RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 POGZQ7Z3K3 1410 aa28.95■■■□□ 2.23
CHMP2A-203ENST00000597209 ADAMTSL3P82987 1691 aa28.93■■■□□ 2.22
CHMP2A-203ENST00000597209 ARHGAP5Q13017 1502 aa28.91■■■□□ 2.22
CHMP2A-203ENST00000597209 ZFYVE16Q7Z3T8 1539 aa28.9■■■□□ 2.22
CHMP2A-203ENST00000597209 BCORL1Q5H9F3 1711 aa28.89■■■□□ 2.22
CHMP2A-203ENST00000597209 CDC42BPBQ9Y5S2 1711 aa28.88■■■□□ 2.21
CHMP2A-203ENST00000597209 ARID4BQ4LE39 1312 aaPredicted RBP28.87■■■□□ 2.21
CHMP2A-203ENST00000597209 PREX2Q70Z35 1606 aa28.87■■■□□ 2.21
CHMP2A-203ENST00000597209 CEP162Q5TB80 1403 aa28.86■■■□□ 2.21
CHMP2A-203ENST00000597209 YEATS2Q9ULM3 1422 aa28.86■■■□□ 2.21
CHMP2A-203ENST00000597209 ZNF518AQ6AHZ1 1483 aa28.84■■■□□ 2.21
CHMP2A-203ENST00000597209 PTPRMP28827 1452 aa28.8■■■□□ 2.2
CHMP2A-203ENST00000597209 KDM5CP41229 1560 aa28.79■■■□□ 2.2
CHMP2A-203ENST00000597209 CDC42BPAQ5VT25 1732 aa28.79■■■□□ 2.2
CHMP2A-203ENST00000597209 ATP10AO60312 1499 aa28.78■■■□□ 2.2
CHMP2A-203ENST00000597209 MADDQ8WXG6 1647 aa28.76■■■□□ 2.2
CHMP2A-203ENST00000597209 ABCC1P33527 1531 aa28.76■■■□□ 2.19
CHMP2A-203ENST00000597209 AFAP1Q8N556 730 aa28.76■■■□□ 2.19
CHMP2A-203ENST00000597209 HECW2Q9P2P5 1572 aa28.75■■■□□ 2.19
CHMP2A-203ENST00000597209 SIGLEC1Q9BZZ2 1709 aa28.75■■■□□ 2.19
CHMP2A-203ENST00000597209 GPATCH8Q9UKJ3 1502 aaKnown RBP28.74■■■□□ 2.19
CHMP2A-203ENST00000597209 C9orf84Q5VXU9 1444 aa28.73■■■□□ 2.19
CHMP2A-203ENST00000597209 ARHGEF12Q9NZN5 1544 aa28.73■■■□□ 2.19
CHMP2A-203ENST00000597209 MTUS2Q5JR59 1369 aa28.73■■■□□ 2.19
CHMP2A-203ENST00000597209 MLH3Q9UHC1 1453 aa28.72■■■□□ 2.19
CHMP2A-203ENST00000597209 ITSN2Q9NZM3 1697 aa28.71■■■□□ 2.19
CHMP2A-203ENST00000597209 TRAPPC8Q9Y2L5 1435 aa28.69■■■□□ 2.18
CHMP2A-203ENST00000597209 LOC105371045A0A1W2PR82 267 aa28.69■■■□□ 2.18
CHMP2A-203ENST00000597209 EHBP1L1Q8N3D4 1523 aa28.66■■■□□ 2.18
CHMP2A-203ENST00000597209 RIMS1Q86UR5 1692 aaKnown RBP28.66■■■□□ 2.18
CHMP2A-203ENST00000597209 CCNB3Q8WWL7 1395 aa28.65■■■□□ 2.18
CHMP2A-203ENST00000597209 SAMD9LQ8IVG5 1584 aa28.65■■■□□ 2.18
CHMP2A-203ENST00000597209 REREQ9P2R6 1566 aa28.65■■■□□ 2.18
CHMP2A-203ENST00000597209 DIP2CQ9Y2E4 1556 aa28.64■■■□□ 2.18
CHMP2A-203ENST00000597209 CFDP1Q9UEE9 299 aaPredicted RBP28.62■■■□□ 2.17
CHMP2A-203ENST00000597209 MYT1LQ9UL68 1186 aa28.62■■■□□ 2.17
CHMP2A-203ENST00000597209 ZNF777Q9ULD5 760 aaPredicted RBP28.62■■■□□ 2.17
CHMP2A-203ENST00000597209 KIAA1107Q9UPP5 1409 aa28.61■■■□□ 2.17
CHMP2A-203ENST00000597209 PLEKHH2Q8IVE3 1493 aa28.61■■■□□ 2.17
CHMP2A-203ENST00000597209 MLECQ14165 292 aa28.6■■■□□ 2.17
CHMP2A-203ENST00000597209 ABCA6Q8N139 1617 aa28.59■■■□□ 2.17
CHMP2A-203ENST00000597209 VPS8Q8N3P4 1428 aa28.58■■■□□ 2.17
CHMP2A-203ENST00000597209 SYCP2Q9BX26 1530 aa28.58■■■□□ 2.17
CHMP2A-203ENST00000597209 FER1L4A9Z1Z3 1794 aa28.57■■■□□ 2.16
CHMP2A-203ENST00000597209 KIDINS220Q9ULH0 1771 aa28.57■■■□□ 2.16
CHMP2A-203ENST00000597209 TIAM1Q13009 1591 aa28.57■■■□□ 2.16
CHMP2A-203ENST00000597209 AGLP35573 1532 aa28.55■■■□□ 2.16
CHMP2A-203ENST00000597209 HNRNPMP52272 730 aaKnown RBP eCLIP28.55■■■□□ 2.16
CHMP2A-203ENST00000597209 SPAG9O60271 1321 aaKnown RBP28.5■■■□□ 2.15
CHMP2A-203ENST00000597209 SUPT6HQ7KZ85 1726 aaKnown RBP28.49■■■□□ 2.15
CHMP2A-203ENST00000597209 LMTK3Q96Q04 1460 aa28.48■■■□□ 2.15
CHMP2A-203ENST00000597209 NCOA2Q15596 1464 aa28.47■■■□□ 2.15
CHMP2A-203ENST00000597209 MAP3K1Q13233 1512 aa28.45■■■□□ 2.15
CHMP2A-203ENST00000597209 ATP7AQ04656 1500 aa28.44■■■□□ 2.14
CHMP2A-203ENST00000597209 MBD5Q9P267 1494 aa28.44■■■□□ 2.14
CHMP2A-203ENST00000597209 INO80Q9ULG1 1556 aaPredicted RBP28.44■■■□□ 2.14
CHMP2A-203ENST00000597209 ZNF644Q9H582 1327 aaPredicted RBP28.43■■■□□ 2.14
CHMP2A-203ENST00000597209 LRRC9Q6ZRR7 1453 aa28.43■■■□□ 2.14
CHMP2A-203ENST00000597209 PLPPR3Q6T4P5 718 aa28.41■■■□□ 2.14
CHMP2A-203ENST00000597209 RTEL1-TNFRSF6BF6WH68 1400 aa28.36■■■□□ 2.13
CHMP2A-203ENST00000597209 PLXNC1O60486 1568 aa28.36■■■□□ 2.13
CHMP2A-203ENST00000597209 A2MP01023 1474 aa28.35■■■□□ 2.13
CHMP2A-203ENST00000597209 CEBPAP49715 358 aaPredicted RBP28.35■■■□□ 2.13
CHMP2A-203ENST00000597209 RSPH4AQ5TD94 716 aa28.35■■■□□ 2.13
CHMP2A-203ENST00000597209 ESF1Q9H501 851 aaKnown RBP28.34■■■□□ 2.13
CHMP2A-203ENST00000597209 CNTLNQ9NXG0 1405 aa28.34■■■□□ 2.13
CHMP2A-203ENST00000597209 CAMSAP2Q08AD1 1489 aa28.34■■■□□ 2.13
CHMP2A-203ENST00000597209 ADGBQ8N7X0 1667 aa28.32■■■□□ 2.12
CHMP2A-203ENST00000597209 KANK4Q5T7N3 995 aaPredicted RBP28.31■■■□□ 2.12
CHMP2A-203ENST00000597209 PREX1Q8TCU6 1659 aa28.31■■■□□ 2.12
CHMP2A-203ENST00000597209 CCDC141Q6ZP82 1450 aa28.3■■■□□ 2.12
CHMP2A-203ENST00000597209 C3P01024 1663 aa28.29■■■□□ 2.12
CHMP2A-203ENST00000597209 SETD1BQ9UPS6 1966 aaKnown RBP28.28■■■□□ 2.12
CHMP2A-203ENST00000597209 HSPA2P54652 639 aa28.27■■■□□ 2.12
CHMP2A-203ENST00000597209 ARHGEF5Q12774 1597 aa28.27■■■□□ 2.12
CHMP2A-203ENST00000597209 MROH2AA6NES4 1674 aa28.25■■■□□ 2.11
CHMP2A-203ENST00000597209 PPP6R1Q9UPN7 881 aa28.23■■■□□ 2.11
CHMP2A-203ENST00000597209 MIA2Q96PC5 1412 aa28.23■■■□□ 2.11
CHMP2A-203ENST00000597209 DHX29Q7Z478 1369 aaKnown RBP28.23■■■□□ 2.11
CHMP2A-203ENST00000597209 UHRF1BP1Q6BDS2 1440 aa28.22■■■□□ 2.11
CHMP2A-203ENST00000597209 MYOM3Q5VTT5 1437 aa28.21■■■□□ 2.11
CHMP2A-203ENST00000597209 APLP2Q06481 763 aa28.21■■■□□ 2.11
CHMP2A-203ENST00000597209 ZMYM3Q14202 1370 aa28.19■■■□□ 2.1
CHMP2A-203ENST00000597209 TSPY4P0CV99 314 aa28.18■■■□□ 2.1
CHMP2A-203ENST00000597209 TSPY10P0CW01 314 aa28.18■■■□□ 2.1
CHMP2A-203ENST00000597209 GGT6Q6P531 493 aa28.17■■■□□ 2.1
CHMP2A-203ENST00000597209 NPATQ14207 1427 aa28.17■■■□□ 2.1
CHMP2A-203ENST00000597209 ILDR1Q86SU0 546 aaPredicted RBP28.16■■■□□ 2.1
CHMP2A-203ENST00000597209 CLTCQ00610 1675 aaKnown RBP28.14■■■□□ 2.1
CHMP2A-203ENST00000597209 MAST1Q9Y2H9 1570 aa28.13■■■□□ 2.09
CHMP2A-203ENST00000597209 FAM135AQ9P2D6 1515 aa28.08■■■□□ 2.09
CHMP2A-203ENST00000597209 KIF3BO15066 747 aa28.08■■■□□ 2.09
CHMP2A-203ENST00000597209 PTPRKQ15262 1439 aa28.06■■■□□ 2.08
CHMP2A-203ENST00000597209 STRCQ7RTU9 1775 aa28.05■■■□□ 2.08
CHMP2A-203ENST00000597209 DMRT2Q9Y5R5 561 aa28.05■■■□□ 2.08
CHMP2A-203ENST00000597209 PTPN23Q9H3S7 1636 aa28.01■■■□□ 2.07
CHMP2A-203ENST00000597209 KDM5DQ9BY66 1539 aa28■■■□□ 2.07
CHMP2A-203ENST00000597209 FGD6Q6ZV73 1430 aa27.99■■■□□ 2.07
CHMP2A-203ENST00000597209 TCOF1Q13428 1488 aaKnown RBP27.98■■■□□ 2.07
CHMP2A-203ENST00000597209 SHANK2Q9UPX8 1470 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms