RNA–Protein interactions for RNA: ENST00000598697.5

TRPM4-211, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-211ENST00000598697 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
TRPM4-211ENST00000598697 PHLDB1Q86UU1 1377 aa20.54■□□□□ 0.88
TRPM4-211ENST00000598697 FRAT1Q92837 279 aaPredicted RBP20.53■□□□□ 0.88
TRPM4-211ENST00000598697 FMN1Q68DA7 1419 aa20.52■□□□□ 0.88
TRPM4-211ENST00000598697 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.88
TRPM4-211ENST00000598697 TIAM1Q13009 1591 aa20.52■□□□□ 0.88
TRPM4-211ENST00000598697 MAPKBP1O60336 1514 aa20.51■□□□□ 0.87
TRPM4-211ENST00000598697 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
TRPM4-211ENST00000598697 FGD1P98174 961 aa20.49■□□□□ 0.87
TRPM4-211ENST00000598697 NAP1L5Q96NT1 182 aaPredicted RBP20.49■□□□□ 0.87
TRPM4-211ENST00000598697 CTTNBP2Q8WZ74 1663 aa20.48■□□□□ 0.87
TRPM4-211ENST00000598697 AAMPQ13685 434 aa20.47■□□□□ 0.87
TRPM4-211ENST00000598697 WDR62O43379 1518 aa20.47■□□□□ 0.87
TRPM4-211ENST00000598697 CASKIN1Q8WXD9 1431 aa20.46■□□□□ 0.87
TRPM4-211ENST00000598697 EFCAB5A4FU69 1503 aa20.46■□□□□ 0.87
TRPM4-211ENST00000598697 RRBP1Q9P2E9 1410 aaKnown RBP20.45■□□□□ 0.86
TRPM4-211ENST00000598697 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
TRPM4-211ENST00000598697 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
TRPM4-211ENST00000598697 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
TRPM4-211ENST00000598697 FYCO1Q9BQS8 1478 aa20.41■□□□□ 0.86
TRPM4-211ENST00000598697 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
TRPM4-211ENST00000598697 RRP9O43818 475 aaKnown RBP20.39■□□□□ 0.85
TRPM4-211ENST00000598697 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
TRPM4-211ENST00000598697 DCAF11Q8TEB1 546 aa20.37■□□□□ 0.85
TRPM4-211ENST00000598697 EIF4G3O43432 1585 aaKnown RBP20.37■□□□□ 0.85
TRPM4-211ENST00000598697 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
TRPM4-211ENST00000598697 SETD5Q9C0A6 1442 aa20.37■□□□□ 0.85
TRPM4-211ENST00000598697 NFKBIBQ15653 356 aa20.37■□□□□ 0.85
TRPM4-211ENST00000598697 TONSLQ96HA7 1378 aa20.36■□□□□ 0.85
TRPM4-211ENST00000598697 BCL11BQ9C0K0 894 aaPredicted RBP20.35■□□□□ 0.85
TRPM4-211ENST00000598697 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
TRPM4-211ENST00000598697 ARID4BQ4LE39 1312 aaPredicted RBP20.34■□□□□ 0.85
TRPM4-211ENST00000598697 GRIN2AQ12879 1464 aa20.33■□□□□ 0.84
TRPM4-211ENST00000598697 AKNAQ7Z591 1439 aa20.33■□□□□ 0.84
TRPM4-211ENST00000598697 PDIA4P13667 645 aaKnown RBP20.32■□□□□ 0.84
TRPM4-211ENST00000598697 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
TRPM4-211ENST00000598697 RRAGDQ9NQL2 400 aaPredicted RBP20.32■□□□□ 0.84
TRPM4-211ENST00000598697 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
TRPM4-211ENST00000598697 SKAP1Q86WV1 359 aa20.31■□□□□ 0.84
TRPM4-211ENST00000598697 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
TRPM4-211ENST00000598697 POLR3GLQ9BT43 218 aa20.3■□□□□ 0.84
TRPM4-211ENST00000598697 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
TRPM4-211ENST00000598697 RRP7BPQ9NSQ0 103 aa20.29■□□□□ 0.84
TRPM4-211ENST00000598697 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
TRPM4-211ENST00000598697 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
TRPM4-211ENST00000598697 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.84
TRPM4-211ENST00000598697 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.84
TRPM4-211ENST00000598697 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
TRPM4-211ENST00000598697 PNNQ9H307 717 aaKnown RBP20.27■□□□□ 0.83
TRPM4-211ENST00000598697 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
TRPM4-211ENST00000598697 FGD6Q6ZV73 1430 aa20.24■□□□□ 0.83
TRPM4-211ENST00000598697 CFAP43Q8NDM7 1665 aa20.24■□□□□ 0.83
TRPM4-211ENST00000598697 SYNJ2O15056 1496 aa20.24■□□□□ 0.83
TRPM4-211ENST00000598697 MAGI1Q96QZ7 1491 aaPredicted RBP20.22■□□□□ 0.83
TRPM4-211ENST00000598697 RGS3P49796 1198 aa20.21■□□□□ 0.83
TRPM4-211ENST00000598697 ARXQ96QS3 562 aa20.21■□□□□ 0.83
TRPM4-211ENST00000598697 EPRSP07814 1512 aaKnown RBP20.2■□□□□ 0.82
TRPM4-211ENST00000598697 PDE4AP27815 886 aa20.19■□□□□ 0.82
TRPM4-211ENST00000598697 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
TRPM4-211ENST00000598697 ZNF644Q9H582 1327 aaPredicted RBP20.17■□□□□ 0.82
TRPM4-211ENST00000598697 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
TRPM4-211ENST00000598697 MYOM3Q5VTT5 1437 aa20.17■□□□□ 0.82
TRPM4-211ENST00000598697 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
TRPM4-211ENST00000598697 PLB1Q6P1J6 1458 aa20.16■□□□□ 0.82
TRPM4-211ENST00000598697 CARMIL2Q6F5E8 1435 aa20.15■□□□□ 0.82
TRPM4-211ENST00000598697 MAGI3Q5TCQ9 1506 aa20.15■□□□□ 0.82
TRPM4-211ENST00000598697 FRAT2O75474 233 aaPredicted RBP20.15■□□□□ 0.82
TRPM4-211ENST00000598697 CEP170Q5SW79 1584 aa20.14■□□□□ 0.81
TRPM4-211ENST00000598697 UGGT2Q9NYU1 1516 aa20.14■□□□□ 0.81
TRPM4-211ENST00000598697 LRRIQ1Q96JM4 1722 aa20.13■□□□□ 0.81
TRPM4-211ENST00000598697 CCDC18Q5T9S5 1454 aa20.12■□□□□ 0.81
TRPM4-211ENST00000598697 HECW1Q76N89 1606 aa20.12■□□□□ 0.81
TRPM4-211ENST00000598697 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
TRPM4-211ENST00000598697 PTPRKQ15262 1439 aa20.12■□□□□ 0.81
TRPM4-211ENST00000598697 EXOC6Q8TAG9 804 aa20.11■□□□□ 0.81
TRPM4-211ENST00000598697 KIAA0556O60303 1618 aa20.1■□□□□ 0.81
TRPM4-211ENST00000598697 PLEKHD1A6NEE1 506 aa20.1■□□□□ 0.81
TRPM4-211ENST00000598697 CFDP1Q9UEE9 299 aaPredicted RBP20.1■□□□□ 0.81
TRPM4-211ENST00000598697 EHBP1L1Q8N3D4 1523 aa20.1■□□□□ 0.81
TRPM4-211ENST00000598697 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
TRPM4-211ENST00000598697 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.8
TRPM4-211ENST00000598697 EIF4G2P78344 907 aaKnown RBP eCLIP20.07■□□□□ 0.88e-7■■■□□ 16.1
TRPM4-211ENST00000598697 FOXD1Q16676 465 aa20.07■□□□□ 0.8
TRPM4-211ENST00000598697 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
TRPM4-211ENST00000598697 BACH2Q9BYV9 841 aa20.07■□□□□ 0.8
TRPM4-211ENST00000598697 TCERG1O14776 1098 aaKnown RBP20.06■□□□□ 0.8
TRPM4-211ENST00000598697 NUDCQ9Y266 331 aa20.06■□□□□ 0.8
TRPM4-211ENST00000598697 PRDM4Q9UKN5 801 aa20.04■□□□□ 0.8
TRPM4-211ENST00000598697 NUP160Q12769 1436 aa20.03■□□□□ 0.8
TRPM4-211ENST00000598697 BBXQ8WY36 941 aaPredicted RBP20.02■□□□□ 0.79
TRPM4-211ENST00000598697 PTPRGP23470 1445 aa20.02■□□□□ 0.79
TRPM4-211ENST00000598697 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
TRPM4-211ENST00000598697 POGKQ9P215 609 aa19.99■□□□□ 0.79
TRPM4-211ENST00000598697 PTPN23Q9H3S7 1636 aa19.98■□□□□ 0.79
TRPM4-211ENST00000598697 RAPGEF6Q8TEU7 1601 aa19.98■□□□□ 0.79
TRPM4-211ENST00000598697 PLIN1O60240 522 aa19.97■□□□□ 0.79
TRPM4-211ENST00000598697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.97■□□□□ 0.791e-7■■□□□ 12.3
TRPM4-211ENST00000598697 CLCN1P35523 988 aa19.97■□□□□ 0.79
TRPM4-211ENST00000598697 PDCL3Q9H2J4 239 aa19.97■□□□□ 0.79
TRPM4-211ENST00000598697 L1TD1Q5T7N2 865 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms