RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
SNRPA-202ENST00000596860 CFAP74Q9C0B2 1584 aa13.46□□□□□ -0.25
SNRPA-202ENST00000596860 PLEKHH2Q8IVE3 1493 aa13.44□□□□□ -0.26
SNRPA-202ENST00000596860 PTPN23Q9H3S7 1636 aa13.44□□□□□ -0.26
SNRPA-202ENST00000596860 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
SNRPA-202ENST00000596860 CD109Q6YHK3 1445 aa13.43□□□□□ -0.26
SNRPA-202ENST00000596860 KIAA1107Q9UPP5 1409 aa13.42□□□□□ -0.26
SNRPA-202ENST00000596860 NEO1Q92859 1461 aa13.42□□□□□ -0.26
SNRPA-202ENST00000596860 ARHGAP5Q13017 1502 aa13.41□□□□□ -0.26
SNRPA-202ENST00000596860 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
SNRPA-202ENST00000596860 PPARGC1BQ86YN6 1023 aaKnown RBP13.41□□□□□ -0.26
SNRPA-202ENST00000596860 CFDP1Q9UEE9 299 aaPredicted RBP13.41□□□□□ -0.26
SNRPA-202ENST00000596860 TEX14Q8IWB6 1497 aa13.41□□□□□ -0.26
SNRPA-202ENST00000596860 FAM69CQ0P6D2 419 aa13.4□□□□□ -0.26
SNRPA-202ENST00000596860 RSPH4AQ5TD94 716 aa13.4□□□□□ -0.26
SNRPA-202ENST00000596860 EFCAB2Q5VUJ9 269 aa13.4□□□□□ -0.26
SNRPA-202ENST00000596860 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
SNRPA-202ENST00000596860 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
SNRPA-202ENST00000596860 FANCAO15360 1455 aa13.38□□□□□ -0.27
SNRPA-202ENST00000596860 CAMSAP2Q08AD1 1489 aa13.38□□□□□ -0.27
SNRPA-202ENST00000596860 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
SNRPA-202ENST00000596860 ABCC1P33527 1531 aa13.37□□□□□ -0.27
SNRPA-202ENST00000596860 DNMT1P26358 1616 aaKnown RBP13.36□□□□□ -0.27
SNRPA-202ENST00000596860 SHANK2Q9UPX8 1470 aa13.35□□□□□ -0.27
SNRPA-202ENST00000596860 AKNAQ7Z591 1439 aa13.34□□□□□ -0.27
SNRPA-202ENST00000596860 KDM6BO15054 1643 aa13.34□□□□□ -0.27
SNRPA-202ENST00000596860 MBD5Q9P267 1494 aa13.34□□□□□ -0.27
SNRPA-202ENST00000596860 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
SNRPA-202ENST00000596860 MAST1Q9Y2H9 1570 aa13.32□□□□□ -0.28
SNRPA-202ENST00000596860 TSPOAP1O95153 1857 aa13.32□□□□□ -0.28
SNRPA-202ENST00000596860 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
SNRPA-202ENST00000596860 CCDC141Q6ZP82 1450 aa13.32□□□□□ -0.28
SNRPA-202ENST00000596860 SYCP2Q9BX26 1530 aa13.31□□□□□ -0.28
SNRPA-202ENST00000596860 DAPK1P53355 1430 aa13.3□□□□□ -0.28
SNRPA-202ENST00000596860 ABCC5O15440 1437 aa13.3□□□□□ -0.28
SNRPA-202ENST00000596860 ADGBQ8N7X0 1667 aa13.29□□□□□ -0.28
SNRPA-202ENST00000596860 ROCK1Q13464 1354 aa13.29□□□□□ -0.28
SNRPA-202ENST00000596860 RTEL1-TNFRSF6BF6WH68 1400 aa13.29□□□□□ -0.28
SNRPA-202ENST00000596860 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
SNRPA-202ENST00000596860 ZNF518AQ6AHZ1 1483 aa13.29□□□□□ -0.28
SNRPA-202ENST00000596860 ARHGEF12Q9NZN5 1544 aa13.29□□□□□ -0.28
SNRPA-202ENST00000596860 KDM5CP41229 1560 aa13.28□□□□□ -0.28
SNRPA-202ENST00000596860 FAM50AQ14320 339 aaKnown RBP13.28□□□□□ -0.28
SNRPA-202ENST00000596860 POGZQ7Z3K3 1410 aa13.28□□□□□ -0.28
SNRPA-202ENST00000596860 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.29
SNRPA-202ENST00000596860 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
SNRPA-202ENST00000596860 SCAPERQ9BY12 1400 aa13.27□□□□□ -0.29
SNRPA-202ENST00000596860 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.29
SNRPA-202ENST00000596860 RICTORQ6R327 1708 aa13.27□□□□□ -0.29
SNRPA-202ENST00000596860 PLXNC1O60486 1568 aa13.26□□□□□ -0.29
SNRPA-202ENST00000596860 ZMYM4Q5VZL5 1548 aa13.26□□□□□ -0.29
SNRPA-202ENST00000596860 ACIN1Q9UKV3 1341 aaKnown RBP13.26□□□□□ -0.29
SNRPA-202ENST00000596860 MAGI2Q86UL8 1455 aa13.25□□□□□ -0.29
SNRPA-202ENST00000596860 MLH3Q9UHC1 1453 aa13.25□□□□□ -0.29
SNRPA-202ENST00000596860 TSPY4P0CV99 314 aa13.25□□□□□ -0.29
SNRPA-202ENST00000596860 TSPY10P0CW01 314 aa13.25□□□□□ -0.29
SNRPA-202ENST00000596860 C9orf84Q5VXU9 1444 aa13.24□□□□□ -0.29
SNRPA-202ENST00000596860 INO80Q9ULG1 1556 aaPredicted RBP13.24□□□□□ -0.29
SNRPA-202ENST00000596860 PTPRKQ15262 1439 aa13.23□□□□□ -0.29
SNRPA-202ENST00000596860 TRAPPC8Q9Y2L5 1435 aa13.23□□□□□ -0.29
SNRPA-202ENST00000596860 HNRNPMP52272 730 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNRPA-202ENST00000596860 GCC2Q8IWJ2 1684 aa13.23□□□□□ -0.29
SNRPA-202ENST00000596860 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
SNRPA-202ENST00000596860 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
SNRPA-202ENST00000596860 HECW2Q9P2P5 1572 aa13.22□□□□□ -0.29
SNRPA-202ENST00000596860 ZFYVE16Q7Z3T8 1539 aa13.22□□□□□ -0.29
SNRPA-202ENST00000596860 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
SNRPA-202ENST00000596860 FRMPD1Q5SYB0 1578 aa13.21□□□□□ -0.29
SNRPA-202ENST00000596860 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
SNRPA-202ENST00000596860 HRCP23327 699 aa13.21□□□□□ -0.29
SNRPA-202ENST00000596860 KIDINS220Q9ULH0 1771 aa13.2□□□□□ -0.3
SNRPA-202ENST00000596860 ATP7AQ04656 1500 aa13.2□□□□□ -0.3
SNRPA-202ENST00000596860 SPAG9O60271 1321 aaKnown RBP13.19□□□□□ -0.3
SNRPA-202ENST00000596860 PCGF6Q9BYE7 350 aa13.18□□□□□ -0.3
SNRPA-202ENST00000596860 NAIPQ13075 1403 aa13.18□□□□□ -0.3
SNRPA-202ENST00000596860 REREQ9P2R6 1566 aa13.18□□□□□ -0.3
SNRPA-202ENST00000596860 DUOX2Q9NRD8 1548 aa13.18□□□□□ -0.3
SNRPA-202ENST00000596860 AFAP1Q8N556 730 aa13.17□□□□□ -0.3
SNRPA-202ENST00000596860 SETD5Q9C0A6 1442 aa13.16□□□□□ -0.3
SNRPA-202ENST00000596860 EIF2AK4Q9P2K8 1649 aaKnown RBP13.16□□□□□ -0.3
SNRPA-202ENST00000596860 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
SNRPA-202ENST00000596860 ERBINQ96RT1 1412 aa13.15□□□□□ -0.3
SNRPA-202ENST00000596860 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
SNRPA-202ENST00000596860 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
SNRPA-202ENST00000596860 ITGAEP38570 1179 aa13.14□□□□□ -0.31
SNRPA-202ENST00000596860 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
SNRPA-202ENST00000596860 DIP2CQ9Y2E4 1556 aa13.13□□□□□ -0.31
SNRPA-202ENST00000596860 ANKRD50Q9ULJ7 1429 aa13.13□□□□□ -0.31
SNRPA-202ENST00000596860 RAPGEF3O95398 923 aa13.12□□□□□ -0.31
SNRPA-202ENST00000596860 ABCA6Q8N139 1617 aa13.12□□□□□ -0.31
SNRPA-202ENST00000596860 DHX29Q7Z478 1369 aaKnown RBP13.11□□□□□ -0.31
SNRPA-202ENST00000596860 CHIC2Q9UKJ5 165 aa13.11□□□□□ -0.31
SNRPA-202ENST00000596860 A2MP01023 1474 aa13.1□□□□□ -0.31
SNRPA-202ENST00000596860 AGLP35573 1532 aa13.1□□□□□ -0.31
SNRPA-202ENST00000596860 ATP10AO60312 1499 aa13.1□□□□□ -0.31
SNRPA-202ENST00000596860 DEPDC5O75140 1603 aa13.09□□□□□ -0.31
SNRPA-202ENST00000596860 FAM135AQ9P2D6 1515 aa13.08□□□□□ -0.31
SNRPA-202ENST00000596860 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.31
SNRPA-202ENST00000596860 UNC13BO14795 1591 aa13.08□□□□□ -0.32
SNRPA-202ENST00000596860 RRP7BPQ9NSQ0 103 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms