RNA–Protein interactions for RNA: ENST00000599476.1

GRAMD1A-210, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-210ENST00000599476 ARAP3Q8WWN8 1544 aa12.51□□□□□ -0.41
GRAMD1A-210ENST00000599476 MTUS2Q5JR59 1369 aa12.49□□□□□ -0.41
GRAMD1A-210ENST00000599476 FANCAO15360 1455 aa12.48□□□□□ -0.41
GRAMD1A-210ENST00000599476 AKNAQ7Z591 1439 aa12.48□□□□□ -0.41
GRAMD1A-210ENST00000599476 LRRIQ1Q96JM4 1722 aa12.48□□□□□ -0.41
GRAMD1A-210ENST00000599476 KIF14Q15058 1648 aa12.47□□□□□ -0.41
GRAMD1A-210ENST00000599476 MAP3K1Q13233 1512 aa12.47□□□□□ -0.41
GRAMD1A-210ENST00000599476 RAPGEF3O95398 923 aa12.46□□□□□ -0.41
GRAMD1A-210ENST00000599476 TIAM1Q13009 1591 aa12.46□□□□□ -0.42
GRAMD1A-210ENST00000599476 TTC37Q6PGP7 1564 aa12.45□□□□□ -0.42
GRAMD1A-210ENST00000599476 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
GRAMD1A-210ENST00000599476 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
GRAMD1A-210ENST00000599476 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
GRAMD1A-210ENST00000599476 CFDP1Q9UEE9 299 aaPredicted RBP12.42□□□□□ -0.42
GRAMD1A-210ENST00000599476 SCAPERQ9BY12 1400 aa12.42□□□□□ -0.42
GRAMD1A-210ENST00000599476 CCNB3Q8WWL7 1395 aa12.42□□□□□ -0.42
GRAMD1A-210ENST00000599476 KANK4Q5T7N3 995 aaPredicted RBP12.41□□□□□ -0.42
GRAMD1A-210ENST00000599476 ARHGAP5Q13017 1502 aa12.41□□□□□ -0.42
GRAMD1A-210ENST00000599476 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
GRAMD1A-210ENST00000599476 LRRC9Q6ZRR7 1453 aa12.4□□□□□ -0.42
GRAMD1A-210ENST00000599476 EHBP1L1Q8N3D4 1523 aa12.4□□□□□ -0.42
GRAMD1A-210ENST00000599476 MYO5CQ9NQX4 1742 aa12.4□□□□□ -0.43
GRAMD1A-210ENST00000599476 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
GRAMD1A-210ENST00000599476 AFAP1Q8N556 730 aa12.37□□□□□ -0.43
GRAMD1A-210ENST00000599476 MAGI2Q86UL8 1455 aa12.37□□□□□ -0.43
GRAMD1A-210ENST00000599476 POGZQ7Z3K3 1410 aa12.36□□□□□ -0.43
GRAMD1A-210ENST00000599476 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
GRAMD1A-210ENST00000599476 PREX2Q70Z35 1606 aa12.35□□□□□ -0.43
GRAMD1A-210ENST00000599476 NCOA2Q15596 1464 aa12.34□□□□□ -0.43
GRAMD1A-210ENST00000599476 ZNF518AQ6AHZ1 1483 aa12.34□□□□□ -0.43
GRAMD1A-210ENST00000599476 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
GRAMD1A-210ENST00000599476 CDC42BPBQ9Y5S2 1711 aa12.34□□□□□ -0.43
GRAMD1A-210ENST00000599476 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.43
GRAMD1A-210ENST00000599476 RSPH4AQ5TD94 716 aa12.34□□□□□ -0.43
GRAMD1A-210ENST00000599476 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
GRAMD1A-210ENST00000599476 SUPT6HQ7KZ85 1726 aaKnown RBP12.33□□□□□ -0.44
GRAMD1A-210ENST00000599476 CDC42BPAQ5VT25 1732 aa12.32□□□□□ -0.44
GRAMD1A-210ENST00000599476 RICTORQ6R327 1708 aa12.32□□□□□ -0.44
GRAMD1A-210ENST00000599476 FRMPD1Q5SYB0 1578 aa12.32□□□□□ -0.44
GRAMD1A-210ENST00000599476 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
GRAMD1A-210ENST00000599476 TRAPPC8Q9Y2L5 1435 aa12.31□□□□□ -0.44
GRAMD1A-210ENST00000599476 ARID4BQ4LE39 1312 aaPredicted RBP12.31□□□□□ -0.44
GRAMD1A-210ENST00000599476 ZNF644Q9H582 1327 aaPredicted RBP12.31□□□□□ -0.44
GRAMD1A-210ENST00000599476 ARHGEF12Q9NZN5 1544 aa12.31□□□□□ -0.44
GRAMD1A-210ENST00000599476 ITSN2Q9NZM3 1697 aa12.3□□□□□ -0.44
GRAMD1A-210ENST00000599476 MLH3Q9UHC1 1453 aa12.3□□□□□ -0.44
GRAMD1A-210ENST00000599476 ABCC1P33527 1531 aa12.3□□□□□ -0.44
GRAMD1A-210ENST00000599476 SPAG9O60271 1321 aaKnown RBP12.3□□□□□ -0.44
GRAMD1A-210ENST00000599476 HSPA2P54652 639 aa12.29□□□□□ -0.44
GRAMD1A-210ENST00000599476 MIA2Q96PC5 1412 aa12.28□□□□□ -0.44
GRAMD1A-210ENST00000599476 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
GRAMD1A-210ENST00000599476 ATP10AO60312 1499 aa12.28□□□□□ -0.44
GRAMD1A-210ENST00000599476 ZFYVE16Q7Z3T8 1539 aa12.28□□□□□ -0.44
GRAMD1A-210ENST00000599476 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
GRAMD1A-210ENST00000599476 PTPRMP28827 1452 aa12.27□□□□□ -0.44
GRAMD1A-210ENST00000599476 KDM5CP41229 1560 aa12.27□□□□□ -0.44
GRAMD1A-210ENST00000599476 SAMD9LQ8IVG5 1584 aa12.27□□□□□ -0.44
GRAMD1A-210ENST00000599476 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.45
GRAMD1A-210ENST00000599476 TSPY4P0CV99 314 aa12.26□□□□□ -0.45
GRAMD1A-210ENST00000599476 TSPY10P0CW01 314 aa12.26□□□□□ -0.45
GRAMD1A-210ENST00000599476 MBD5Q9P267 1494 aa12.26□□□□□ -0.45
GRAMD1A-210ENST00000599476 C9orf84Q5VXU9 1444 aa12.25□□□□□ -0.45
GRAMD1A-210ENST00000599476 RRBP1Q9P2E9 1410 aaKnown RBP12.25□□□□□ -0.45
GRAMD1A-210ENST00000599476 ARHGEF40Q8TER5 1519 aa12.25□□□□□ -0.45
GRAMD1A-210ENST00000599476 SYCP2Q9BX26 1530 aa12.25□□□□□ -0.45
GRAMD1A-210ENST00000599476 RTEL1-TNFRSF6BF6WH68 1400 aa12.24□□□□□ -0.45
GRAMD1A-210ENST00000599476 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
GRAMD1A-210ENST00000599476 CAMSAP2Q08AD1 1489 aa12.22□□□□□ -0.45
GRAMD1A-210ENST00000599476 ITGAEP38570 1179 aa12.22□□□□□ -0.45
GRAMD1A-210ENST00000599476 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.46
GRAMD1A-210ENST00000599476 MLECQ14165 292 aa12.2□□□□□ -0.46
GRAMD1A-210ENST00000599476 ARHGEF5Q12774 1597 aa12.18□□□□□ -0.46
GRAMD1A-210ENST00000599476 REREQ9P2R6 1566 aa12.18□□□□□ -0.46
GRAMD1A-210ENST00000599476 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
GRAMD1A-210ENST00000599476 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
GRAMD1A-210ENST00000599476 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
GRAMD1A-210ENST00000599476 AGLP35573 1532 aa12.17□□□□□ -0.46
GRAMD1A-210ENST00000599476 ATP7AQ04656 1500 aa12.17□□□□□ -0.46
GRAMD1A-210ENST00000599476 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
GRAMD1A-210ENST00000599476 PPP6R1Q9UPN7 881 aa12.17□□□□□ -0.46
GRAMD1A-210ENST00000599476 DHX29Q7Z478 1369 aaKnown RBP12.17□□□□□ -0.46
GRAMD1A-210ENST00000599476 A2MP01023 1474 aa12.16□□□□□ -0.46
GRAMD1A-210ENST00000599476 ESF1Q9H501 851 aaKnown RBP12.16□□□□□ -0.46
GRAMD1A-210ENST00000599476 BCORL1Q5H9F3 1711 aa12.16□□□□□ -0.46
GRAMD1A-210ENST00000599476 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
GRAMD1A-210ENST00000599476 PTPN23Q9H3S7 1636 aa12.15□□□□□ -0.46
GRAMD1A-210ENST00000599476 TCOF1Q13428 1488 aaKnown RBP12.15□□□□□ -0.46
GRAMD1A-210ENST00000599476 ABCA6Q8N139 1617 aa12.15□□□□□ -0.47
GRAMD1A-210ENST00000599476 INO80Q9ULG1 1556 aaPredicted RBP12.14□□□□□ -0.47
GRAMD1A-210ENST00000599476 ABCC5O15440 1437 aa12.14□□□□□ -0.47
GRAMD1A-210ENST00000599476 KIF3BO15066 747 aa12.12□□□□□ -0.47
GRAMD1A-210ENST00000599476 GGT6Q6P531 493 aa12.12□□□□□ -0.47
GRAMD1A-210ENST00000599476 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
GRAMD1A-210ENST00000599476 DAPK1P53355 1430 aa12.11□□□□□ -0.47
GRAMD1A-210ENST00000599476 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
GRAMD1A-210ENST00000599476 CCER1Q8TC90 406 aaPredicted RBP12.1□□□□□ -0.47
GRAMD1A-210ENST00000599476 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
GRAMD1A-210ENST00000599476 SRCAPQ6ZRS2 3230 aa12.1□□□□□ -0.47
GRAMD1A-210ENST00000599476 CNTLNQ9NXG0 1405 aa12.1□□□□□ -0.47
GRAMD1A-210ENST00000599476 ADGBQ8N7X0 1667 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms