RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 KANK4Q5T7N3 995 aaPredicted RBP27■■□□□ 1.91
SMG9-204ENST00000596714 NCOA2Q15596 1464 aa26.99■■□□□ 1.91
SMG9-204ENST00000596714 AKNAQ7Z591 1439 aa26.99■■□□□ 1.91
SMG9-204ENST00000596714 CDC42BPAQ5VT25 1732 aa26.98■■□□□ 1.91
SMG9-204ENST00000596714 CDC42BPBQ9Y5S2 1711 aa26.96■■□□□ 1.91
SMG9-204ENST00000596714 GPATCH8Q9UKJ3 1502 aaKnown RBP26.96■■□□□ 1.91
SMG9-204ENST00000596714 ITSN2Q9NZM3 1697 aa26.95■■□□□ 1.91
SMG9-204ENST00000596714 CFDP1Q9UEE9 299 aaPredicted RBP26.94■■□□□ 1.9
SMG9-204ENST00000596714 ADGRL1O94910 1474 aa26.93■■□□□ 1.9
SMG9-204ENST00000596714 COL17A1Q9UMD9 1497 aaPredicted RBP26.92■■□□□ 1.9
SMG9-204ENST00000596714 DENND4BO75064 1496 aaPredicted RBP26.9■■□□□ 1.9
SMG9-204ENST00000596714 ZNF777Q9ULD5 760 aaPredicted RBP26.89■■□□□ 1.9
SMG9-204ENST00000596714 SCAPERQ9BY12 1400 aa26.87■■□□□ 1.89
SMG9-204ENST00000596714 RAPGEF3O95398 923 aa26.84■■□□□ 1.89
SMG9-204ENST00000596714 PLEKHH2Q8IVE3 1493 aa26.84■■□□□ 1.89
SMG9-204ENST00000596714 MYOM3Q5VTT5 1437 aa26.82■■□□□ 1.88
SMG9-204ENST00000596714 ABCC1P33527 1531 aa26.81■■□□□ 1.88
SMG9-204ENST00000596714 POGZQ7Z3K3 1410 aa26.81■■□□□ 1.88
SMG9-204ENST00000596714 SAMD9LQ8IVG5 1584 aa26.8■■□□□ 1.88
SMG9-204ENST00000596714 ZNF518AQ6AHZ1 1483 aa26.79■■□□□ 1.88
SMG9-204ENST00000596714 RICTORQ6R327 1708 aa26.79■■□□□ 1.88
SMG9-204ENST00000596714 MIA2Q96PC5 1412 aa26.77■■□□□ 1.88
SMG9-204ENST00000596714 KIAA1107Q9UPP5 1409 aa26.77■■□□□ 1.88
SMG9-204ENST00000596714 FRMPD1Q5SYB0 1578 aa26.76■■□□□ 1.87
SMG9-204ENST00000596714 SYCP2Q9BX26 1530 aa26.75■■□□□ 1.87
SMG9-204ENST00000596714 CAMSAP2Q08AD1 1489 aa26.73■■□□□ 1.87
SMG9-204ENST00000596714 ZMYM4Q5VZL5 1548 aa26.72■■□□□ 1.87
SMG9-204ENST00000596714 ZNF644Q9H582 1327 aaPredicted RBP26.71■■□□□ 1.87
SMG9-204ENST00000596714 ARHGEF12Q9NZN5 1544 aa26.71■■□□□ 1.87
SMG9-204ENST00000596714 MAGI2Q86UL8 1455 aa26.71■■□□□ 1.87
SMG9-204ENST00000596714 HNRNPMP52272 730 aaKnown RBP eCLIP26.71■■□□□ 1.87
SMG9-204ENST00000596714 PPARGC1BQ86YN6 1023 aaKnown RBP26.7■■□□□ 1.86
SMG9-204ENST00000596714 AFAP1Q8N556 730 aa26.7■■□□□ 1.86
SMG9-204ENST00000596714 MYT1LQ9UL68 1186 aa26.7■■□□□ 1.86
SMG9-204ENST00000596714 TRAPPC8Q9Y2L5 1435 aa26.69■■□□□ 1.86
SMG9-204ENST00000596714 KDM5CP41229 1560 aa26.68■■□□□ 1.86
SMG9-204ENST00000596714 RSPH4AQ5TD94 716 aa26.68■■□□□ 1.86
SMG9-204ENST00000596714 FGD6Q6ZV73 1430 aa26.67■■□□□ 1.86
SMG9-204ENST00000596714 ZFYVE16Q7Z3T8 1539 aa26.65■■□□□ 1.86
SMG9-204ENST00000596714 HECW2Q9P2P5 1572 aa26.64■■□□□ 1.86
SMG9-204ENST00000596714 PTPN23Q9H3S7 1636 aa26.64■■□□□ 1.85
SMG9-204ENST00000596714 MBD5Q9P267 1494 aa26.63■■□□□ 1.85
SMG9-204ENST00000596714 ARHGEF40Q8TER5 1519 aa26.63■■□□□ 1.85
SMG9-204ENST00000596714 SPAG9O60271 1321 aaKnown RBP26.63■■□□□ 1.85
SMG9-204ENST00000596714 CCDC141Q6ZP82 1450 aa26.62■■□□□ 1.85
SMG9-204ENST00000596714 MLH3Q9UHC1 1453 aa26.62■■□□□ 1.85
SMG9-204ENST00000596714 ARHGEF5Q12774 1597 aa26.6■■□□□ 1.85
SMG9-204ENST00000596714 TCOF1Q13428 1488 aaKnown RBP26.58■■□□□ 1.85
SMG9-204ENST00000596714 TSPY4P0CV99 314 aa26.58■■□□□ 1.85
SMG9-204ENST00000596714 TSPY10P0CW01 314 aa26.58■■□□□ 1.85
SMG9-204ENST00000596714 YEATS2Q9ULM3 1422 aa26.57■■□□□ 1.84
SMG9-204ENST00000596714 FAM50AQ14320 339 aaKnown RBP26.55■■□□□ 1.84
SMG9-204ENST00000596714 ATP7AQ04656 1500 aa26.55■■□□□ 1.84
SMG9-204ENST00000596714 ATP10AO60312 1499 aa26.54■■□□□ 1.84
SMG9-204ENST00000596714 RTEL1-TNFRSF6BF6WH68 1400 aa26.52■■□□□ 1.84
SMG9-204ENST00000596714 INO80Q9ULG1 1556 aaPredicted RBP26.52■■□□□ 1.84
SMG9-204ENST00000596714 KIDINS220Q9ULH0 1771 aa26.52■■□□□ 1.84
SMG9-204ENST00000596714 C9orf84Q5VXU9 1444 aa26.51■■□□□ 1.83
SMG9-204ENST00000596714 ARID4BQ4LE39 1312 aaPredicted RBP26.51■■□□□ 1.83
SMG9-204ENST00000596714 DIP2CQ9Y2E4 1556 aa26.5■■□□□ 1.83
SMG9-204ENST00000596714 ABCA6Q8N139 1617 aa26.49■■□□□ 1.83
SMG9-204ENST00000596714 DNMT1P26358 1616 aaKnown RBP26.47■■□□□ 1.83
SMG9-204ENST00000596714 DAPK1P53355 1430 aa26.46■■□□□ 1.83
SMG9-204ENST00000596714 SHANK2Q9UPX8 1470 aa26.45■■□□□ 1.82
SMG9-204ENST00000596714 REREQ9P2R6 1566 aa26.45■■□□□ 1.82
SMG9-204ENST00000596714 ABCC5O15440 1437 aa26.44■■□□□ 1.82
SMG9-204ENST00000596714 MAST1Q9Y2H9 1570 aa26.44■■□□□ 1.82
SMG9-204ENST00000596714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.44■■□□□ 1.82
SMG9-204ENST00000596714 CROCC2H7BZ55 1655 aa26.44■■□□□ 1.82
SMG9-204ENST00000596714 ADGBQ8N7X0 1667 aa26.41■■□□□ 1.82
SMG9-204ENST00000596714 RRBP1Q9P2E9 1410 aaKnown RBP26.41■■□□□ 1.82
SMG9-204ENST00000596714 A2MP01023 1474 aa26.39■■□□□ 1.82
SMG9-204ENST00000596714 PLXNC1O60486 1568 aa26.36■■□□□ 1.81
SMG9-204ENST00000596714 AGLP35573 1532 aa26.35■■□□□ 1.81
SMG9-204ENST00000596714 ANKRD30AQ9BXX3 1397 aa26.34■■□□□ 1.81
SMG9-204ENST00000596714 DHX29Q7Z478 1369 aaKnown RBP26.33■■□□□ 1.81
SMG9-204ENST00000596714 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.81
SMG9-204ENST00000596714 BCORL1Q5H9F3 1711 aa26.33■■□□□ 1.81
SMG9-204ENST00000596714 SIGLEC1Q9BZZ2 1709 aa26.32■■□□□ 1.8
SMG9-204ENST00000596714 ITGAEP38570 1179 aa26.31■■□□□ 1.8
SMG9-204ENST00000596714 MLECQ14165 292 aa26.31■■□□□ 1.8
SMG9-204ENST00000596714 KIF15Q9NS87 1388 aa26.3■■□□□ 1.8
SMG9-204ENST00000596714 KDM4FA0A1W2PPD8 638 aa26.28■■□□□ 1.8
SMG9-204ENST00000596714 RRP7BPQ9NSQ0 103 aa26.28■■□□□ 1.8
SMG9-204ENST00000596714 ADGRL2O95490 1459 aa26.28■■□□□ 1.8
SMG9-204ENST00000596714 DUOX2Q9NRD8 1548 aa26.28■■□□□ 1.8
SMG9-204ENST00000596714 NCOA1Q15788 1441 aa26.26■■□□□ 1.79
SMG9-204ENST00000596714 ADAMTSL3P82987 1691 aa26.25■■□□□ 1.79
SMG9-204ENST00000596714 ESF1Q9H501 851 aaKnown RBP26.24■■□□□ 1.79
SMG9-204ENST00000596714 KIF3BO15066 747 aa26.23■■□□□ 1.79
SMG9-204ENST00000596714 ROCK1Q13464 1354 aa26.22■■□□□ 1.79
SMG9-204ENST00000596714 PTPRKQ15262 1439 aa26.22■■□□□ 1.79
SMG9-204ENST00000596714 ERBINQ96RT1 1412 aa26.22■■□□□ 1.79
SMG9-204ENST00000596714 MADDQ8WXG6 1647 aa26.21■■□□□ 1.79
SMG9-204ENST00000596714 EIF2AK4Q9P2K8 1649 aaKnown RBP26.21■■□□□ 1.79
SMG9-204ENST00000596714 GGT6Q6P531 493 aa26.2■■□□□ 1.78
SMG9-204ENST00000596714 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
SMG9-204ENST00000596714 FER1L4A9Z1Z3 1794 aa26.19■■□□□ 1.78
SMG9-204ENST00000596714 PPP6R1Q9UPN7 881 aa26.18■■□□□ 1.78
SMG9-204ENST00000596714 RIMS1Q86UR5 1692 aaKnown RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms