RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 MYOM3Q5VTT5 1437 aa24.54■■□□□ 1.52
LTBP4-222ENST00000598256 ADGRL1O94910 1474 aa24.53■■□□□ 1.52
LTBP4-222ENST00000598256 COL17A1Q9UMD9 1497 aaPredicted RBP24.53■■□□□ 1.52
LTBP4-222ENST00000598256 GPATCH8Q9UKJ3 1502 aaKnown RBP24.53■■□□□ 1.52
LTBP4-222ENST00000598256 ARHGAP5Q13017 1502 aa24.52■■□□□ 1.52
LTBP4-222ENST00000598256 CFAP74Q9C0B2 1584 aa24.52■■□□□ 1.52
LTBP4-222ENST00000598256 ARAP3Q8WWN8 1544 aa24.51■■□□□ 1.51
LTBP4-222ENST00000598256 CD109Q6YHK3 1445 aa24.51■■□□□ 1.51
LTBP4-222ENST00000598256 PLCH2O75038 1416 aa24.48■■□□□ 1.51
LTBP4-222ENST00000598256 PTPN23Q9H3S7 1636 aa24.48■■□□□ 1.51
LTBP4-222ENST00000598256 FGD6Q6ZV73 1430 aa24.46■■□□□ 1.51
LTBP4-222ENST00000598256 MIA2Q96PC5 1412 aa24.44■■□□□ 1.5
LTBP4-222ENST00000598256 SAMD9LQ8IVG5 1584 aa24.44■■□□□ 1.5
LTBP4-222ENST00000598256 CFDP1Q9UEE9 299 aaPredicted RBP24.43■■□□□ 1.5
LTBP4-222ENST00000598256 FANCAO15360 1455 aa24.43■■□□□ 1.5
LTBP4-222ENST00000598256 TEX14Q8IWB6 1497 aa24.42■■□□□ 1.5
LTBP4-222ENST00000598256 CAMSAP2Q08AD1 1489 aa24.41■■□□□ 1.5
LTBP4-222ENST00000598256 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
LTBP4-222ENST00000598256 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
LTBP4-222ENST00000598256 TCOF1Q13428 1488 aaKnown RBP24.38■■□□□ 1.49
LTBP4-222ENST00000598256 ABCC1P33527 1531 aa24.37■■□□□ 1.49
LTBP4-222ENST00000598256 NEO1Q92859 1461 aa24.37■■□□□ 1.49
LTBP4-222ENST00000598256 HECW2Q9P2P5 1572 aa24.37■■□□□ 1.49
LTBP4-222ENST00000598256 EFCAB2Q5VUJ9 269 aa24.36■■□□□ 1.49
LTBP4-222ENST00000598256 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
LTBP4-222ENST00000598256 PLEKHH2Q8IVE3 1493 aa24.34■■□□□ 1.49
LTBP4-222ENST00000598256 CROCC2H7BZ55 1655 aa24.32■■□□□ 1.48
LTBP4-222ENST00000598256 AKNAQ7Z591 1439 aa24.32■■□□□ 1.48
LTBP4-222ENST00000598256 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
LTBP4-222ENST00000598256 DNMT1P26358 1616 aaKnown RBP24.31■■□□□ 1.48
LTBP4-222ENST00000598256 ZNF644Q9H582 1327 aaPredicted RBP24.3■■□□□ 1.48
LTBP4-222ENST00000598256 ARHGEF5Q12774 1597 aa24.29■■□□□ 1.48
LTBP4-222ENST00000598256 RICTORQ6R327 1708 aa24.26■■□□□ 1.47
LTBP4-222ENST00000598256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.26■■□□□ 1.47
LTBP4-222ENST00000598256 KIAA1107Q9UPP5 1409 aa24.25■■□□□ 1.47
LTBP4-222ENST00000598256 SCAPERQ9BY12 1400 aa24.24■■□□□ 1.47
LTBP4-222ENST00000598256 ARHGEF12Q9NZN5 1544 aa24.24■■□□□ 1.47
LTBP4-222ENST00000598256 ADGBQ8N7X0 1667 aa24.22■■□□□ 1.47
LTBP4-222ENST00000598256 CCDC141Q6ZP82 1450 aa24.22■■□□□ 1.47
LTBP4-222ENST00000598256 DENND4BO75064 1496 aaPredicted RBP24.2■■□□□ 1.47
LTBP4-222ENST00000598256 MBD5Q9P267 1494 aa24.2■■□□□ 1.47
LTBP4-222ENST00000598256 DAPK1P53355 1430 aa24.19■■□□□ 1.46
LTBP4-222ENST00000598256 HNRNPMP52272 730 aaKnown RBP eCLIP24.19■■□□□ 1.46
LTBP4-222ENST00000598256 FRMPD1Q5SYB0 1578 aa24.19■■□□□ 1.46
LTBP4-222ENST00000598256 ZNF518AQ6AHZ1 1483 aa24.19■■□□□ 1.46
LTBP4-222ENST00000598256 POGZQ7Z3K3 1410 aa24.18■■□□□ 1.46
LTBP4-222ENST00000598256 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
LTBP4-222ENST00000598256 TRAPPC8Q9Y2L5 1435 aa24.18■■□□□ 1.46
LTBP4-222ENST00000598256 KDM5CP41229 1560 aa24.16■■□□□ 1.46
LTBP4-222ENST00000598256 MAST1Q9Y2H9 1570 aa24.16■■□□□ 1.46
LTBP4-222ENST00000598256 SHANK2Q9UPX8 1470 aa24.15■■□□□ 1.46
LTBP4-222ENST00000598256 ITGAEP38570 1179 aa24.15■■□□□ 1.46
LTBP4-222ENST00000598256 ABCC5O15440 1437 aa24.15■■□□□ 1.46
LTBP4-222ENST00000598256 INO80Q9ULG1 1556 aaPredicted RBP24.14■■□□□ 1.45
LTBP4-222ENST00000598256 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
LTBP4-222ENST00000598256 ZMYM4Q5VZL5 1548 aa24.11■■□□□ 1.45
LTBP4-222ENST00000598256 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
LTBP4-222ENST00000598256 ATP7AQ04656 1500 aa24.1■■□□□ 1.45
LTBP4-222ENST00000598256 ZFYVE16Q7Z3T8 1539 aa24.1■■□□□ 1.45
LTBP4-222ENST00000598256 KIDINS220Q9ULH0 1771 aa24.1■■□□□ 1.45
LTBP4-222ENST00000598256 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
LTBP4-222ENST00000598256 RAPGEF3O95398 923 aa24.07■■□□□ 1.44
LTBP4-222ENST00000598256 TSPY4P0CV99 314 aa24.07■■□□□ 1.44
LTBP4-222ENST00000598256 TSPY10P0CW01 314 aa24.07■■□□□ 1.44
LTBP4-222ENST00000598256 AFAP1Q8N556 730 aa24.07■■□□□ 1.44
LTBP4-222ENST00000598256 PTPRKQ15262 1439 aa24.07■■□□□ 1.44
LTBP4-222ENST00000598256 GCC2Q8IWJ2 1684 aa24.06■■□□□ 1.44
LTBP4-222ENST00000598256 FBXO41Q8TF61 875 aa24.05■■□□□ 1.44
LTBP4-222ENST00000598256 SPAG9O60271 1321 aaKnown RBP24.05■■□□□ 1.44
LTBP4-222ENST00000598256 ABCA6Q8N139 1617 aa24.04■■□□□ 1.44
LTBP4-222ENST00000598256 MYT1LQ9UL68 1186 aa24.04■■□□□ 1.44
LTBP4-222ENST00000598256 ADGRL2O95490 1459 aa24.04■■□□□ 1.44
LTBP4-222ENST00000598256 MLH3Q9UHC1 1453 aa24.03■■□□□ 1.44
LTBP4-222ENST00000598256 RTEL1-TNFRSF6BF6WH68 1400 aa24.02■■□□□ 1.44
LTBP4-222ENST00000598256 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
LTBP4-222ENST00000598256 ARHGEF40Q8TER5 1519 aa24■■□□□ 1.43
LTBP4-222ENST00000598256 ANKRD30AQ9BXX3 1397 aa24■■□□□ 1.43
LTBP4-222ENST00000598256 DIP2CQ9Y2E4 1556 aa23.99■■□□□ 1.43
LTBP4-222ENST00000598256 MAGI2Q86UL8 1455 aa23.99■■□□□ 1.43
LTBP4-222ENST00000598256 ROCK1Q13464 1354 aa23.98■■□□□ 1.43
LTBP4-222ENST00000598256 PCGF6Q9BYE7 350 aa23.96■■□□□ 1.43
LTBP4-222ENST00000598256 NCOA1Q15788 1441 aa23.95■■□□□ 1.42
LTBP4-222ENST00000598256 YEATS2Q9ULM3 1422 aa23.93■■□□□ 1.42
LTBP4-222ENST00000598256 KIF15Q9NS87 1388 aa23.93■■□□□ 1.42
LTBP4-222ENST00000598256 RRP7BPQ9NSQ0 103 aa23.93■■□□□ 1.42
LTBP4-222ENST00000598256 DUOX2Q9NRD8 1548 aa23.93■■□□□ 1.42
LTBP4-222ENST00000598256 HFM1A2PYH4 1435 aa23.92■■□□□ 1.42
LTBP4-222ENST00000598256 PTPRMP28827 1452 aa23.91■■□□□ 1.42
LTBP4-222ENST00000598256 EIF2AK4Q9P2K8 1649 aaKnown RBP23.89■■□□□ 1.42
LTBP4-222ENST00000598256 NAIPQ13075 1403 aa23.89■■□□□ 1.41
LTBP4-222ENST00000598256 ADAMTSL3P82987 1691 aa23.89■■□□□ 1.41
LTBP4-222ENST00000598256 A2MP01023 1474 aa23.88■■□□□ 1.41
LTBP4-222ENST00000598256 REREQ9P2R6 1566 aa23.88■■□□□ 1.41
LTBP4-222ENST00000598256 ATP10AO60312 1499 aa23.87■■□□□ 1.41
LTBP4-222ENST00000598256 ERBINQ96RT1 1412 aa23.85■■□□□ 1.41
LTBP4-222ENST00000598256 ANKRD50Q9ULJ7 1429 aa23.84■■□□□ 1.41
LTBP4-222ENST00000598256 BCORL1Q5H9F3 1711 aa23.84■■□□□ 1.41
LTBP4-222ENST00000598256 SIGLEC1Q9BZZ2 1709 aa23.84■■□□□ 1.41
LTBP4-222ENST00000598256 SETD5Q9C0A6 1442 aa23.84■■□□□ 1.41
LTBP4-222ENST00000598256 DHX29Q7Z478 1369 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms