RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 EHBP1L1Q8N3D4 1523 aa44.55■■■■■ 4.72
SSBP4-206ENST00000599699 PREX2Q70Z35 1606 aa44.53■■■■■ 4.72
SSBP4-206ENST00000599699 CDC42BPBQ9Y5S2 1711 aa44.52■■■■■ 4.72
SSBP4-206ENST00000599699 RICTORQ6R327 1708 aa44.5■■■■■ 4.71
SSBP4-206ENST00000599699 CCNB3Q8WWL7 1395 aa44.5■■■■■ 4.71
SSBP4-206ENST00000599699 TIAM1Q13009 1591 aa44.5■■■■■ 4.71
SSBP4-206ENST00000599699 POGZQ7Z3K3 1410 aa44.47■■■■■ 4.71
SSBP4-206ENST00000599699 CDC42BPAQ5VT25 1732 aa44.47■■■■■ 4.71
SSBP4-206ENST00000599699 GPATCH8Q9UKJ3 1502 aaKnown RBP44.46■■■■■ 4.71
SSBP4-206ENST00000599699 ZNF777Q9ULD5 760 aaPredicted RBP44.45■■■■■ 4.71
SSBP4-206ENST00000599699 KDM4FA0A1W2PPD8 638 aa44.44■■■■■ 4.7
SSBP4-206ENST00000599699 CFDP1Q9UEE9 299 aaPredicted RBP44.41■■■■■ 4.7
SSBP4-206ENST00000599699 APLP2Q06481 763 aa44.38■■■■■ 4.7
SSBP4-206ENST00000599699 ZMYM4Q5VZL5 1548 aa44.37■■■■■ 4.69
SSBP4-206ENST00000599699 LRRC9Q6ZRR7 1453 aa44.34■■■■■ 4.69
SSBP4-206ENST00000599699 AFAP1Q8N556 730 aa44.34■■■■■ 4.69
SSBP4-206ENST00000599699 MAP3K1Q13233 1512 aa44.34■■■■■ 4.69
SSBP4-206ENST00000599699 ZNF518AQ6AHZ1 1483 aa44.34■■■■■ 4.69
SSBP4-206ENST00000599699 ABCC1P33527 1531 aa44.32■■■■■ 4.69
SSBP4-206ENST00000599699 ARHGEF40Q8TER5 1519 aa44.31■■■■■ 4.68
SSBP4-206ENST00000599699 SUPT6HQ7KZ85 1726 aaKnown RBP44.31■■■■■ 4.68
SSBP4-206ENST00000599699 MAGI2Q86UL8 1455 aa44.31■■■■■ 4.68
SSBP4-206ENST00000599699 ZFYVE16Q7Z3T8 1539 aa44.3■■■■■ 4.68
SSBP4-206ENST00000599699 NCOA2Q15596 1464 aa44.3■■■■■ 4.68
SSBP4-206ENST00000599699 MYT1LQ9UL68 1186 aa44.3■■■■■ 4.68
SSBP4-206ENST00000599699 KANK4Q5T7N3 995 aaPredicted RBP44.29■■■■■ 4.68
SSBP4-206ENST00000599699 ARID4BQ4LE39 1312 aaPredicted RBP44.27■■■■■ 4.68
SSBP4-206ENST00000599699 YEATS2Q9ULM3 1422 aa44.27■■■■■ 4.68
SSBP4-206ENST00000599699 ARHGEF12Q9NZN5 1544 aa44.26■■■■■ 4.68
SSBP4-206ENST00000599699 SAMD9LQ8IVG5 1584 aa44.25■■■■■ 4.67
SSBP4-206ENST00000599699 TRAPPC8Q9Y2L5 1435 aa44.24■■■■■ 4.67
SSBP4-206ENST00000599699 ITSN2Q9NZM3 1697 aa44.22■■■■■ 4.67
SSBP4-206ENST00000599699 HNRNPMP52272 730 aaKnown RBP eCLIP44.2■■■■■ 4.67
SSBP4-206ENST00000599699 KDM5CP41229 1560 aa44.19■■■■■ 4.66
SSBP4-206ENST00000599699 PLEKHH2Q8IVE3 1493 aa44.19■■■■■ 4.66
SSBP4-206ENST00000599699 SYCP2Q9BX26 1530 aa44.18■■■■■ 4.66
SSBP4-206ENST00000599699 ZNF644Q9H582 1327 aaPredicted RBP44.15■■■■■ 4.66
SSBP4-206ENST00000599699 KIAA1107Q9UPP5 1409 aa44.14■■■■■ 4.66
SSBP4-206ENST00000599699 HECW2Q9P2P5 1572 aa44.12■■■■■ 4.65
SSBP4-206ENST00000599699 ATP10AO60312 1499 aa44.1■■■■■ 4.65
SSBP4-206ENST00000599699 MLH3Q9UHC1 1453 aa44.08■■■■■ 4.65
SSBP4-206ENST00000599699 C9orf84Q5VXU9 1444 aa44.04■■■■■ 4.64
SSBP4-206ENST00000599699 SPAG9O60271 1321 aaKnown RBP44.03■■■■■ 4.64
SSBP4-206ENST00000599699 CAMSAP2Q08AD1 1489 aa43.97■■■■■ 4.63
SSBP4-206ENST00000599699 BCORL1Q5H9F3 1711 aa43.97■■■■■ 4.63
SSBP4-206ENST00000599699 DIP2CQ9Y2E4 1556 aa43.97■■■■■ 4.63
SSBP4-206ENST00000599699 MLECQ14165 292 aa43.96■■■■■ 4.63
SSBP4-206ENST00000599699 MYOM3Q5VTT5 1437 aa43.94■■■■■ 4.62
SSBP4-206ENST00000599699 ABCA6Q8N139 1617 aa43.94■■■■■ 4.62
SSBP4-206ENST00000599699 SIGLEC1Q9BZZ2 1709 aa43.93■■■■■ 4.62
SSBP4-206ENST00000599699 MBD5Q9P267 1494 aa43.93■■■■■ 4.62
SSBP4-206ENST00000599699 KIDINS220Q9ULH0 1771 aa43.92■■■■■ 4.62
SSBP4-206ENST00000599699 ADAMTSL3P82987 1691 aa43.91■■■■■ 4.62
SSBP4-206ENST00000599699 ATP7AQ04656 1500 aa43.86■■■■■ 4.61
SSBP4-206ENST00000599699 MIA2Q96PC5 1412 aa43.86■■■■■ 4.61
SSBP4-206ENST00000599699 RSPH4AQ5TD94 716 aa43.84■■■■■ 4.61
SSBP4-206ENST00000599699 MADDQ8WXG6 1647 aa43.83■■■■■ 4.61
SSBP4-206ENST00000599699 CCDC141Q6ZP82 1450 aa43.83■■■■■ 4.61
SSBP4-206ENST00000599699 REREQ9P2R6 1566 aa43.81■■■■■ 4.6
SSBP4-206ENST00000599699 INO80Q9ULG1 1556 aaPredicted RBP43.81■■■■■ 4.6
SSBP4-206ENST00000599699 PTPRMP28827 1452 aa43.76■■■■■ 4.6
SSBP4-206ENST00000599699 TSPY4P0CV99 314 aa43.74■■■■■ 4.59
SSBP4-206ENST00000599699 TSPY10P0CW01 314 aa43.74■■■■■ 4.59
SSBP4-206ENST00000599699 ARHGEF5Q12774 1597 aa43.73■■■■■ 4.59
SSBP4-206ENST00000599699 RTEL1-TNFRSF6BF6WH68 1400 aa43.73■■■■■ 4.59
SSBP4-206ENST00000599699 AGLP35573 1532 aa43.71■■■■■ 4.59
SSBP4-206ENST00000599699 RIMS1Q86UR5 1692 aaKnown RBP43.71■■■■■ 4.59
SSBP4-206ENST00000599699 A2MP01023 1474 aa43.68■■■■■ 4.58
SSBP4-206ENST00000599699 FGD6Q6ZV73 1430 aa43.67■■■■■ 4.58
SSBP4-206ENST00000599699 PLPPR3Q6T4P5 718 aa43.66■■■■■ 4.58
SSBP4-206ENST00000599699 PTPN23Q9H3S7 1636 aa43.64■■■■■ 4.58
SSBP4-206ENST00000599699 FER1L4A9Z1Z3 1794 aa43.63■■■■■ 4.57
SSBP4-206ENST00000599699 PPARGC1BQ86YN6 1023 aaKnown RBP43.6■■■■■ 4.57
SSBP4-206ENST00000599699 ESF1Q9H501 851 aaKnown RBP43.6■■■■■ 4.57
SSBP4-206ENST00000599699 ADGBQ8N7X0 1667 aa43.59■■■■■ 4.57
SSBP4-206ENST00000599699 PLXNC1O60486 1568 aa43.56■■■■■ 4.56
SSBP4-206ENST00000599699 TCOF1Q13428 1488 aaKnown RBP43.53■■■■■ 4.56
SSBP4-206ENST00000599699 DHX29Q7Z478 1369 aaKnown RBP43.53■■■■■ 4.56
SSBP4-206ENST00000599699 FAM50AQ14320 339 aaKnown RBP43.49■■■■■ 4.55
SSBP4-206ENST00000599699 GGT6Q6P531 493 aa43.48■■■■■ 4.55
SSBP4-206ENST00000599699 MAST1Q9Y2H9 1570 aa43.48■■■■■ 4.55
SSBP4-206ENST00000599699 ABCC5O15440 1437 aa43.46■■■■■ 4.55
SSBP4-206ENST00000599699 CEBPAP49715 358 aaPredicted RBP43.43■■■■■ 4.54
SSBP4-206ENST00000599699 DAPK1P53355 1430 aa43.42■■■■■ 4.54
SSBP4-206ENST00000599699 KIF3BO15066 747 aa43.41■■■■■ 4.54
SSBP4-206ENST00000599699 CNTLNQ9NXG0 1405 aa43.39■■■■■ 4.54
SSBP4-206ENST00000599699 DNMT1P26358 1616 aaKnown RBP43.38■■■■■ 4.54
SSBP4-206ENST00000599699 SHANK2Q9UPX8 1470 aa43.38■■■■■ 4.53
SSBP4-206ENST00000599699 CROCC2H7BZ55 1655 aa43.34■■■■■ 4.53
SSBP4-206ENST00000599699 CHIC2Q9UKJ5 165 aa43.33■■■■■ 4.53
SSBP4-206ENST00000599699 RRP7BPQ9NSQ0 103 aa43.3■■■■■ 4.52
SSBP4-206ENST00000599699 PPP6R1Q9UPN7 881 aa43.3■■■■■ 4.52
SSBP4-206ENST00000599699 KIF15Q9NS87 1388 aa43.28■■■■■ 4.52
SSBP4-206ENST00000599699 DUOX2Q9NRD8 1548 aa43.24■■■■■ 4.51
SSBP4-206ENST00000599699 C3P01024 1663 aa43.24■■■■■ 4.51
SSBP4-206ENST00000599699 ZMYM3Q14202 1370 aa43.23■■■■■ 4.51
SSBP4-206ENST00000599699 ANKRD30AQ9BXX3 1397 aa43.23■■■■■ 4.51
SSBP4-206ENST00000599699 CLTCQ00610 1675 aaKnown RBP43.22■■■■■ 4.51
SSBP4-206ENST00000599699 LMTK3Q96Q04 1460 aa43.19■■■■■ 4.5
SSBP4-206ENST00000599699 MROH2AA6NES4 1674 aa43.18■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms