RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 CCNB3Q8WWL7 1395 aa12.04□□□□□ -0.48
FKRP-220ENST00000600646 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
FKRP-220ENST00000600646 SUPT6HQ7KZ85 1726 aaKnown RBP12.02□□□□□ -0.49
FKRP-220ENST00000600646 ADGRL1O94910 1474 aa12.02□□□□□ -0.49
FKRP-220ENST00000600646 CFDP1Q9UEE9 299 aaPredicted RBP12.01□□□□□ -0.49
FKRP-220ENST00000600646 PREX2Q70Z35 1606 aa12□□□□□ -0.49
FKRP-220ENST00000600646 ZNF777Q9ULD5 760 aaPredicted RBP12□□□□□ -0.49
FKRP-220ENST00000600646 LRRC9Q6ZRR7 1453 aa12□□□□□ -0.49
FKRP-220ENST00000600646 COL17A1Q9UMD9 1497 aaPredicted RBP12□□□□□ -0.49
FKRP-220ENST00000600646 ITSN2Q9NZM3 1697 aa12□□□□□ -0.49
FKRP-220ENST00000600646 RAPGEF3O95398 923 aa11.99□□□□□ -0.49
FKRP-220ENST00000600646 MYT1LQ9UL68 1186 aa11.99□□□□□ -0.49
FKRP-220ENST00000600646 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
FKRP-220ENST00000600646 CDC42BPAQ5VT25 1732 aa11.98□□□□□ -0.49
FKRP-220ENST00000600646 CDC42BPBQ9Y5S2 1711 aa11.98□□□□□ -0.49
FKRP-220ENST00000600646 GPATCH8Q9UKJ3 1502 aaKnown RBP11.97□□□□□ -0.49
FKRP-220ENST00000600646 PLEKHH2Q8IVE3 1493 aa11.97□□□□□ -0.49
FKRP-220ENST00000600646 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
FKRP-220ENST00000600646 ZNF518AQ6AHZ1 1483 aa11.96□□□□□ -0.49
FKRP-220ENST00000600646 MAGI2Q86UL8 1455 aa11.95□□□□□ -0.5
FKRP-220ENST00000600646 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
FKRP-220ENST00000600646 RICTORQ6R327 1708 aa11.94□□□□□ -0.5
FKRP-220ENST00000600646 KANK4Q5T7N3 995 aaPredicted RBP11.93□□□□□ -0.5
FKRP-220ENST00000600646 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
FKRP-220ENST00000600646 ABCC1P33527 1531 aa11.92□□□□□ -0.5
FKRP-220ENST00000600646 KIAA1107Q9UPP5 1409 aa11.92□□□□□ -0.5
FKRP-220ENST00000600646 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
FKRP-220ENST00000600646 ARID4BQ4LE39 1312 aaPredicted RBP11.91□□□□□ -0.5
FKRP-220ENST00000600646 AFAP1Q8N556 730 aa11.91□□□□□ -0.5
FKRP-220ENST00000600646 FRMPD1Q5SYB0 1578 aa11.91□□□□□ -0.5
FKRP-220ENST00000600646 HNRNPMP52272 730 aaKnown RBP eCLIP11.9□□□□□ -0.5
FKRP-220ENST00000600646 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
FKRP-220ENST00000600646 ZFYVE16Q7Z3T8 1539 aa11.9□□□□□ -0.5
FKRP-220ENST00000600646 MYOM3Q5VTT5 1437 aa11.89□□□□□ -0.51
FKRP-220ENST00000600646 MIA2Q96PC5 1412 aa11.89□□□□□ -0.51
FKRP-220ENST00000600646 SPAG9O60271 1321 aaKnown RBP11.88□□□□□ -0.51
FKRP-220ENST00000600646 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
FKRP-220ENST00000600646 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
FKRP-220ENST00000600646 TSPY4P0CV99 314 aa11.88□□□□□ -0.51
FKRP-220ENST00000600646 TSPY10P0CW01 314 aa11.88□□□□□ -0.51
FKRP-220ENST00000600646 KDM5CP41229 1560 aa11.88□□□□□ -0.51
FKRP-220ENST00000600646 ARHGEF40Q8TER5 1519 aa11.87□□□□□ -0.51
FKRP-220ENST00000600646 MLH3Q9UHC1 1453 aa11.87□□□□□ -0.51
FKRP-220ENST00000600646 TRAPPC8Q9Y2L5 1435 aa11.86□□□□□ -0.51
FKRP-220ENST00000600646 ATP10AO60312 1499 aa11.86□□□□□ -0.51
FKRP-220ENST00000600646 CAMSAP2Q08AD1 1489 aa11.86□□□□□ -0.51
FKRP-220ENST00000600646 ARHGEF12Q9NZN5 1544 aa11.85□□□□□ -0.51
FKRP-220ENST00000600646 C9orf84Q5VXU9 1444 aa11.85□□□□□ -0.51
FKRP-220ENST00000600646 ZNF644Q9H582 1327 aaPredicted RBP11.85□□□□□ -0.51
FKRP-220ENST00000600646 YEATS2Q9ULM3 1422 aa11.84□□□□□ -0.51
FKRP-220ENST00000600646 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
FKRP-220ENST00000600646 FOXD1Q16676 465 aa11.83□□□□□ -0.52
FKRP-220ENST00000600646 ESF1Q9H501 851 aaKnown RBP11.82□□□□□ -0.52
FKRP-220ENST00000600646 RTEL1-TNFRSF6BF6WH68 1400 aa11.82□□□□□ -0.52
FKRP-220ENST00000600646 ARHGEF5Q12774 1597 aa11.82□□□□□ -0.52
FKRP-220ENST00000600646 MBD5Q9P267 1494 aa11.82□□□□□ -0.52
FKRP-220ENST00000600646 ATP7AQ04656 1500 aa11.81□□□□□ -0.52
FKRP-220ENST00000600646 FGD6Q6ZV73 1430 aa11.81□□□□□ -0.52
FKRP-220ENST00000600646 PTPN23Q9H3S7 1636 aa11.81□□□□□ -0.52
FKRP-220ENST00000600646 KDM4FA0A1W2PPD8 638 aa11.8□□□□□ -0.52
FKRP-220ENST00000600646 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
FKRP-220ENST00000600646 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
FKRP-220ENST00000600646 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
FKRP-220ENST00000600646 KIDINS220Q9ULH0 1771 aa11.79□□□□□ -0.52
FKRP-220ENST00000600646 MLECQ14165 292 aa11.79□□□□□ -0.52
FKRP-220ENST00000600646 INO80Q9ULG1 1556 aaPredicted RBP11.79□□□□□ -0.52
FKRP-220ENST00000600646 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
FKRP-220ENST00000600646 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
FKRP-220ENST00000600646 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.52
FKRP-220ENST00000600646 PPARGC1BQ86YN6 1023 aaKnown RBP11.77□□□□□ -0.53
FKRP-220ENST00000600646 A2MP01023 1474 aa11.76□□□□□ -0.53
FKRP-220ENST00000600646 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
FKRP-220ENST00000600646 AGLP35573 1532 aa11.76□□□□□ -0.53
FKRP-220ENST00000600646 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
FKRP-220ENST00000600646 DHX29Q7Z478 1369 aaKnown RBP11.74□□□□□ -0.53
FKRP-220ENST00000600646 SHANK2Q9UPX8 1470 aa11.74□□□□□ -0.53
FKRP-220ENST00000600646 ADAMTSL3P82987 1691 aa11.74□□□□□ -0.53
FKRP-220ENST00000600646 DNMT1P26358 1616 aaKnown RBP11.73□□□□□ -0.53
FKRP-220ENST00000600646 DAPK1P53355 1430 aa11.73□□□□□ -0.53
FKRP-220ENST00000600646 PPP6R1Q9UPN7 881 aa11.73□□□□□ -0.53
FKRP-220ENST00000600646 MADDQ8WXG6 1647 aa11.72□□□□□ -0.53
FKRP-220ENST00000600646 ANKRD30AQ9BXX3 1397 aa11.72□□□□□ -0.53
FKRP-220ENST00000600646 FER1L4A9Z1Z3 1794 aa11.72□□□□□ -0.53
FKRP-220ENST00000600646 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.53
FKRP-220ENST00000600646 ABCC5O15440 1437 aa11.71□□□□□ -0.53
FKRP-220ENST00000600646 CNTLNQ9NXG0 1405 aa11.71□□□□□ -0.53
FKRP-220ENST00000600646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.71□□□□□ -0.53
FKRP-220ENST00000600646 GGT6Q6P531 493 aa11.71□□□□□ -0.53
FKRP-220ENST00000600646 PLXNC1O60486 1568 aa11.71□□□□□ -0.54
FKRP-220ENST00000600646 PTPRMP28827 1452 aa11.7□□□□□ -0.54
FKRP-220ENST00000600646 KIF3BO15066 747 aa11.7□□□□□ -0.54
FKRP-220ENST00000600646 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
FKRP-220ENST00000600646 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
FKRP-220ENST00000600646 DUOX2Q9NRD8 1548 aa11.7□□□□□ -0.54
FKRP-220ENST00000600646 RRP7BPQ9NSQ0 103 aa11.69□□□□□ -0.54
FKRP-220ENST00000600646 SIGLEC1Q9BZZ2 1709 aa11.69□□□□□ -0.54
FKRP-220ENST00000600646 KIF15Q9NS87 1388 aa11.68□□□□□ -0.54
FKRP-220ENST00000600646 PLPPR3Q6T4P5 718 aa11.68□□□□□ -0.54
FKRP-220ENST00000600646 ITGAEP38570 1179 aa11.67□□□□□ -0.54
FKRP-220ENST00000600646 EIF2AK4Q9P2K8 1649 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms