RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 EFCAB2Q5VUJ9 269 aa31.9■■■□□ 2.7
ARHGEF1-217ENST00000598812 SCAPERQ9BY12 1400 aa31.87■■■□□ 2.69
ARHGEF1-217ENST00000598812 ARHGEF40Q8TER5 1519 aa31.86■■■□□ 2.69
ARHGEF1-217ENST00000598812 ARHGAP5Q13017 1502 aa31.85■■■□□ 2.69
ARHGEF1-217ENST00000598812 ZMYM4Q5VZL5 1548 aa31.85■■■□□ 2.69
ARHGEF1-217ENST00000598812 POGZQ7Z3K3 1410 aa31.83■■■□□ 2.69
ARHGEF1-217ENST00000598812 ARID4BQ4LE39 1312 aaPredicted RBP31.82■■■□□ 2.68
ARHGEF1-217ENST00000598812 BCORL1Q5H9F3 1711 aa31.8■■■□□ 2.68
ARHGEF1-217ENST00000598812 CEP162Q5TB80 1403 aa31.8■■■□□ 2.68
ARHGEF1-217ENST00000598812 ZFYVE16Q7Z3T8 1539 aa31.79■■■□□ 2.68
ARHGEF1-217ENST00000598812 MAGI2Q86UL8 1455 aa31.78■■■□□ 2.68
ARHGEF1-217ENST00000598812 MADDQ8WXG6 1647 aa31.78■■■□□ 2.68
ARHGEF1-217ENST00000598812 LMTK3Q96Q04 1460 aa31.76■■■□□ 2.67
ARHGEF1-217ENST00000598812 PREX2Q70Z35 1606 aa31.74■■■□□ 2.67
ARHGEF1-217ENST00000598812 YEATS2Q9ULM3 1422 aa31.74■■■□□ 2.67
ARHGEF1-217ENST00000598812 CDC42BPBQ9Y5S2 1711 aa31.73■■■□□ 2.67
ARHGEF1-217ENST00000598812 ZNF518AQ6AHZ1 1483 aa31.71■■■□□ 2.67
ARHGEF1-217ENST00000598812 CDC42BPAQ5VT25 1732 aa31.66■■■□□ 2.66
ARHGEF1-217ENST00000598812 MTUS2Q5JR59 1369 aa31.65■■■□□ 2.66
ARHGEF1-217ENST00000598812 LOC105371045A0A1W2PR82 267 aa31.64■■■□□ 2.66
ARHGEF1-217ENST00000598812 AFAP1Q8N556 730 aa31.64■■■□□ 2.66
ARHGEF1-217ENST00000598812 RIMS1Q86UR5 1692 aaKnown RBP31.63■■■□□ 2.65
ARHGEF1-217ENST00000598812 KDM5CP41229 1560 aa31.62■■■□□ 2.65
ARHGEF1-217ENST00000598812 ABCC1P33527 1531 aa31.61■■■□□ 2.65
ARHGEF1-217ENST00000598812 ATP10AO60312 1499 aa31.61■■■□□ 2.65
ARHGEF1-217ENST00000598812 MYT1LQ9UL68 1186 aa31.61■■■□□ 2.65
ARHGEF1-217ENST00000598812 GPATCH8Q9UKJ3 1502 aaKnown RBP31.58■■■□□ 2.65
ARHGEF1-217ENST00000598812 SIGLEC1Q9BZZ2 1709 aa31.58■■■□□ 2.65
ARHGEF1-217ENST00000598812 C9orf84Q5VXU9 1444 aa31.58■■■□□ 2.65
ARHGEF1-217ENST00000598812 ZNF777Q9ULD5 760 aaPredicted RBP31.56■■■□□ 2.64
ARHGEF1-217ENST00000598812 ITSN2Q9NZM3 1697 aa31.56■■■□□ 2.64
ARHGEF1-217ENST00000598812 CCNB3Q8WWL7 1395 aa31.56■■■□□ 2.64
ARHGEF1-217ENST00000598812 ARHGEF12Q9NZN5 1544 aa31.55■■■□□ 2.64
ARHGEF1-217ENST00000598812 TRAPPC8Q9Y2L5 1435 aa31.54■■■□□ 2.64
ARHGEF1-217ENST00000598812 EHBP1L1Q8N3D4 1523 aa31.54■■■□□ 2.64
ARHGEF1-217ENST00000598812 MLECQ14165 292 aa31.53■■■□□ 2.64
ARHGEF1-217ENST00000598812 MLH3Q9UHC1 1453 aa31.52■■■□□ 2.64
ARHGEF1-217ENST00000598812 CFDP1Q9UEE9 299 aaPredicted RBP31.51■■■□□ 2.63
ARHGEF1-217ENST00000598812 SAMD9LQ8IVG5 1584 aa31.5■■■□□ 2.63
ARHGEF1-217ENST00000598812 DIP2CQ9Y2E4 1556 aa31.47■■■□□ 2.63
ARHGEF1-217ENST00000598812 SYCP2Q9BX26 1530 aa31.45■■■□□ 2.63
ARHGEF1-217ENST00000598812 VPS8Q8N3P4 1428 aa31.45■■■□□ 2.63
ARHGEF1-217ENST00000598812 PLEKHH2Q8IVE3 1493 aa31.45■■■□□ 2.62
ARHGEF1-217ENST00000598812 ABCA6Q8N139 1617 aa31.44■■■□□ 2.62
ARHGEF1-217ENST00000598812 FER1L4A9Z1Z3 1794 aa31.43■■■□□ 2.62
ARHGEF1-217ENST00000598812 TIAM1Q13009 1591 aa31.42■■■□□ 2.62
ARHGEF1-217ENST00000598812 KIAA1107Q9UPP5 1409 aa31.41■■■□□ 2.62
ARHGEF1-217ENST00000598812 HNRNPMP52272 730 aaKnown RBP eCLIP31.41■■■□□ 2.62
ARHGEF1-217ENST00000598812 REREQ9P2R6 1566 aa31.41■■■□□ 2.62
ARHGEF1-217ENST00000598812 PLPPR3Q6T4P5 718 aa31.4■■■□□ 2.62
ARHGEF1-217ENST00000598812 HSPA2P54652 639 aa31.39■■■□□ 2.62
ARHGEF1-217ENST00000598812 KIDINS220Q9ULH0 1771 aa31.38■■■□□ 2.61
ARHGEF1-217ENST00000598812 SPAG9O60271 1321 aaKnown RBP31.37■■■□□ 2.61
ARHGEF1-217ENST00000598812 SUPT6HQ7KZ85 1726 aaKnown RBP31.35■■■□□ 2.61
ARHGEF1-217ENST00000598812 NCOA2Q15596 1464 aa31.33■■■□□ 2.61
ARHGEF1-217ENST00000598812 AGLP35573 1532 aa31.32■■■□□ 2.6
ARHGEF1-217ENST00000598812 ZNF644Q9H582 1327 aaPredicted RBP31.3■■■□□ 2.6
ARHGEF1-217ENST00000598812 CERKQ8TCT0 537 aa31.29■■■□□ 2.6
ARHGEF1-217ENST00000598812 ATP7AQ04656 1500 aa31.29■■■□□ 2.6
ARHGEF1-217ENST00000598812 LRRC9Q6ZRR7 1453 aa31.27■■■□□ 2.6
ARHGEF1-217ENST00000598812 INO80Q9ULG1 1556 aaPredicted RBP31.26■■■□□ 2.59
ARHGEF1-217ENST00000598812 ESF1Q9H501 851 aaKnown RBP31.24■■■□□ 2.59
ARHGEF1-217ENST00000598812 MAP3K1Q13233 1512 aa31.23■■■□□ 2.59
ARHGEF1-217ENST00000598812 PREX1Q8TCU6 1659 aa31.22■■■□□ 2.59
ARHGEF1-217ENST00000598812 MBD5Q9P267 1494 aa31.21■■■□□ 2.59
ARHGEF1-217ENST00000598812 CEBPAP49715 358 aaPredicted RBP31.2■■■□□ 2.59
ARHGEF1-217ENST00000598812 CAMSAP2Q08AD1 1489 aa31.19■■■□□ 2.58
ARHGEF1-217ENST00000598812 A2MP01023 1474 aa31.17■■■□□ 2.58
ARHGEF1-217ENST00000598812 KANK4Q5T7N3 995 aaPredicted RBP31.15■■■□□ 2.58
ARHGEF1-217ENST00000598812 STRCQ7RTU9 1775 aa31.14■■■□□ 2.58
ARHGEF1-217ENST00000598812 PLXNC1O60486 1568 aa31.13■■■□□ 2.57
ARHGEF1-217ENST00000598812 APLP2Q06481 763 aa31.13■■■□□ 2.57
ARHGEF1-217ENST00000598812 ILDR2Q71H61 639 aa31.13■■■□□ 2.57
ARHGEF1-217ENST00000598812 RTEL1-TNFRSF6BF6WH68 1400 aa31.13■■■□□ 2.57
ARHGEF1-217ENST00000598812 CNTLNQ9NXG0 1405 aa31.13■■■□□ 2.57
ARHGEF1-217ENST00000598812 CCDC141Q6ZP82 1450 aa31.13■■■□□ 2.57
ARHGEF1-217ENST00000598812 RSPH4AQ5TD94 716 aa31.12■■■□□ 2.57
ARHGEF1-217ENST00000598812 ADGBQ8N7X0 1667 aa31.12■■■□□ 2.57
ARHGEF1-217ENST00000598812 C3P01024 1663 aa31.09■■■□□ 2.57
ARHGEF1-217ENST00000598812 DISP3Q9P2K9 1392 aa31.08■■■□□ 2.57
ARHGEF1-217ENST00000598812 SETD1BQ9UPS6 1966 aaKnown RBP31.05■■■□□ 2.56
ARHGEF1-217ENST00000598812 ARHGEF5Q12774 1597 aa31.05■■■□□ 2.56
ARHGEF1-217ENST00000598812 SOCS7O14512 581 aa31.04■■■□□ 2.56
ARHGEF1-217ENST00000598812 SPATA31D1Q6ZQQ2 1576 aa31.04■■■□□ 2.56
ARHGEF1-217ENST00000598812 MYOM3Q5VTT5 1437 aa31.03■■■□□ 2.56
ARHGEF1-217ENST00000598812 UHRF1BP1Q6BDS2 1440 aa31.03■■■□□ 2.56
ARHGEF1-217ENST00000598812 TSPY4P0CV99 314 aa31.02■■■□□ 2.56
ARHGEF1-217ENST00000598812 TSPY10P0CW01 314 aa31.02■■■□□ 2.56
ARHGEF1-217ENST00000598812 GGT6Q6P531 493 aa31.02■■■□□ 2.56
ARHGEF1-217ENST00000598812 MROH2AA6NES4 1674 aa31■■■□□ 2.55
ARHGEF1-217ENST00000598812 MIA2Q96PC5 1412 aa31■■■□□ 2.55
ARHGEF1-217ENST00000598812 DHX29Q7Z478 1369 aaKnown RBP31■■■□□ 2.55
ARHGEF1-217ENST00000598812 ZMYM3Q14202 1370 aa30.97■■■□□ 2.55
ARHGEF1-217ENST00000598812 CLTCQ00610 1675 aaKnown RBP30.97■■■□□ 2.55
ARHGEF1-217ENST00000598812 PPP6R1Q9UPN7 881 aa30.95■■■□□ 2.55
ARHGEF1-217ENST00000598812 NPATQ14207 1427 aa30.92■■■□□ 2.54
ARHGEF1-217ENST00000598812 KIF3BO15066 747 aa30.91■■■□□ 2.54
ARHGEF1-217ENST00000598812 MAST1Q9Y2H9 1570 aa30.88■■■□□ 2.53
ARHGEF1-217ENST00000598812 PTPRTO14522 1441 aa30.86■■■□□ 2.53
ARHGEF1-217ENST00000598812 LTBP4Q8N2S1 1624 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms