RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 POGZQ7Z3K3 1410 aa34.8■■■■□ 3.16
SYMPK-208ENST00000598059 CASKIN1Q8WXD9 1431 aa34.8■■■■□ 3.16
SYMPK-208ENST00000598059 MAGI2Q86UL8 1455 aa34.79■■■■□ 3.16
SYMPK-208ENST00000598059 ZFYVE16Q7Z3T8 1539 aa34.79■■■■□ 3.16
SYMPK-208ENST00000598059 PCF11O94913 1555 aaKnown RBP34.79■■■■□ 3.16
SYMPK-208ENST00000598059 MADDQ8WXG6 1647 aa34.78■■■■□ 3.16
SYMPK-208ENST00000598059 YEATS2Q9ULM3 1422 aa34.78■■■■□ 3.16
SYMPK-208ENST00000598059 CCDC18Q5T9S5 1454 aa34.74■■■■□ 3.15
SYMPK-208ENST00000598059 SIGLEC1Q9BZZ2 1709 aa34.71■■■■□ 3.15
SYMPK-208ENST00000598059 ARHGAP5Q13017 1502 aa34.71■■■■□ 3.15
SYMPK-208ENST00000598059 FYCO1Q9BQS8 1478 aa34.66■■■■□ 3.14
SYMPK-208ENST00000598059 CDC42BPBQ9Y5S2 1711 aa34.65■■■■□ 3.14
SYMPK-208ENST00000598059 RIMS1Q86UR5 1692 aaKnown RBP34.65■■■■□ 3.14
SYMPK-208ENST00000598059 ZNF518AQ6AHZ1 1483 aa34.62■■■■□ 3.13
SYMPK-208ENST00000598059 ATP10AO60312 1499 aa34.6■■■■□ 3.13
SYMPK-208ENST00000598059 PREX2Q70Z35 1606 aa34.59■■■■□ 3.13
SYMPK-208ENST00000598059 AFAP1Q8N556 730 aa34.58■■■■□ 3.13
SYMPK-208ENST00000598059 KDM5CP41229 1560 aa34.57■■■■□ 3.13
SYMPK-208ENST00000598059 C9orf84Q5VXU9 1444 aa34.55■■■■□ 3.12
SYMPK-208ENST00000598059 MLECQ14165 292 aa34.54■■■■□ 3.12
SYMPK-208ENST00000598059 CDC42BPAQ5VT25 1732 aa34.51■■■■□ 3.12
SYMPK-208ENST00000598059 FER1L4A9Z1Z3 1794 aa34.5■■■■□ 3.11
SYMPK-208ENST00000598059 ILDR1Q86SU0 546 aaPredicted RBP34.5■■■■□ 3.11
SYMPK-208ENST00000598059 LMTK3Q96Q04 1460 aa34.49■■■■□ 3.11
SYMPK-208ENST00000598059 ABCC1P33527 1531 aa34.49■■■■□ 3.11
SYMPK-208ENST00000598059 ARHGEF12Q9NZN5 1544 aa34.47■■■■□ 3.11
SYMPK-208ENST00000598059 TRAPPC8Q9Y2L5 1435 aa34.45■■■■□ 3.11
SYMPK-208ENST00000598059 MLH3Q9UHC1 1453 aa34.45■■■■□ 3.1
SYMPK-208ENST00000598059 PLPPR3Q6T4P5 718 aa34.44■■■■□ 3.1
SYMPK-208ENST00000598059 MYT1LQ9UL68 1186 aa34.44■■■■□ 3.1
SYMPK-208ENST00000598059 ITSN2Q9NZM3 1697 aa34.44■■■■□ 3.1
SYMPK-208ENST00000598059 DIP2CQ9Y2E4 1556 aa34.43■■■■□ 3.1
SYMPK-208ENST00000598059 ABCA6Q8N139 1617 aa34.39■■■■□ 3.1
SYMPK-208ENST00000598059 GPATCH8Q9UKJ3 1502 aaKnown RBP34.39■■■■□ 3.1
SYMPK-208ENST00000598059 REREQ9P2R6 1566 aa34.38■■■■□ 3.09
SYMPK-208ENST00000598059 SAMD9LQ8IVG5 1584 aa34.34■■■■□ 3.09
SYMPK-208ENST00000598059 ZNF777Q9ULD5 760 aaPredicted RBP34.34■■■■□ 3.09
SYMPK-208ENST00000598059 CEP162Q5TB80 1403 aa34.32■■■■□ 3.08
SYMPK-208ENST00000598059 KIDINS220Q9ULH0 1771 aa34.32■■■■□ 3.08
SYMPK-208ENST00000598059 MTUS2Q5JR59 1369 aa34.31■■■■□ 3.08
SYMPK-208ENST00000598059 HSPA2P54652 639 aa34.29■■■■□ 3.08
SYMPK-208ENST00000598059 SYCP2Q9BX26 1530 aa34.28■■■■□ 3.08
SYMPK-208ENST00000598059 CCNB3Q8WWL7 1395 aa34.27■■■■□ 3.08
SYMPK-208ENST00000598059 AGLP35573 1532 aa34.27■■■■□ 3.08
SYMPK-208ENST00000598059 CFDP1Q9UEE9 299 aaPredicted RBP34.26■■■■□ 3.08
SYMPK-208ENST00000598059 CEBPAP49715 358 aaPredicted RBP34.25■■■■□ 3.07
SYMPK-208ENST00000598059 HNRNPMP52272 730 aaKnown RBP eCLIP34.24■■■■□ 3.07
SYMPK-208ENST00000598059 KIAA1107Q9UPP5 1409 aa34.22■■■■□ 3.07
SYMPK-208ENST00000598059 PLEKHH2Q8IVE3 1493 aa34.2■■■■□ 3.07
SYMPK-208ENST00000598059 EHBP1L1Q8N3D4 1523 aa34.2■■■■□ 3.06
SYMPK-208ENST00000598059 PREX1Q8TCU6 1659 aa34.19■■■■□ 3.06
SYMPK-208ENST00000598059 SPAG9O60271 1321 aaKnown RBP34.19■■■■□ 3.06
SYMPK-208ENST00000598059 SETD1BQ9UPS6 1966 aaKnown RBP34.17■■■■□ 3.06
SYMPK-208ENST00000598059 TIAM1Q13009 1591 aa34.15■■■■□ 3.06
SYMPK-208ENST00000598059 ATP7AQ04656 1500 aa34.12■■■■□ 3.05
SYMPK-208ENST00000598059 C3P01024 1663 aa34.12■■■■□ 3.05
SYMPK-208ENST00000598059 ESF1Q9H501 851 aaKnown RBP34.11■■■■□ 3.05
SYMPK-208ENST00000598059 INO80Q9ULG1 1556 aaPredicted RBP34.11■■■■□ 3.05
SYMPK-208ENST00000598059 ZNF644Q9H582 1327 aaPredicted RBP34.08■■■■□ 3.05
SYMPK-208ENST00000598059 FBXO41Q8TF61 875 aa34.07■■■■□ 3.04
SYMPK-208ENST00000598059 LOC105371045A0A1W2PR82 267 aa34.06■■■■□ 3.04
SYMPK-208ENST00000598059 SUPT6HQ7KZ85 1726 aaKnown RBP34.06■■■■□ 3.04
SYMPK-208ENST00000598059 UHRF1BP1Q6BDS2 1440 aa34.05■■■■□ 3.04
SYMPK-208ENST00000598059 CNTLNQ9NXG0 1405 aa34.05■■■■□ 3.04
SYMPK-208ENST00000598059 PLXNC1O60486 1568 aa34.03■■■■□ 3.04
SYMPK-208ENST00000598059 MBD5Q9P267 1494 aa34.02■■■■□ 3.04
SYMPK-208ENST00000598059 A2MP01023 1474 aa34.01■■■■□ 3.04
SYMPK-208ENST00000598059 NCOA2Q15596 1464 aa33.99■■■■□ 3.03
SYMPK-208ENST00000598059 MROH2AA6NES4 1674 aa33.96■■■■□ 3.03
SYMPK-208ENST00000598059 VPS8Q8N3P4 1428 aa33.96■■■■□ 3.03
SYMPK-208ENST00000598059 ADGBQ8N7X0 1667 aa33.95■■■■□ 3.03
SYMPK-208ENST00000598059 STRCQ7RTU9 1775 aa33.95■■■■□ 3.02
SYMPK-208ENST00000598059 ZMYM3Q14202 1370 aa33.92■■■■□ 3.02
SYMPK-208ENST00000598059 RTEL1-TNFRSF6BF6WH68 1400 aa33.91■■■■□ 3.02
SYMPK-208ENST00000598059 CAMSAP2Q08AD1 1489 aa33.88■■■■□ 3.01
SYMPK-208ENST00000598059 CLTCQ00610 1675 aaKnown RBP33.88■■■■□ 3.01
SYMPK-208ENST00000598059 NPATQ14207 1427 aa33.87■■■■□ 3.01
SYMPK-208ENST00000598059 GGT6Q6P531 493 aa33.87■■■■□ 3.01
SYMPK-208ENST00000598059 DMRT2Q9Y5R5 561 aa33.87■■■■□ 3.01
SYMPK-208ENST00000598059 LRRC9Q6ZRR7 1453 aa33.87■■■■□ 3.01
SYMPK-208ENST00000598059 CCDC141Q6ZP82 1450 aa33.86■■■■□ 3.01
SYMPK-208ENST00000598059 RSPH4AQ5TD94 716 aa33.83■■■■□ 3.01
SYMPK-208ENST00000598059 CERKQ8TCT0 537 aa33.82■■■■□ 3
SYMPK-208ENST00000598059 DHX29Q7Z478 1369 aaKnown RBP33.82■■■■□ 3
SYMPK-208ENST00000598059 PPP6R1Q9UPN7 881 aa33.81■■■■□ 3
SYMPK-208ENST00000598059 MAP3K1Q13233 1512 aa33.79■■■■□ 3
SYMPK-208ENST00000598059 ARHGEF5Q12774 1597 aa33.77■■■■□ 3
SYMPK-208ENST00000598059 KANK4Q5T7N3 995 aaPredicted RBP33.75■■■□□ 2.99
SYMPK-208ENST00000598059 PTPRKQ15262 1439 aa33.75■■■□□ 2.99
SYMPK-208ENST00000598059 PTPRTO14522 1441 aa33.74■■■□□ 2.99
SYMPK-208ENST00000598059 NCOA1Q15788 1441 aa33.73■■■□□ 2.99
SYMPK-208ENST00000598059 KIF3BO15066 747 aa33.7■■■□□ 2.99
SYMPK-208ENST00000598059 CAMSAP1Q5T5Y3 1602 aa33.69■■■□□ 2.98
SYMPK-208ENST00000598059 MYO3AQ8NEV4 1616 aa33.69■■■□□ 2.98
SYMPK-208ENST00000598059 TSPY4P0CV99 314 aa33.69■■■□□ 2.98
SYMPK-208ENST00000598059 TSPY10P0CW01 314 aa33.69■■■□□ 2.98
SYMPK-208ENST00000598059 ZNF142P52746 1687 aaPredicted RBP33.67■■■□□ 2.98
SYMPK-208ENST00000598059 MYOM3Q5VTT5 1437 aa33.63■■■□□ 2.97
SYMPK-208ENST00000598059 CEP170BQ9Y4F5 1589 aaPredicted RBP33.63■■■□□ 2.97
SYMPK-208ENST00000598059 MIA2Q96PC5 1412 aa33.62■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms