■□□ 2.66
GTPBP3-223	ENST00000600995	ABCA6	Q8N139	1617 aa		31.67	■■■□□ 2.66
GTPBP3-223	ENST00000600995	SIGLEC1	Q9BZZ2	1709 aa		31.67	■■■□□ 2.66
GTPBP3-223	ENST00000600995	ATP7A	Q04656	1500 aa		31.62	■■■□□ 2.65
GTPBP3-223	ENST00000600995	INO80	Q9ULG1	1556 aa	Predicted RBP	31.62	■■■□□ 2.65
GTPBP3-223	ENST00000600995	ARHGEF5	Q12774	1597 aa		31.6	■■■□□ 2.65
GTPBP3-223	ENST00000600995	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.6	■■■□□ 2.65
GTPBP3-223	ENST00000600995	CCDC141	Q6ZP82	1450 aa		31.59	■■■□□ 2.65
GTPBP3-223	ENST00000600995	AGL	P35573	1532 aa		31.58	■■■□□ 2.65
GTPBP3-223	ENST00000600995	MADD	Q8WXG6	1647 aa		31.57	■■■□□ 2.64
GTPBP3-223	ENST00000600995	TSPY4	P0CV99	314 aa		31.52	■■■□□ 2.64
GTPBP3-223	ENST00000600995	TSPY10	P0CW01	314 aa		31.52	■■■□□ 2.64
GTPBP3-223	ENST00000600995	PTPRM	P28827	1452 aa		31.52	■■■□□ 2.64
GTPBP3-223	ENST00000600995	ADGB	Q8N7X0	1667 aa		31.51	■■■□□ 2.64
GTPBP3-223	ENST00000600995	MLEC	Q14165	292 aa		31.51	■■■□□ 2.63
GTPBP3-223	ENST00000600995	PTPN23	Q9H3S7	1636 aa		31.49	■■■□□ 2.63
GTPBP3-223	ENST00000600995	FGD6	Q6ZV73	1430 aa		31.49	■■■□□ 2.63
GTPBP3-223	ENST00000600995	FER1L4	A9Z1Z3	1794 aa		31.48	■■■□□ 2.63
GTPBP3-223	ENST00000600995	A2M	P01023	1474 aa		31.48	■■■□□ 2.63
GTPBP3-223	ENST00000600995	RIMS1	Q86UR5	1692 aa	Known RBP	31.48	■■■□□ 2.63
GTPBP3-223	ENST00000600995	PLXNC1	O60486	1568 aa		31.45	■■■□□ 2.63
GTPBP3-223	ENST00000600995	TCOF1	Q13428	1488 aa	Known RBP	31.44	■■■□□ 2.62
GTPBP3-223	ENST00000600995	MAST1	Q9Y2H9	1570 aa		31.43	■■■□□ 2.62
GTPBP3-223	ENST00000600995	DHX29	Q7Z478	1369 aa	Known RBP	31.4	■■■□□ 2.62
GTPBP3-223	ENST00000600995	ESF1	Q9H501	851 aa	Known RBP	31.34	■■■□□ 2.61
GTPBP3-223	ENST00000600995	DNMT1	P26358	1616 aa	Known RBP	31.33	■■■□□ 2.61
GTPBP3-223	ENST00000600995	SHANK2	Q9UPX8	1470 aa		31.33	■■■□□ 2.61
GTPBP3-223	ENST00000600995	ABCC5	O15440	1437 aa		31.32	■■■□□ 2.61
GTPBP3-223	ENST00000600995	CROCC2	H7BZ55	1655 aa		31.32	■■■□□ 2.6
GTPBP3-223	ENST00000600995	PPP6R1	Q9UPN7	881 aa		31.32	■■■□□ 2.6
GTPBP3-223	ENST00000600995	CNTLN	Q9NXG0	1405 aa		31.31	■■■□□ 2.6
GTPBP3-223	ENST00000600995	DAPK1	P53355	1430 aa		31.3	■■■□□ 2.6
GTPBP3-223	ENST00000600995	GGT6	Q6P531	493 aa		31.25	■■■□□ 2.59
GTPBP3-223	ENST00000600995	FAM50A	Q14320	339 aa	Known RBP	31.24	■■■□□ 2.59
GTPBP3-223	ENST00000600995	MROH2A	A6NES4	1674 aa		31.23	■■■□□ 2.59
GTPBP3-223	ENST00000600995	KIF3B	O15066	747 aa		31.23	■■■□□ 2.59
GTPBP3-223	ENST00000600995	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.22	■■■□□ 2.59
GTPBP3-223	ENST00000600995	SETD1B	Q9UPS6	1966 aa	Known RBP	31.22	■■■□□ 2.59
GTPBP3-223	ENST00000600995	DUOX2	Q9NRD8	1548 aa		31.2	■■■□□ 2.59
GTPBP3-223	ENST00000600995	C3	P01024	1663 aa		31.2	■■■□□ 2.59
GTPBP3-223	ENST00000600995	PLPPR3	Q6T4P5	718 aa		31.2	■■■□□ 2.59
GTPBP3-223	ENST00000600995	CEBPA	P49715	358 aa	Predicted RBP	31.19	■■■□□ 2.58
GTPBP3-223	ENST00000600995	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.19	■■■□□ 2.58
GTPBP3-223	ENST00000600995	FAM135A	Q9P2D6	1515 aa		31.17	■■■□□ 2.58
GTPBP3-223	ENST00000600995	ANKRD30A	Q9BXX3	1397 aa		31.17	■■■□□ 2.58
GTPBP3-223	ENST00000600995	CLTC	Q00610	1675 aa	Known RBP	31.16	■■■□□ 2.58
GTPBP3-223	ENST00000600995	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	31.16	■■■□□ 2.58
GTPBP3-223	ENST00000600995	KIF15	Q9NS87	1388 aa		31.16	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms