RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 RAPGEF3O95398 923 aa17.76■□□□□ 0.43
PDE4C-210ENST00000597297 NEO1Q92859 1461 aa17.76■□□□□ 0.43
PDE4C-210ENST00000597297 FANCAO15360 1455 aa17.75■□□□□ 0.43
PDE4C-210ENST00000597297 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
PDE4C-210ENST00000597297 AKNAQ7Z591 1439 aa17.75■□□□□ 0.43
PDE4C-210ENST00000597297 ARAP3Q8WWN8 1544 aa17.75■□□□□ 0.43
PDE4C-210ENST00000597297 NCOA2Q15596 1464 aa17.74■□□□□ 0.43
PDE4C-210ENST00000597297 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
PDE4C-210ENST00000597297 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
PDE4C-210ENST00000597297 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
PDE4C-210ENST00000597297 FGD6Q6ZV73 1430 aa17.69■□□□□ 0.42
PDE4C-210ENST00000597297 ARHGAP5Q13017 1502 aa17.68■□□□□ 0.42
PDE4C-210ENST00000597297 GPATCH8Q9UKJ3 1502 aaKnown RBP17.68■□□□□ 0.42
PDE4C-210ENST00000597297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDE4C-210ENST00000597297 MYOM3Q5VTT5 1437 aa17.67■□□□□ 0.42
PDE4C-210ENST00000597297 SCAPERQ9BY12 1400 aa17.67■□□□□ 0.42
PDE4C-210ENST00000597297 ZNF777Q9ULD5 760 aaPredicted RBP17.66■□□□□ 0.42
PDE4C-210ENST00000597297 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
PDE4C-210ENST00000597297 DENND4BO75064 1496 aaPredicted RBP17.66■□□□□ 0.42
PDE4C-210ENST00000597297 ADGRL1O94910 1474 aa17.65■□□□□ 0.42
PDE4C-210ENST00000597297 CFAP74Q9C0B2 1584 aa17.65■□□□□ 0.42
PDE4C-210ENST00000597297 CFDP1Q9UEE9 299 aaPredicted RBP17.65■□□□□ 0.42
PDE4C-210ENST00000597297 PREX2Q70Z35 1606 aa17.64■□□□□ 0.41
PDE4C-210ENST00000597297 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
PDE4C-210ENST00000597297 AFAP1Q8N556 730 aa17.63■□□□□ 0.41
PDE4C-210ENST00000597297 PTPN23Q9H3S7 1636 aa17.63■□□□□ 0.41
PDE4C-210ENST00000597297 FRMPD1Q5SYB0 1578 aa17.62■□□□□ 0.41
PDE4C-210ENST00000597297 RICTORQ6R327 1708 aa17.62■□□□□ 0.41
PDE4C-210ENST00000597297 ZNF644Q9H582 1327 aaPredicted RBP17.6■□□□□ 0.41
PDE4C-210ENST00000597297 ITGAEP38570 1179 aa17.6■□□□□ 0.41
PDE4C-210ENST00000597297 HNRNPMP52272 730 aaKnown RBP eCLIP17.6■□□□□ 0.41
PDE4C-210ENST00000597297 ARHGEF12Q9NZN5 1544 aa17.6■□□□□ 0.41
PDE4C-210ENST00000597297 TCOF1Q13428 1488 aaKnown RBP17.58■□□□□ 0.41
PDE4C-210ENST00000597297 POGZQ7Z3K3 1410 aa17.57■□□□□ 0.4
PDE4C-210ENST00000597297 MIA2Q96PC5 1412 aa17.56■□□□□ 0.4
PDE4C-210ENST00000597297 TRAPPC8Q9Y2L5 1435 aa17.56■□□□□ 0.4
PDE4C-210ENST00000597297 KDM4FA0A1W2PPD8 638 aa17.56■□□□□ 0.4
PDE4C-210ENST00000597297 SAMD9LQ8IVG5 1584 aa17.56■□□□□ 0.4
PDE4C-210ENST00000597297 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
PDE4C-210ENST00000597297 ABCC1P33527 1531 aa17.54■□□□□ 0.4
PDE4C-210ENST00000597297 YEATS2Q9ULM3 1422 aa17.54■□□□□ 0.4
PDE4C-210ENST00000597297 MYT1LQ9UL68 1186 aa17.53■□□□□ 0.4
PDE4C-210ENST00000597297 ZNF518AQ6AHZ1 1483 aa17.52■□□□□ 0.4
PDE4C-210ENST00000597297 ZMYM4Q5VZL5 1548 aa17.52■□□□□ 0.39
PDE4C-210ENST00000597297 SETD5Q9C0A6 1442 aa17.51■□□□□ 0.39
PDE4C-210ENST00000597297 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
PDE4C-210ENST00000597297 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
PDE4C-210ENST00000597297 RAB3GAP2Q9H2M9 1393 aa17.5■□□□□ 0.39
PDE4C-210ENST00000597297 SYCP2Q9BX26 1530 aa17.5■□□□□ 0.39
PDE4C-210ENST00000597297 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
PDE4C-210ENST00000597297 KDM5CP41229 1560 aa17.48■□□□□ 0.39
PDE4C-210ENST00000597297 PLEKHH2Q8IVE3 1493 aa17.48■□□□□ 0.39
PDE4C-210ENST00000597297 PTPRKQ15262 1439 aa17.48■□□□□ 0.39
PDE4C-210ENST00000597297 ZFYVE16Q7Z3T8 1539 aa17.48■□□□□ 0.39
PDE4C-210ENST00000597297 MBD5Q9P267 1494 aa17.47■□□□□ 0.39
PDE4C-210ENST00000597297 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
PDE4C-210ENST00000597297 MLH3Q9UHC1 1453 aa17.47■□□□□ 0.39
PDE4C-210ENST00000597297 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.39
PDE4C-210ENST00000597297 AEBP2Q6ZN18 517 aaPredicted RBP17.45■□□□□ 0.38
PDE4C-210ENST00000597297 ATP10AO60312 1499 aa17.45■□□□□ 0.38
PDE4C-210ENST00000597297 ARHGEF40Q8TER5 1519 aa17.45■□□□□ 0.38
PDE4C-210ENST00000597297 CAMSAP2Q08AD1 1489 aa17.45■□□□□ 0.38
PDE4C-210ENST00000597297 RSPH4AQ5TD94 716 aa17.44■□□□□ 0.38
PDE4C-210ENST00000597297 DNMT1P26358 1616 aaKnown RBP17.44■□□□□ 0.38
PDE4C-210ENST00000597297 CLSPNQ9HAW4 1339 aa17.43■□□□□ 0.38
PDE4C-210ENST00000597297 KIDINS220Q9ULH0 1771 aa17.43■□□□□ 0.38
PDE4C-210ENST00000597297 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
PDE4C-210ENST00000597297 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
PDE4C-210ENST00000597297 HECW2Q9P2P5 1572 aa17.43■□□□□ 0.38
PDE4C-210ENST00000597297 SIGLEC1Q9BZZ2 1709 aa17.42■□□□□ 0.38
PDE4C-210ENST00000597297 MLECQ14165 292 aa17.4■□□□□ 0.38
PDE4C-210ENST00000597297 TSPY4P0CV99 314 aa17.39■□□□□ 0.37
PDE4C-210ENST00000597297 TSPY10P0CW01 314 aa17.39■□□□□ 0.37
PDE4C-210ENST00000597297 DIP2CQ9Y2E4 1556 aa17.39■□□□□ 0.37
PDE4C-210ENST00000597297 ABCA6Q8N139 1617 aa17.38■□□□□ 0.37
PDE4C-210ENST00000597297 DAPK1P53355 1430 aa17.38■□□□□ 0.37
PDE4C-210ENST00000597297 NAIPQ13075 1403 aa17.38■□□□□ 0.37
PDE4C-210ENST00000597297 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
PDE4C-210ENST00000597297 CROCC2H7BZ55 1655 aa17.37■□□□□ 0.37
PDE4C-210ENST00000597297 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
PDE4C-210ENST00000597297 ATP7AQ04656 1500 aa17.36■□□□□ 0.37
PDE4C-210ENST00000597297 ABCC5O15440 1437 aa17.35■□□□□ 0.37
PDE4C-210ENST00000597297 ARHGEF5Q12774 1597 aa17.35■□□□□ 0.37
PDE4C-210ENST00000597297 BCORL1Q5H9F3 1711 aa17.35■□□□□ 0.37
PDE4C-210ENST00000597297 RTEL1-TNFRSF6BF6WH68 1400 aa17.35■□□□□ 0.37
PDE4C-210ENST00000597297 ADGBQ8N7X0 1667 aa17.35■□□□□ 0.37
PDE4C-210ENST00000597297 ADAMTSL3P82987 1691 aa17.33■□□□□ 0.37
PDE4C-210ENST00000597297 INO80Q9ULG1 1556 aaPredicted RBP17.33■□□□□ 0.37
PDE4C-210ENST00000597297 ROCK1Q13464 1354 aa17.32■□□□□ 0.36
PDE4C-210ENST00000597297 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
PDE4C-210ENST00000597297 REREQ9P2R6 1566 aa17.31■□□□□ 0.36
PDE4C-210ENST00000597297 A2MP01023 1474 aa17.3■□□□□ 0.36
PDE4C-210ENST00000597297 DHX29Q7Z478 1369 aaKnown RBP17.29■□□□□ 0.36
PDE4C-210ENST00000597297 AGLP35573 1532 aa17.29■□□□□ 0.36
PDE4C-210ENST00000597297 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
PDE4C-210ENST00000597297 MADDQ8WXG6 1647 aa17.28■□□□□ 0.36
PDE4C-210ENST00000597297 ADGRL2O95490 1459 aa17.26■□□□□ 0.35
PDE4C-210ENST00000597297 SHANK2Q9UPX8 1470 aa17.26■□□□□ 0.35
PDE4C-210ENST00000597297 GGT6Q6P531 493 aa17.26■□□□□ 0.35
PDE4C-210ENST00000597297 PLPPR3Q6T4P5 718 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms