RNA–Protein interactions for RNA: ENST00000599362.5

SNRPA-206, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-206ENST00000599362 MAGI2Q86UL8 1455 aa30.2■■■□□ 2.43
SNRPA-206ENST00000599362 POGZQ7Z3K3 1410 aa30.2■■■□□ 2.42
SNRPA-206ENST00000599362 BCORL1Q5H9F3 1711 aa30.16■■■□□ 2.42
SNRPA-206ENST00000599362 ZFYVE16Q7Z3T8 1539 aa30.16■■■□□ 2.42
SNRPA-206ENST00000599362 YEATS2Q9ULM3 1422 aa30.15■■■□□ 2.42
SNRPA-206ENST00000599362 ARHGAP5Q13017 1502 aa30.13■■■□□ 2.41
SNRPA-206ENST00000599362 ARID4BQ4LE39 1312 aaPredicted RBP30.12■■■□□ 2.41
SNRPA-206ENST00000599362 HECW2Q9P2P5 1572 aa30.11■■■□□ 2.41
SNRPA-206ENST00000599362 PTPRMP28827 1452 aa30.1■■■□□ 2.41
SNRPA-206ENST00000599362 CDC42BPBQ9Y5S2 1711 aa30.08■■■□□ 2.41
SNRPA-206ENST00000599362 PREX2Q70Z35 1606 aa30.07■■■□□ 2.4
SNRPA-206ENST00000599362 ZNF518AQ6AHZ1 1483 aa30.06■■■□□ 2.4
SNRPA-206ENST00000599362 MADDQ8WXG6 1647 aa30.05■■■□□ 2.4
SNRPA-206ENST00000599362 SIGLEC1Q9BZZ2 1709 aa30.04■■■□□ 2.4
SNRPA-206ENST00000599362 KDM5CP41229 1560 aa30.03■■■□□ 2.4
SNRPA-206ENST00000599362 CEP162Q5TB80 1403 aa30.01■■■□□ 2.39
SNRPA-206ENST00000599362 ATP10AO60312 1499 aa30■■■□□ 2.39
SNRPA-206ENST00000599362 AFAP1Q8N556 730 aa30■■■□□ 2.39
SNRPA-206ENST00000599362 CDC42BPAQ5VT25 1732 aa29.99■■■□□ 2.39
SNRPA-206ENST00000599362 ABCC1P33527 1531 aa29.98■■■□□ 2.39
SNRPA-206ENST00000599362 C9orf84Q5VXU9 1444 aa29.97■■■□□ 2.39
SNRPA-206ENST00000599362 ARHGEF12Q9NZN5 1544 aa29.96■■■□□ 2.39
SNRPA-206ENST00000599362 GPATCH8Q9UKJ3 1502 aaKnown RBP29.93■■■□□ 2.38
SNRPA-206ENST00000599362 RIMS1Q86UR5 1692 aaKnown RBP29.93■■■□□ 2.38
SNRPA-206ENST00000599362 TRAPPC8Q9Y2L5 1435 aa29.93■■■□□ 2.38
SNRPA-206ENST00000599362 MLH3Q9UHC1 1453 aa29.93■■■□□ 2.38
SNRPA-206ENST00000599362 ITSN2Q9NZM3 1697 aa29.91■■■□□ 2.38
SNRPA-206ENST00000599362 MTUS2Q5JR59 1369 aa29.89■■■□□ 2.37
SNRPA-206ENST00000599362 DIP2CQ9Y2E4 1556 aa29.88■■■□□ 2.37
SNRPA-206ENST00000599362 REREQ9P2R6 1566 aa29.86■■■□□ 2.37
SNRPA-206ENST00000599362 MLECQ14165 292 aa29.86■■■□□ 2.37
SNRPA-206ENST00000599362 SAMD9LQ8IVG5 1584 aa29.86■■■□□ 2.37
SNRPA-206ENST00000599362 ABCA6Q8N139 1617 aa29.83■■■□□ 2.37
SNRPA-206ENST00000599362 CCNB3Q8WWL7 1395 aa29.82■■■□□ 2.36
SNRPA-206ENST00000599362 MYT1LQ9UL68 1186 aa29.82■■■□□ 2.36
SNRPA-206ENST00000599362 FER1L4A9Z1Z3 1794 aa29.82■■■□□ 2.36
SNRPA-206ENST00000599362 EHBP1L1Q8N3D4 1523 aa29.81■■■□□ 2.36
SNRPA-206ENST00000599362 LOC105371045A0A1W2PR82 267 aa29.81■■■□□ 2.36
SNRPA-206ENST00000599362 ZNF777Q9ULD5 760 aaPredicted RBP29.81■■■□□ 2.36
SNRPA-206ENST00000599362 KIAA1107Q9UPP5 1409 aa29.79■■■□□ 2.36
SNRPA-206ENST00000599362 CFDP1Q9UEE9 299 aaPredicted RBP29.79■■■□□ 2.36
SNRPA-206ENST00000599362 SYCP2Q9BX26 1530 aa29.79■■■□□ 2.36
SNRPA-206ENST00000599362 KIDINS220Q9ULH0 1771 aa29.79■■■□□ 2.36
SNRPA-206ENST00000599362 LMTK3Q96Q04 1460 aa29.79■■■□□ 2.36
SNRPA-206ENST00000599362 PLEKHH2Q8IVE3 1493 aa29.78■■■□□ 2.36
SNRPA-206ENST00000599362 AGLP35573 1532 aa29.76■■■□□ 2.36
SNRPA-206ENST00000599362 TIAM1Q13009 1591 aa29.75■■■□□ 2.35
SNRPA-206ENST00000599362 HNRNPMP52272 730 aaKnown RBP eCLIP29.74■■■□□ 2.35
SNRPA-206ENST00000599362 VPS8Q8N3P4 1428 aa29.7■■■□□ 2.34
SNRPA-206ENST00000599362 SPAG9O60271 1321 aaKnown RBP29.7■■■□□ 2.34
SNRPA-206ENST00000599362 PLPPR3Q6T4P5 718 aa29.68■■■□□ 2.34
SNRPA-206ENST00000599362 ATP7AQ04656 1500 aa29.65■■■□□ 2.34
SNRPA-206ENST00000599362 NCOA2Q15596 1464 aa29.64■■■□□ 2.34
SNRPA-206ENST00000599362 ZNF644Q9H582 1327 aaPredicted RBP29.64■■■□□ 2.34
SNRPA-206ENST00000599362 INO80Q9ULG1 1556 aaPredicted RBP29.64■■■□□ 2.33
SNRPA-206ENST00000599362 MBD5Q9P267 1494 aa29.63■■■□□ 2.33
SNRPA-206ENST00000599362 SUPT6HQ7KZ85 1726 aaKnown RBP29.62■■■□□ 2.33
SNRPA-206ENST00000599362 CEBPAP49715 358 aaPredicted RBP29.61■■■□□ 2.33
SNRPA-206ENST00000599362 HSPA2P54652 639 aa29.58■■■□□ 2.33
SNRPA-206ENST00000599362 PLXNC1O60486 1568 aa29.56■■■□□ 2.32
SNRPA-206ENST00000599362 LRRC9Q6ZRR7 1453 aa29.56■■■□□ 2.32
SNRPA-206ENST00000599362 MAP3K1Q13233 1512 aa29.55■■■□□ 2.32
SNRPA-206ENST00000599362 A2MP01023 1474 aa29.55■■■□□ 2.32
SNRPA-206ENST00000599362 ILDR1Q86SU0 546 aaPredicted RBP29.55■■■□□ 2.32
SNRPA-206ENST00000599362 CNTLNQ9NXG0 1405 aa29.54■■■□□ 2.32
SNRPA-206ENST00000599362 PREX1Q8TCU6 1659 aa29.54■■■□□ 2.32
SNRPA-206ENST00000599362 C3P01024 1663 aa29.53■■■□□ 2.32
SNRPA-206ENST00000599362 RTEL1-TNFRSF6BF6WH68 1400 aa29.53■■■□□ 2.32
SNRPA-206ENST00000599362 SETD1BQ9UPS6 1966 aaKnown RBP29.52■■■□□ 2.32
SNRPA-206ENST00000599362 ESF1Q9H501 851 aaKnown RBP29.52■■■□□ 2.32
SNRPA-206ENST00000599362 CAMSAP2Q08AD1 1489 aa29.5■■■□□ 2.31
SNRPA-206ENST00000599362 ADGBQ8N7X0 1667 aa29.48■■■□□ 2.31
SNRPA-206ENST00000599362 RSPH4AQ5TD94 716 aa29.48■■■□□ 2.31
SNRPA-206ENST00000599362 CCDC141Q6ZP82 1450 aa29.47■■■□□ 2.31
SNRPA-206ENST00000599362 UHRF1BP1Q6BDS2 1440 aa29.46■■■□□ 2.31
SNRPA-206ENST00000599362 MROH2AA6NES4 1674 aa29.45■■■□□ 2.31
SNRPA-206ENST00000599362 KANK4Q5T7N3 995 aaPredicted RBP29.45■■■□□ 2.31
SNRPA-206ENST00000599362 ARHGEF5Q12774 1597 aa29.42■■■□□ 2.3
SNRPA-206ENST00000599362 ZMYM3Q14202 1370 aa29.4■■■□□ 2.3
SNRPA-206ENST00000599362 DHX29Q7Z478 1369 aaKnown RBP29.4■■■□□ 2.3
SNRPA-206ENST00000599362 PPP6R1Q9UPN7 881 aa29.39■■■□□ 2.3
SNRPA-206ENST00000599362 NPATQ14207 1427 aa29.38■■■□□ 2.29
SNRPA-206ENST00000599362 GGT6Q6P531 493 aa29.37■■■□□ 2.29
SNRPA-206ENST00000599362 MIA2Q96PC5 1412 aa29.35■■■□□ 2.29
SNRPA-206ENST00000599362 CLTCQ00610 1675 aaKnown RBP29.34■■■□□ 2.29
SNRPA-206ENST00000599362 MYOM3Q5VTT5 1437 aa29.34■■■□□ 2.29
SNRPA-206ENST00000599362 TSPY4P0CV99 314 aa29.31■■■□□ 2.28
SNRPA-206ENST00000599362 TSPY10P0CW01 314 aa29.31■■■□□ 2.28
SNRPA-206ENST00000599362 STRCQ7RTU9 1775 aa29.31■■■□□ 2.28
SNRPA-206ENST00000599362 FBXO41Q8TF61 875 aa29.29■■■□□ 2.28
SNRPA-206ENST00000599362 MAST1Q9Y2H9 1570 aa29.27■■■□□ 2.28
SNRPA-206ENST00000599362 PTPRKQ15262 1439 aa29.27■■■□□ 2.28
SNRPA-206ENST00000599362 KIF3BO15066 747 aa29.26■■■□□ 2.27
SNRPA-206ENST00000599362 APLP2Q06481 763 aa29.26■■■□□ 2.27
SNRPA-206ENST00000599362 DMRT2Q9Y5R5 561 aa29.25■■■□□ 2.27
SNRPA-206ENST00000599362 FAM135AQ9P2D6 1515 aa29.24■■■□□ 2.27
SNRPA-206ENST00000599362 PTPRTO14522 1441 aa29.2■■■□□ 2.26
SNRPA-206ENST00000599362 NCOA1Q15788 1441 aa29.2■■■□□ 2.26
SNRPA-206ENST00000599362 KDM5DQ9BY66 1539 aa29.18■■■□□ 2.26
SNRPA-206ENST00000599362 MYO3AQ8NEV4 1616 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms