RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 MADDQ8WXG6 1647 aa28.56■■■□□ 2.16
HOMER3-210ENST00000599097 TROQ12816 1431 aaPredicted RBP28.55■■■□□ 2.16
HOMER3-210ENST00000599097 SCAPERQ9BY12 1400 aa28.54■■■□□ 2.16
HOMER3-210ENST00000599097 CCDC18Q5T9S5 1454 aa28.52■■■□□ 2.16
HOMER3-210ENST00000599097 ZNF518AQ6AHZ1 1483 aa28.47■■■□□ 2.15
HOMER3-210ENST00000599097 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
HOMER3-210ENST00000599097 CASKIN1Q8WXD9 1431 aa28.46■■■□□ 2.15
HOMER3-210ENST00000599097 YEATS2Q9ULM3 1422 aa28.46■■■□□ 2.15
HOMER3-210ENST00000599097 RIMS1Q86UR5 1692 aaKnown RBP28.45■■■□□ 2.15
HOMER3-210ENST00000599097 ILDR1Q86SU0 546 aaPredicted RBP28.45■■■□□ 2.14
HOMER3-210ENST00000599097 PCF11O94913 1555 aaKnown RBP28.45■■■□□ 2.14
HOMER3-210ENST00000599097 ATP10AO60312 1499 aa28.42■■■□□ 2.14
HOMER3-210ENST00000599097 C9orf84Q5VXU9 1444 aa28.42■■■□□ 2.14
HOMER3-210ENST00000599097 FYCO1Q9BQS8 1478 aa28.4■■■□□ 2.14
HOMER3-210ENST00000599097 LRRIQ1Q96JM4 1722 aa28.36■■■□□ 2.13
HOMER3-210ENST00000599097 KDM5CP41229 1560 aa28.36■■■□□ 2.13
HOMER3-210ENST00000599097 LMTK3Q96Q04 1460 aa28.35■■■□□ 2.13
HOMER3-210ENST00000599097 FER1L4A9Z1Z3 1794 aa28.35■■■□□ 2.13
HOMER3-210ENST00000599097 PREX2Q70Z35 1606 aa28.33■■■□□ 2.13
HOMER3-210ENST00000599097 MYT1LQ9UL68 1186 aa28.31■■■□□ 2.12
HOMER3-210ENST00000599097 MLECQ14165 292 aa28.3■■■□□ 2.12
HOMER3-210ENST00000599097 ARHGEF12Q9NZN5 1544 aa28.29■■■□□ 2.12
HOMER3-210ENST00000599097 SIGLEC1Q9BZZ2 1709 aa28.29■■■□□ 2.12
HOMER3-210ENST00000599097 CDC42BPBQ9Y5S2 1711 aa28.28■■■□□ 2.12
HOMER3-210ENST00000599097 REREQ9P2R6 1566 aa28.27■■■□□ 2.12
HOMER3-210ENST00000599097 ABCC1P33527 1531 aa28.26■■■□□ 2.11
HOMER3-210ENST00000599097 MLH3Q9UHC1 1453 aa28.26■■■□□ 2.11
HOMER3-210ENST00000599097 AFAP1Q8N556 730 aa28.25■■■□□ 2.11
HOMER3-210ENST00000599097 DIP2CQ9Y2E4 1556 aa28.22■■■□□ 2.11
HOMER3-210ENST00000599097 PLPPR3Q6T4P5 718 aa28.21■■■□□ 2.11
HOMER3-210ENST00000599097 ITSN2Q9NZM3 1697 aa28.2■■■□□ 2.11
HOMER3-210ENST00000599097 FBXO41Q8TF61 875 aa28.18■■■□□ 2.1
HOMER3-210ENST00000599097 CDC42BPAQ5VT25 1732 aa28.18■■■□□ 2.1
HOMER3-210ENST00000599097 ESF1Q9H501 851 aaKnown RBP28.16■■■□□ 2.1
HOMER3-210ENST00000599097 AGLP35573 1532 aa28.16■■■□□ 2.1
HOMER3-210ENST00000599097 ABCA6Q8N139 1617 aa28.15■■■□□ 2.1
HOMER3-210ENST00000599097 PREX1Q8TCU6 1659 aa28.15■■■□□ 2.1
HOMER3-210ENST00000599097 PLEKHH2Q8IVE3 1493 aa28.15■■■□□ 2.1
HOMER3-210ENST00000599097 TRAPPC8Q9Y2L5 1435 aa28.14■■■□□ 2.1
HOMER3-210ENST00000599097 HSPA2P54652 639 aa28.11■■■□□ 2.09
HOMER3-210ENST00000599097 MTUS2Q5JR59 1369 aa28.11■■■□□ 2.09
HOMER3-210ENST00000599097 CCNB3Q8WWL7 1395 aa28.09■■■□□ 2.09
HOMER3-210ENST00000599097 GPATCH8Q9UKJ3 1502 aaKnown RBP28.08■■■□□ 2.09
HOMER3-210ENST00000599097 ZNF777Q9ULD5 760 aaPredicted RBP28.08■■■□□ 2.09
HOMER3-210ENST00000599097 UHRF1BP1Q6BDS2 1440 aa28.08■■■□□ 2.09
HOMER3-210ENST00000599097 CNTLNQ9NXG0 1405 aa28.08■■■□□ 2.09
HOMER3-210ENST00000599097 KIAA1107Q9UPP5 1409 aa28.07■■■□□ 2.08
HOMER3-210ENST00000599097 SYCP2Q9BX26 1530 aa28.06■■■□□ 2.08
HOMER3-210ENST00000599097 SAMD9LQ8IVG5 1584 aa28.06■■■□□ 2.08
HOMER3-210ENST00000599097 KIDINS220Q9ULH0 1771 aa28.06■■■□□ 2.08
HOMER3-210ENST00000599097 CFDP1Q9UEE9 299 aaPredicted RBP28.05■■■□□ 2.08
HOMER3-210ENST00000599097 SETD1BQ9UPS6 1966 aaKnown RBP28.04■■■□□ 2.08
HOMER3-210ENST00000599097 SPAG9O60271 1321 aaKnown RBP28.04■■■□□ 2.08
HOMER3-210ENST00000599097 DMRT2Q9Y5R5 561 aa28.03■■■□□ 2.08
HOMER3-210ENST00000599097 EHBP1L1Q8N3D4 1523 aa28.02■■■□□ 2.08
HOMER3-210ENST00000599097 CEBPAP49715 358 aaPredicted RBP28■■■□□ 2.07
HOMER3-210ENST00000599097 ATP7AQ04656 1500 aa27.98■■■□□ 2.07
HOMER3-210ENST00000599097 C3P01024 1663 aa27.97■■■□□ 2.07
HOMER3-210ENST00000599097 CEP162Q5TB80 1403 aa27.96■■■□□ 2.07
HOMER3-210ENST00000599097 HNRNPMP52272 730 aaKnown RBP eCLIP27.94■■■□□ 2.06
HOMER3-210ENST00000599097 INO80Q9ULG1 1556 aaPredicted RBP27.94■■■□□ 2.06
HOMER3-210ENST00000599097 MROH2AA6NES4 1674 aa27.93■■■□□ 2.06
HOMER3-210ENST00000599097 NPATQ14207 1427 aa27.9■■■□□ 2.06
HOMER3-210ENST00000599097 TIAM1Q13009 1591 aa27.9■■■□□ 2.06
HOMER3-210ENST00000599097 A2MP01023 1474 aa27.89■■■□□ 2.06
HOMER3-210ENST00000599097 PLXNC1O60486 1568 aa27.88■■■□□ 2.05
HOMER3-210ENST00000599097 CERKQ8TCT0 537 aa27.87■■■□□ 2.05
HOMER3-210ENST00000599097 ADGBQ8N7X0 1667 aa27.86■■■□□ 2.05
HOMER3-210ENST00000599097 SUPT6HQ7KZ85 1726 aaKnown RBP27.86■■■□□ 2.05
HOMER3-210ENST00000599097 PPP6R1Q9UPN7 881 aa27.85■■■□□ 2.05
HOMER3-210ENST00000599097 RTEL1-TNFRSF6BF6WH68 1400 aa27.83■■■□□ 2.05
HOMER3-210ENST00000599097 PTPRTO14522 1441 aa27.82■■■□□ 2.04
HOMER3-210ENST00000599097 STRCQ7RTU9 1775 aa27.81■■■□□ 2.04
HOMER3-210ENST00000599097 RSPH4AQ5TD94 716 aa27.8■■■□□ 2.04
HOMER3-210ENST00000599097 ZMYM3Q14202 1370 aa27.8■■■□□ 2.04
HOMER3-210ENST00000599097 MBD5Q9P267 1494 aa27.77■■■□□ 2.04
HOMER3-210ENST00000599097 NCOA2Q15596 1464 aa27.76■■■□□ 2.03
HOMER3-210ENST00000599097 CCDC141Q6ZP82 1450 aa27.76■■■□□ 2.03
HOMER3-210ENST00000599097 CLTCQ00610 1675 aaKnown RBP27.75■■■□□ 2.03
HOMER3-210ENST00000599097 GGT6Q6P531 493 aa27.74■■■□□ 2.03
HOMER3-210ENST00000599097 NCOA1Q15788 1441 aa27.74■■■□□ 2.03
HOMER3-210ENST00000599097 ZNF644Q9H582 1327 aaPredicted RBP27.73■■■□□ 2.03
HOMER3-210ENST00000599097 FAM135AQ9P2D6 1515 aa27.73■■■□□ 2.03
HOMER3-210ENST00000599097 CAMSAP2Q08AD1 1489 aa27.72■■■□□ 2.03
HOMER3-210ENST00000599097 VPS8Q8N3P4 1428 aa27.72■■■□□ 2.03
HOMER3-210ENST00000599097 DHX29Q7Z478 1369 aaKnown RBP27.71■■■□□ 2.03
HOMER3-210ENST00000599097 ZNF142P52746 1687 aaPredicted RBP27.68■■■□□ 2.02
HOMER3-210ENST00000599097 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
HOMER3-210ENST00000599097 MYO3AQ8NEV4 1616 aa27.67■■■□□ 2.02
HOMER3-210ENST00000599097 PTPRKQ15262 1439 aa27.67■■■□□ 2.02
HOMER3-210ENST00000599097 ARHGEF5Q12774 1597 aa27.65■■■□□ 2.02
HOMER3-210ENST00000599097 PLA2R1Q13018 1463 aa27.65■■■□□ 2.02
HOMER3-210ENST00000599097 TSPY4P0CV99 314 aa27.64■■■□□ 2.02
HOMER3-210ENST00000599097 TSPY10P0CW01 314 aa27.64■■■□□ 2.02
HOMER3-210ENST00000599097 CEP170BQ9Y4F5 1589 aaPredicted RBP27.64■■■□□ 2.01
HOMER3-210ENST00000599097 MAP3K1Q13233 1512 aa27.63■■■□□ 2.01
HOMER3-210ENST00000599097 IQSEC2Q5JU85 1478 aa27.63■■■□□ 2.01
HOMER3-210ENST00000599097 LRRC9Q6ZRR7 1453 aa27.63■■■□□ 2.01
HOMER3-210ENST00000599097 PKD2Q13563 968 aa27.62■■■□□ 2.01
HOMER3-210ENST00000599097 KDM5DQ9BY66 1539 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms