RNA–Protein interactions for RNA: ENST00000597370.5

TMEM143-206, Transcript of transmembrane protein 143, humanhuman

TSL 5

Gene TMEM143, Length 748 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-206ENST00000597370 CASKIN1Q8WXD9 1431 aa24.44■■□□□ 1.5
TMEM143-206ENST00000597370 CLIP1P30622 1438 aa24.41■■□□□ 1.5
TMEM143-206ENST00000597370 PCF11O94913 1555 aaKnown RBP24.41■■□□□ 1.5
TMEM143-206ENST00000597370 SIGLEC1Q9BZZ2 1709 aa24.39■■□□□ 1.5
TMEM143-206ENST00000597370 KDM5CP41229 1560 aa24.39■■□□□ 1.5
TMEM143-206ENST00000597370 SCAPERQ9BY12 1400 aa24.39■■□□□ 1.5
TMEM143-206ENST00000597370 YEATS2Q9ULM3 1422 aa24.37■■□□□ 1.49
TMEM143-206ENST00000597370 FYCO1Q9BQS8 1478 aa24.37■■□□□ 1.49
TMEM143-206ENST00000597370 CDC42BPBQ9Y5S2 1711 aa24.35■■□□□ 1.49
TMEM143-206ENST00000597370 ZNF518AQ6AHZ1 1483 aa24.35■■□□□ 1.49
TMEM143-206ENST00000597370 EFCAB2Q5VUJ9 269 aa24.35■■□□□ 1.49
TMEM143-206ENST00000597370 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
TMEM143-206ENST00000597370 RIMS1Q86UR5 1692 aaKnown RBP24.33■■□□□ 1.49
TMEM143-206ENST00000597370 LOC105371045A0A1W2PR82 267 aa24.32■■□□□ 1.48
TMEM143-206ENST00000597370 ARHGAP5Q13017 1502 aa24.31■■□□□ 1.48
TMEM143-206ENST00000597370 REREQ9P2R6 1566 aa24.31■■□□□ 1.48
TMEM143-206ENST00000597370 C9orf84Q5VXU9 1444 aa24.29■■□□□ 1.48
TMEM143-206ENST00000597370 ATP10AO60312 1499 aa24.29■■□□□ 1.48
TMEM143-206ENST00000597370 ARHGEF12Q9NZN5 1544 aa24.28■■□□□ 1.48
TMEM143-206ENST00000597370 ABCC1P33527 1531 aa24.27■■□□□ 1.48
TMEM143-206ENST00000597370 ATP1B4Q9UN42 357 aaPredicted RBP24.27■■□□□ 1.48
TMEM143-206ENST00000597370 ARID4BQ4LE39 1312 aaPredicted RBP24.27■■□□□ 1.48
TMEM143-206ENST00000597370 FER1L4A9Z1Z3 1794 aa24.26■■□□□ 1.47
TMEM143-206ENST00000597370 LMTK3Q96Q04 1460 aa24.26■■□□□ 1.47
TMEM143-206ENST00000597370 CDC42BPAQ5VT25 1732 aa24.26■■□□□ 1.47
TMEM143-206ENST00000597370 MLH3Q9UHC1 1453 aa24.25■■□□□ 1.47
TMEM143-206ENST00000597370 ITSN2Q9NZM3 1697 aa24.24■■□□□ 1.47
TMEM143-206ENST00000597370 DIP2CQ9Y2E4 1556 aa24.22■■□□□ 1.47
TMEM143-206ENST00000597370 AGLP35573 1532 aa24.18■■□□□ 1.46
TMEM143-206ENST00000597370 ABCA6Q8N139 1617 aa24.17■■□□□ 1.46
TMEM143-206ENST00000597370 KIDINS220Q9ULH0 1771 aa24.14■■□□□ 1.46
TMEM143-206ENST00000597370 AFAP1Q8N556 730 aa24.13■■□□□ 1.45
TMEM143-206ENST00000597370 SAMD9LQ8IVG5 1584 aa24.12■■□□□ 1.45
TMEM143-206ENST00000597370 CEP162Q5TB80 1403 aa24.12■■□□□ 1.45
TMEM143-206ENST00000597370 TRAPPC8Q9Y2L5 1435 aa24.12■■□□□ 1.45
TMEM143-206ENST00000597370 GPATCH8Q9UKJ3 1502 aaKnown RBP24.12■■□□□ 1.45
TMEM143-206ENST00000597370 ILDR1Q86SU0 546 aaPredicted RBP24.12■■□□□ 1.45
TMEM143-206ENST00000597370 PREX1Q8TCU6 1659 aa24.09■■□□□ 1.45
TMEM143-206ENST00000597370 KIAA1107Q9UPP5 1409 aa24.09■■□□□ 1.45
TMEM143-206ENST00000597370 PLEKHH2Q8IVE3 1493 aa24.07■■□□□ 1.44
TMEM143-206ENST00000597370 SETD1BQ9UPS6 1966 aaKnown RBP24.06■■□□□ 1.44
TMEM143-206ENST00000597370 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
TMEM143-206ENST00000597370 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
TMEM143-206ENST00000597370 INO80Q9ULG1 1556 aaPredicted RBP24.03■■□□□ 1.44
TMEM143-206ENST00000597370 PLXNC1O60486 1568 aa23.99■■□□□ 1.43
TMEM143-206ENST00000597370 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
TMEM143-206ENST00000597370 C3P01024 1663 aa23.99■■□□□ 1.43
TMEM143-206ENST00000597370 MLECQ14165 292 aa23.99■■□□□ 1.43
TMEM143-206ENST00000597370 MROH2AA6NES4 1674 aa23.99■■□□□ 1.43
TMEM143-206ENST00000597370 MTUS2Q5JR59 1369 aa23.98■■□□□ 1.43
TMEM143-206ENST00000597370 CNTLNQ9NXG0 1405 aa23.98■■□□□ 1.43
TMEM143-206ENST00000597370 ATP7AQ04656 1500 aa23.98■■□□□ 1.43
TMEM143-206ENST00000597370 CCNB3Q8WWL7 1395 aa23.96■■□□□ 1.43
TMEM143-206ENST00000597370 FBXO41Q8TF61 875 aa23.92■■□□□ 1.42
TMEM143-206ENST00000597370 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
TMEM143-206ENST00000597370 ADGBQ8N7X0 1667 aa23.91■■□□□ 1.42
TMEM143-206ENST00000597370 UHRF1BP1Q6BDS2 1440 aa23.91■■□□□ 1.42
TMEM143-206ENST00000597370 SPAG9O60271 1321 aaKnown RBP23.9■■□□□ 1.42
TMEM143-206ENST00000597370 MBD5Q9P267 1494 aa23.9■■□□□ 1.42
TMEM143-206ENST00000597370 HSPA2P54652 639 aa23.89■■□□□ 1.41
TMEM143-206ENST00000597370 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.41
TMEM143-206ENST00000597370 SUPT6HQ7KZ85 1726 aaKnown RBP23.89■■□□□ 1.41
TMEM143-206ENST00000597370 STRCQ7RTU9 1775 aa23.88■■□□□ 1.41
TMEM143-206ENST00000597370 RTEL1-TNFRSF6BF6WH68 1400 aa23.87■■□□□ 1.41
TMEM143-206ENST00000597370 A2MP01023 1474 aa23.87■■□□□ 1.41
TMEM143-206ENST00000597370 NPATQ14207 1427 aa23.86■■□□□ 1.41
TMEM143-206ENST00000597370 CEBPAP49715 358 aaPredicted RBP23.85■■□□□ 1.41
TMEM143-206ENST00000597370 HNRNPMP52272 730 aaKnown RBP eCLIP23.85■■□□□ 1.41
TMEM143-206ENST00000597370 ZNF777Q9ULD5 760 aaPredicted RBP23.85■■□□□ 1.41
TMEM143-206ENST00000597370 NCOA2Q15596 1464 aa23.82■■□□□ 1.4
TMEM143-206ENST00000597370 MAP3K1Q13233 1512 aa23.82■■□□□ 1.4
TMEM143-206ENST00000597370 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
TMEM143-206ENST00000597370 FAM135AQ9P2D6 1515 aa23.8■■□□□ 1.4
TMEM143-206ENST00000597370 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
TMEM143-206ENST00000597370 ESF1Q9H501 851 aaKnown RBP23.79■■□□□ 1.4
TMEM143-206ENST00000597370 PPP6R1Q9UPN7 881 aa23.79■■□□□ 1.4
TMEM143-206ENST00000597370 ZNF142P52746 1687 aaPredicted RBP23.79■■□□□ 1.4
TMEM143-206ENST00000597370 CCDC141Q6ZP82 1450 aa23.78■■□□□ 1.4
TMEM143-206ENST00000597370 ARHGEF5Q12774 1597 aa23.78■■□□□ 1.4
TMEM143-206ENST00000597370 PTPRTO14522 1441 aa23.77■■□□□ 1.4
TMEM143-206ENST00000597370 CLTCQ00610 1675 aaKnown RBP23.77■■□□□ 1.4
TMEM143-206ENST00000597370 DMRT2Q9Y5R5 561 aa23.77■■□□□ 1.4
TMEM143-206ENST00000597370 CAMSAP2Q08AD1 1489 aa23.76■■□□□ 1.39
TMEM143-206ENST00000597370 RSPH4AQ5TD94 716 aa23.76■■□□□ 1.39
TMEM143-206ENST00000597370 ZMYM3Q14202 1370 aa23.75■■□□□ 1.39
TMEM143-206ENST00000597370 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
TMEM143-206ENST00000597370 ZNF644Q9H582 1327 aaPredicted RBP23.74■■□□□ 1.39
TMEM143-206ENST00000597370 NCOA1Q15788 1441 aa23.73■■□□□ 1.39
TMEM143-206ENST00000597370 DHX29Q7Z478 1369 aaKnown RBP23.72■■□□□ 1.39
TMEM143-206ENST00000597370 MYO3AQ8NEV4 1616 aa23.72■■□□□ 1.39
TMEM143-206ENST00000597370 MAST1Q9Y2H9 1570 aa23.69■■□□□ 1.38
TMEM143-206ENST00000597370 PTPRKQ15262 1439 aa23.69■■□□□ 1.38
TMEM143-206ENST00000597370 CERKQ8TCT0 537 aa23.68■■□□□ 1.38
TMEM143-206ENST00000597370 PLA2R1Q13018 1463 aa23.68■■□□□ 1.38
TMEM143-206ENST00000597370 CEP170BQ9Y4F5 1589 aaPredicted RBP23.65■■□□□ 1.38
TMEM143-206ENST00000597370 MIA2Q96PC5 1412 aa23.65■■□□□ 1.38
TMEM143-206ENST00000597370 CAMSAP1Q5T5Y3 1602 aa23.64■■□□□ 1.38
TMEM143-206ENST00000597370 KDM5DQ9BY66 1539 aa23.64■■□□□ 1.37
TMEM143-206ENST00000597370 IQSEC2Q5JU85 1478 aa23.62■■□□□ 1.37
TMEM143-206ENST00000597370 LTBP4Q8N2S1 1624 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms