RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
ZNF548-209ENST00000598895 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
ZNF548-209ENST00000598895 DENND4BO75064 1496 aaPredicted RBP19.1■□□□□ 0.65
ZNF548-209ENST00000598895 EFCAB2Q5VUJ9 269 aa19.1■□□□□ 0.65
ZNF548-209ENST00000598895 SCAPERQ9BY12 1400 aa19.08■□□□□ 0.65
ZNF548-209ENST00000598895 ZNF777Q9ULD5 760 aaPredicted RBP19.05■□□□□ 0.64
ZNF548-209ENST00000598895 GPATCH8Q9UKJ3 1502 aaKnown RBP19.04■□□□□ 0.64
ZNF548-209ENST00000598895 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
ZNF548-209ENST00000598895 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
ZNF548-209ENST00000598895 AEBP2Q6ZN18 517 aaPredicted RBP19.03■□□□□ 0.64
ZNF548-209ENST00000598895 POGZQ7Z3K3 1410 aa19.02■□□□□ 0.64
ZNF548-209ENST00000598895 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
ZNF548-209ENST00000598895 ITSN2Q9NZM3 1697 aa19.01■□□□□ 0.63
ZNF548-209ENST00000598895 ABCC1P33527 1531 aa19■□□□□ 0.63
ZNF548-209ENST00000598895 KDM4FA0A1W2PPD8 638 aa19■□□□□ 0.63
ZNF548-209ENST00000598895 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
ZNF548-209ENST00000598895 ZMYM4Q5VZL5 1548 aa19■□□□□ 0.63
ZNF548-209ENST00000598895 NCOA2Q15596 1464 aa18.99■□□□□ 0.63
ZNF548-209ENST00000598895 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
ZNF548-209ENST00000598895 ARHGEF12Q9NZN5 1544 aa18.99■□□□□ 0.63
ZNF548-209ENST00000598895 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
ZNF548-209ENST00000598895 ZFYVE16Q7Z3T8 1539 aa18.98■□□□□ 0.63
ZNF548-209ENST00000598895 ARHGEF40Q8TER5 1519 aa18.98■□□□□ 0.63
ZNF548-209ENST00000598895 YEATS2Q9ULM3 1422 aa18.98■□□□□ 0.63
ZNF548-209ENST00000598895 APLP2Q06481 763 aa18.97■□□□□ 0.63
ZNF548-209ENST00000598895 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
ZNF548-209ENST00000598895 MAP3K1Q13233 1512 aa18.96■□□□□ 0.63
ZNF548-209ENST00000598895 MYT1LQ9UL68 1186 aa18.96■□□□□ 0.63
ZNF548-209ENST00000598895 ZNF518AQ6AHZ1 1483 aa18.96■□□□□ 0.63
ZNF548-209ENST00000598895 SYCP2Q9BX26 1530 aa18.95■□□□□ 0.62
ZNF548-209ENST00000598895 TRAPPC8Q9Y2L5 1435 aa18.95■□□□□ 0.62
ZNF548-209ENST00000598895 KDM5CP41229 1560 aa18.93■□□□□ 0.62
ZNF548-209ENST00000598895 HNRNPMP52272 730 aaKnown RBP eCLIP18.93■□□□□ 0.62
ZNF548-209ENST00000598895 ARID4BQ4LE39 1312 aaPredicted RBP18.93■□□□□ 0.62
ZNF548-209ENST00000598895 ZNF644Q9H582 1327 aaPredicted RBP18.93■□□□□ 0.62
ZNF548-209ENST00000598895 HECW2Q9P2P5 1572 aa18.92■□□□□ 0.62
ZNF548-209ENST00000598895 SIGLEC1Q9BZZ2 1709 aa18.91■□□□□ 0.62
ZNF548-209ENST00000598895 MAGI2Q86UL8 1455 aa18.91■□□□□ 0.62
ZNF548-209ENST00000598895 ABCA6Q8N139 1617 aa18.88■□□□□ 0.61
ZNF548-209ENST00000598895 PLEKHH2Q8IVE3 1493 aa18.87■□□□□ 0.61
ZNF548-209ENST00000598895 DIP2CQ9Y2E4 1556 aa18.87■□□□□ 0.61
ZNF548-209ENST00000598895 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
ZNF548-209ENST00000598895 CAMSAP2Q08AD1 1489 aa18.86■□□□□ 0.61
ZNF548-209ENST00000598895 KIDINS220Q9ULH0 1771 aa18.86■□□□□ 0.61
ZNF548-209ENST00000598895 ATP10AO60312 1499 aa18.85■□□□□ 0.61
ZNF548-209ENST00000598895 MLH3Q9UHC1 1453 aa18.84■□□□□ 0.61
ZNF548-209ENST00000598895 KIAA1107Q9UPP5 1409 aa18.84■□□□□ 0.61
ZNF548-209ENST00000598895 C9orf84Q5VXU9 1444 aa18.83■□□□□ 0.61
ZNF548-209ENST00000598895 MLECQ14165 292 aa18.83■□□□□ 0.6
ZNF548-209ENST00000598895 ADAMTSL3P82987 1691 aa18.82■□□□□ 0.6
ZNF548-209ENST00000598895 SPAG9O60271 1321 aaKnown RBP18.82■□□□□ 0.6
ZNF548-209ENST00000598895 MYOM3Q5VTT5 1437 aa18.82■□□□□ 0.6
ZNF548-209ENST00000598895 MADDQ8WXG6 1647 aa18.82■□□□□ 0.6
ZNF548-209ENST00000598895 INO80Q9ULG1 1556 aaPredicted RBP18.81■□□□□ 0.6
ZNF548-209ENST00000598895 ATP7AQ04656 1500 aa18.8■□□□□ 0.6
ZNF548-209ENST00000598895 MBD5Q9P267 1494 aa18.8■□□□□ 0.6
ZNF548-209ENST00000598895 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
ZNF548-209ENST00000598895 PPARGC1BQ86YN6 1023 aaKnown RBP18.77■□□□□ 0.6
ZNF548-209ENST00000598895 CCDC141Q6ZP82 1450 aa18.76■□□□□ 0.59
ZNF548-209ENST00000598895 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
ZNF548-209ENST00000598895 REREQ9P2R6 1566 aa18.75■□□□□ 0.59
ZNF548-209ENST00000598895 FER1L4A9Z1Z3 1794 aa18.75■□□□□ 0.59
ZNF548-209ENST00000598895 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
ZNF548-209ENST00000598895 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
ZNF548-209ENST00000598895 ARHGEF5Q12774 1597 aa18.73■□□□□ 0.59
ZNF548-209ENST00000598895 PTPRMP28827 1452 aa18.72■□□□□ 0.59
ZNF548-209ENST00000598895 ADGBQ8N7X0 1667 aa18.71■□□□□ 0.59
ZNF548-209ENST00000598895 FGD6Q6ZV73 1430 aa18.7■□□□□ 0.58
ZNF548-209ENST00000598895 A2MP01023 1474 aa18.7■□□□□ 0.58
ZNF548-209ENST00000598895 AGLP35573 1532 aa18.69■□□□□ 0.58
ZNF548-209ENST00000598895 RTEL1-TNFRSF6BF6WH68 1400 aa18.67■□□□□ 0.58
ZNF548-209ENST00000598895 TSPY4P0CV99 314 aa18.67■□□□□ 0.58
ZNF548-209ENST00000598895 TSPY10P0CW01 314 aa18.67■□□□□ 0.58
ZNF548-209ENST00000598895 RSPH4AQ5TD94 716 aa18.67■□□□□ 0.58
ZNF548-209ENST00000598895 PLXNC1O60486 1568 aa18.67■□□□□ 0.58
ZNF548-209ENST00000598895 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
ZNF548-209ENST00000598895 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
ZNF548-209ENST00000598895 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.58
ZNF548-209ENST00000598895 FAM50AQ14320 339 aaKnown RBP18.63■□□□□ 0.57
ZNF548-209ENST00000598895 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
ZNF548-209ENST00000598895 ABCC5O15440 1437 aa18.62■□□□□ 0.57
ZNF548-209ENST00000598895 DAPK1P53355 1430 aa18.61■□□□□ 0.57
ZNF548-209ENST00000598895 CEBPAP49715 358 aaPredicted RBP18.61■□□□□ 0.57
ZNF548-209ENST00000598895 GGT6Q6P531 493 aa18.61■□□□□ 0.57
ZNF548-209ENST00000598895 ESF1Q9H501 851 aaKnown RBP18.61■□□□□ 0.57
ZNF548-209ENST00000598895 DHX29Q7Z478 1369 aaKnown RBP18.6■□□□□ 0.57
ZNF548-209ENST00000598895 CLTCQ00610 1675 aaKnown RBP18.59■□□□□ 0.57
ZNF548-209ENST00000598895 CHIC2Q9UKJ5 165 aa18.58■□□□□ 0.56
ZNF548-209ENST00000598895 C3P01024 1663 aa18.57■□□□□ 0.56
ZNF548-209ENST00000598895 KIF3BO15066 747 aa18.57■□□□□ 0.56
ZNF548-209ENST00000598895 SHANK2Q9UPX8 1470 aa18.56■□□□□ 0.56
ZNF548-209ENST00000598895 RRP7BPQ9NSQ0 103 aa18.54■□□□□ 0.56
ZNF548-209ENST00000598895 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
ZNF548-209ENST00000598895 KIF15Q9NS87 1388 aa18.52■□□□□ 0.55
ZNF548-209ENST00000598895 CNTLNQ9NXG0 1405 aa18.51■□□□□ 0.55
ZNF548-209ENST00000598895 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
ZNF548-209ENST00000598895 ITGAEP38570 1179 aa18.51■□□□□ 0.55
ZNF548-209ENST00000598895 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
ZNF548-209ENST00000598895 LMTK3Q96Q04 1460 aa18.49■□□□□ 0.55
ZNF548-209ENST00000598895 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms