RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 AKNAQ7Z591 1439 aa17.56■□□□□ 0.4
SH2D3A-206ENST00000597254 TTC37Q6PGP7 1564 aa17.56■□□□□ 0.4
SH2D3A-206ENST00000597254 CFAP74Q9C0B2 1584 aa17.56■□□□□ 0.4
SH2D3A-206ENST00000597254 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
SH2D3A-206ENST00000597254 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
SH2D3A-206ENST00000597254 ARID4BQ4LE39 1312 aaPredicted RBP17.52■□□□□ 0.4
SH2D3A-206ENST00000597254 KIF14Q15058 1648 aa17.51■□□□□ 0.39
SH2D3A-206ENST00000597254 PLCH2O75038 1416 aa17.5■□□□□ 0.39
SH2D3A-206ENST00000597254 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
SH2D3A-206ENST00000597254 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
SH2D3A-206ENST00000597254 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
SH2D3A-206ENST00000597254 RICTORQ6R327 1708 aa17.49■□□□□ 0.39
SH2D3A-206ENST00000597254 MYOM3Q5VTT5 1437 aa17.48■□□□□ 0.39
SH2D3A-206ENST00000597254 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
SH2D3A-206ENST00000597254 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
SH2D3A-206ENST00000597254 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
SH2D3A-206ENST00000597254 ARHGEF40Q8TER5 1519 aa17.46■□□□□ 0.39
SH2D3A-206ENST00000597254 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
SH2D3A-206ENST00000597254 HECW2Q9P2P5 1572 aa17.45■□□□□ 0.38
SH2D3A-206ENST00000597254 FGD6Q6ZV73 1430 aa17.44■□□□□ 0.38
SH2D3A-206ENST00000597254 ZMYM4Q5VZL5 1548 aa17.43■□□□□ 0.38
SH2D3A-206ENST00000597254 ADAMTSL3P82987 1691 aa17.43■□□□□ 0.38
SH2D3A-206ENST00000597254 MIA2Q96PC5 1412 aa17.43■□□□□ 0.38
SH2D3A-206ENST00000597254 MAGI2Q86UL8 1455 aa17.43■□□□□ 0.38
SH2D3A-206ENST00000597254 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
SH2D3A-206ENST00000597254 BCORL1Q5H9F3 1711 aa17.42■□□□□ 0.38
SH2D3A-206ENST00000597254 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
SH2D3A-206ENST00000597254 FAM50AQ14320 339 aaKnown RBP17.42■□□□□ 0.38
SH2D3A-206ENST00000597254 CFDP1Q9UEE9 299 aaPredicted RBP17.42■□□□□ 0.38
SH2D3A-206ENST00000597254 PTPRMP28827 1452 aa17.41■□□□□ 0.38
SH2D3A-206ENST00000597254 ARHGAP5Q13017 1502 aa17.41■□□□□ 0.38
SH2D3A-206ENST00000597254 YEATS2Q9ULM3 1422 aa17.4■□□□□ 0.38
SH2D3A-206ENST00000597254 CDC42BPAQ5VT25 1732 aa17.4■□□□□ 0.38
SH2D3A-206ENST00000597254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
SH2D3A-206ENST00000597254 ITSN2Q9NZM3 1697 aa17.39■□□□□ 0.37
SH2D3A-206ENST00000597254 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
SH2D3A-206ENST00000597254 MADDQ8WXG6 1647 aa17.37■□□□□ 0.37
SH2D3A-206ENST00000597254 ZNF777Q9ULD5 760 aaPredicted RBP17.37■□□□□ 0.37
SH2D3A-206ENST00000597254 TCOF1Q13428 1488 aaKnown RBP17.37■□□□□ 0.37
SH2D3A-206ENST00000597254 CDC42BPBQ9Y5S2 1711 aa17.36■□□□□ 0.37
SH2D3A-206ENST00000597254 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
SH2D3A-206ENST00000597254 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
SH2D3A-206ENST00000597254 ZNF518AQ6AHZ1 1483 aa17.35■□□□□ 0.37
SH2D3A-206ENST00000597254 MLECQ14165 292 aa17.34■□□□□ 0.37
SH2D3A-206ENST00000597254 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
SH2D3A-206ENST00000597254 AFAP1Q8N556 730 aa17.34■□□□□ 0.37
SH2D3A-206ENST00000597254 ATP10AO60312 1499 aa17.33■□□□□ 0.37
SH2D3A-206ENST00000597254 ITGAEP38570 1179 aa17.33■□□□□ 0.36
SH2D3A-206ENST00000597254 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
SH2D3A-206ENST00000597254 C9orf84Q5VXU9 1444 aa17.31■□□□□ 0.36
SH2D3A-206ENST00000597254 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
SH2D3A-206ENST00000597254 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
SH2D3A-206ENST00000597254 KDM5CP41229 1560 aa17.28■□□□□ 0.36
SH2D3A-206ENST00000597254 SIGLEC1Q9BZZ2 1709 aa17.28■□□□□ 0.36
SH2D3A-206ENST00000597254 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.36
SH2D3A-206ENST00000597254 SAMD9LQ8IVG5 1584 aa17.27■□□□□ 0.35
SH2D3A-206ENST00000597254 ABCC1P33527 1531 aa17.26■□□□□ 0.35
SH2D3A-206ENST00000597254 PTPRKQ15262 1439 aa17.25■□□□□ 0.35
SH2D3A-206ENST00000597254 TRAPPC8Q9Y2L5 1435 aa17.25■□□□□ 0.35
SH2D3A-206ENST00000597254 RSPH4AQ5TD94 716 aa17.25■□□□□ 0.35
SH2D3A-206ENST00000597254 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
SH2D3A-206ENST00000597254 MLH3Q9UHC1 1453 aa17.24■□□□□ 0.35
SH2D3A-206ENST00000597254 ABCC5O15440 1437 aa17.24■□□□□ 0.35
SH2D3A-206ENST00000597254 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
SH2D3A-206ENST00000597254 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
SH2D3A-206ENST00000597254 DAPK1P53355 1430 aa17.23■□□□□ 0.35
SH2D3A-206ENST00000597254 KIAA1107Q9UPP5 1409 aa17.23■□□□□ 0.35
SH2D3A-206ENST00000597254 MBD5Q9P267 1494 aa17.23■□□□□ 0.35
SH2D3A-206ENST00000597254 DNMT1P26358 1616 aaKnown RBP17.22■□□□□ 0.35
SH2D3A-206ENST00000597254 DIP2CQ9Y2E4 1556 aa17.22■□□□□ 0.35
SH2D3A-206ENST00000597254 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
SH2D3A-206ENST00000597254 ILDR1Q86SU0 546 aaPredicted RBP17.21■□□□□ 0.35
SH2D3A-206ENST00000597254 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
SH2D3A-206ENST00000597254 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
SH2D3A-206ENST00000597254 ABCA6Q8N139 1617 aa17.19■□□□□ 0.34
SH2D3A-206ENST00000597254 TSPY4P0CV99 314 aa17.19■□□□□ 0.34
SH2D3A-206ENST00000597254 TSPY10P0CW01 314 aa17.19■□□□□ 0.34
SH2D3A-206ENST00000597254 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
SH2D3A-206ENST00000597254 SYCP2Q9BX26 1530 aa17.18■□□□□ 0.34
SH2D3A-206ENST00000597254 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
SH2D3A-206ENST00000597254 SPAG9O60271 1321 aaKnown RBP17.18■□□□□ 0.34
SH2D3A-206ENST00000597254 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
SH2D3A-206ENST00000597254 HSPA2P54652 639 aa17.16■□□□□ 0.34
SH2D3A-206ENST00000597254 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
SH2D3A-206ENST00000597254 KIDINS220Q9ULH0 1771 aa17.15■□□□□ 0.34
SH2D3A-206ENST00000597254 RRP7BPQ9NSQ0 103 aa17.15■□□□□ 0.34
SH2D3A-206ENST00000597254 AGLP35573 1532 aa17.15■□□□□ 0.34
SH2D3A-206ENST00000597254 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
SH2D3A-206ENST00000597254 CROCC2H7BZ55 1655 aa17.13■□□□□ 0.33
SH2D3A-206ENST00000597254 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
SH2D3A-206ENST00000597254 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
SH2D3A-206ENST00000597254 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
SH2D3A-206ENST00000597254 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
SH2D3A-206ENST00000597254 ANKRD30AQ9BXX3 1397 aa17.1■□□□□ 0.33
SH2D3A-206ENST00000597254 HFM1A2PYH4 1435 aa17.1■□□□□ 0.33
SH2D3A-206ENST00000597254 NAIPQ13075 1403 aa17.1■□□□□ 0.33
SH2D3A-206ENST00000597254 ADGRL2O95490 1459 aa17.1■□□□□ 0.33
SH2D3A-206ENST00000597254 ATP7AQ04656 1500 aa17.1■□□□□ 0.33
SH2D3A-206ENST00000597254 MAST1Q9Y2H9 1570 aa17.09■□□□□ 0.33
SH2D3A-206ENST00000597254 ADGBQ8N7X0 1667 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms