RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 SCAPERQ9BY12 1400 aa26.26■■□□□ 1.79
USHBP1-205ENST00000595993 KIF14Q15058 1648 aa26.23■■□□□ 1.79
USHBP1-205ENST00000595993 UBTFP17480 764 aaKnown RBP26.21■■□□□ 1.79
USHBP1-205ENST00000595993 LRRIQ1Q96JM4 1722 aa26.21■■□□□ 1.79
USHBP1-205ENST00000595993 FBXO41Q8TF61 875 aa26.2■■□□□ 1.78
USHBP1-205ENST00000595993 FER1L4A9Z1Z3 1794 aa26.19■■□□□ 1.78
USHBP1-205ENST00000595993 TROQ12816 1431 aaPredicted RBP26.19■■□□□ 1.78
USHBP1-205ENST00000595993 ARHGEF12Q9NZN5 1544 aa26.18■■□□□ 1.78
USHBP1-205ENST00000595993 ATP10AO60312 1499 aa26.17■■□□□ 1.78
USHBP1-205ENST00000595993 EFCAB2Q5VUJ9 269 aa26.17■■□□□ 1.78
USHBP1-205ENST00000595993 CDK11AQ9UQ88 783 aaPredicted RBP26.17■■□□□ 1.78
USHBP1-205ENST00000595993 KDM5CP41229 1560 aa26.16■■□□□ 1.78
USHBP1-205ENST00000595993 C9orf84Q5VXU9 1444 aa26.15■■□□□ 1.78
USHBP1-205ENST00000595993 EHMT2Q96KQ7 1210 aa26.14■■□□□ 1.78
USHBP1-205ENST00000595993 ZNF518AQ6AHZ1 1483 aa26.14■■□□□ 1.78
USHBP1-205ENST00000595993 ATP1B4Q9UN42 357 aaPredicted RBP26.1■■□□□ 1.77
USHBP1-205ENST00000595993 CLIP1P30622 1438 aa26.1■■□□□ 1.77
USHBP1-205ENST00000595993 ARHGAP5Q13017 1502 aa26.09■■□□□ 1.77
USHBP1-205ENST00000595993 CDC42BPBQ9Y5S2 1711 aa26.09■■□□□ 1.77
USHBP1-205ENST00000595993 REREQ9P2R6 1566 aa26.08■■□□□ 1.77
USHBP1-205ENST00000595993 HSPA2P54652 639 aa26.06■■□□□ 1.76
USHBP1-205ENST00000595993 DIP2CQ9Y2E4 1556 aa26.05■■□□□ 1.76
USHBP1-205ENST00000595993 MLECQ14165 292 aa26.05■■□□□ 1.76
USHBP1-205ENST00000595993 PREX2Q70Z35 1606 aa26.05■■□□□ 1.76
USHBP1-205ENST00000595993 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
USHBP1-205ENST00000595993 PREX1Q8TCU6 1659 aa26.03■■□□□ 1.76
USHBP1-205ENST00000595993 CCDC18Q5T9S5 1454 aa26.03■■□□□ 1.76
USHBP1-205ENST00000595993 MLH3Q9UHC1 1453 aa26.03■■□□□ 1.76
USHBP1-205ENST00000595993 AFAP1Q8N556 730 aa26.02■■□□□ 1.76
USHBP1-205ENST00000595993 ABCC1P33527 1531 aa26.01■■□□□ 1.75
USHBP1-205ENST00000595993 ABCA6Q8N139 1617 aa26■■□□□ 1.75
USHBP1-205ENST00000595993 ITSN2Q9NZM3 1697 aa25.98■■□□□ 1.75
USHBP1-205ENST00000595993 PLPPR3Q6T4P5 718 aa25.97■■□□□ 1.75
USHBP1-205ENST00000595993 AGLP35573 1532 aa25.96■■□□□ 1.75
USHBP1-205ENST00000595993 CDC42BPAQ5VT25 1732 aa25.95■■□□□ 1.74
USHBP1-205ENST00000595993 FYCO1Q9BQS8 1478 aa25.94■■□□□ 1.74
USHBP1-205ENST00000595993 TRAPPC8Q9Y2L5 1435 aa25.94■■□□□ 1.74
USHBP1-205ENST00000595993 KIDINS220Q9ULH0 1771 aa25.91■■□□□ 1.74
USHBP1-205ENST00000595993 CEBPAP49715 358 aaPredicted RBP25.9■■□□□ 1.74
USHBP1-205ENST00000595993 C3P01024 1663 aa25.89■■□□□ 1.73
USHBP1-205ENST00000595993 STRCQ7RTU9 1775 aa25.89■■□□□ 1.73
USHBP1-205ENST00000595993 SETD1BQ9UPS6 1966 aaKnown RBP25.89■■□□□ 1.73
USHBP1-205ENST00000595993 CERKQ8TCT0 537 aa25.85■■□□□ 1.73
USHBP1-205ENST00000595993 UHRF1BP1Q6BDS2 1440 aa25.85■■□□□ 1.73
USHBP1-205ENST00000595993 SAMD9LQ8IVG5 1584 aa25.84■■□□□ 1.73
USHBP1-205ENST00000595993 GPATCH8Q9UKJ3 1502 aaKnown RBP25.82■■□□□ 1.72
USHBP1-205ENST00000595993 MYT1LQ9UL68 1186 aa25.8■■□□□ 1.72
USHBP1-205ENST00000595993 CNTLNQ9NXG0 1405 aa25.78■■□□□ 1.72
USHBP1-205ENST00000595993 SYCP2Q9BX26 1530 aa25.78■■□□□ 1.72
USHBP1-205ENST00000595993 DMRT2Q9Y5R5 561 aa25.76■■□□□ 1.71
USHBP1-205ENST00000595993 MROH2AA6NES4 1674 aa25.76■■□□□ 1.71
USHBP1-205ENST00000595993 KIAA1107Q9UPP5 1409 aa25.75■■□□□ 1.71
USHBP1-205ENST00000595993 INO80Q9ULG1 1556 aaPredicted RBP25.73■■□□□ 1.71
USHBP1-205ENST00000595993 PTPRTO14522 1441 aa25.73■■□□□ 1.71
USHBP1-205ENST00000595993 PLXNC1O60486 1568 aa25.73■■□□□ 1.71
USHBP1-205ENST00000595993 PLEKHH2Q8IVE3 1493 aa25.72■■□□□ 1.71
USHBP1-205ENST00000595993 ATP7AQ04656 1500 aa25.71■■□□□ 1.71
USHBP1-205ENST00000595993 NPATQ14207 1427 aa25.69■■□□□ 1.7
USHBP1-205ENST00000595993 SPAG9O60271 1321 aaKnown RBP25.68■■□□□ 1.7
USHBP1-205ENST00000595993 LOC105371045A0A1W2PR82 267 aa25.68■■□□□ 1.7
USHBP1-205ENST00000595993 ESF1Q9H501 851 aaKnown RBP25.68■■□□□ 1.7
USHBP1-205ENST00000595993 SUPT6HQ7KZ85 1726 aaKnown RBP25.66■■□□□ 1.7
USHBP1-205ENST00000595993 NCOA1Q15788 1441 aa25.66■■□□□ 1.7
USHBP1-205ENST00000595993 HNRNPMP52272 730 aaKnown RBP eCLIP25.66■■□□□ 1.7
USHBP1-205ENST00000595993 ZNF777Q9ULD5 760 aaPredicted RBP25.66■■□□□ 1.7
USHBP1-205ENST00000595993 CFDP1Q9UEE9 299 aaPredicted RBP25.63■■□□□ 1.69
USHBP1-205ENST00000595993 CCNB3Q8WWL7 1395 aa25.63■■□□□ 1.69
USHBP1-205ENST00000595993 A2MP01023 1474 aa25.63■■□□□ 1.69
USHBP1-205ENST00000595993 LTBP4Q8N2S1 1624 aa25.63■■□□□ 1.69
USHBP1-205ENST00000595993 TIAM1Q13009 1591 aa25.62■■□□□ 1.69
USHBP1-205ENST00000595993 ZMYM3Q14202 1370 aa25.62■■□□□ 1.69
USHBP1-205ENST00000595993 CEP162Q5TB80 1403 aa25.62■■□□□ 1.69
USHBP1-205ENST00000595993 MTUS2Q5JR59 1369 aa25.6■■□□□ 1.69
USHBP1-205ENST00000595993 CLTCQ00610 1675 aaKnown RBP25.6■■□□□ 1.69
USHBP1-205ENST00000595993 ADGBQ8N7X0 1667 aa25.6■■□□□ 1.69
USHBP1-205ENST00000595993 EHBP1L1Q8N3D4 1523 aa25.59■■□□□ 1.69
USHBP1-205ENST00000595993 ZNF142P52746 1687 aaPredicted RBP25.59■■□□□ 1.69
USHBP1-205ENST00000595993 MBD5Q9P267 1494 aa25.59■■□□□ 1.69
USHBP1-205ENST00000595993 CAMSAP1Q5T5Y3 1602 aa25.57■■□□□ 1.68
USHBP1-205ENST00000595993 MYO3AQ8NEV4 1616 aa25.56■■□□□ 1.68
USHBP1-205ENST00000595993 IQSEC2Q5JU85 1478 aa25.56■■□□□ 1.68
USHBP1-205ENST00000595993 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
USHBP1-205ENST00000595993 RTEL1-TNFRSF6BF6WH68 1400 aa25.52■■□□□ 1.68
USHBP1-205ENST00000595993 PLA2R1Q13018 1463 aa25.52■■□□□ 1.68
USHBP1-205ENST00000595993 PPP6R1Q9UPN7 881 aa25.51■■□□□ 1.67
USHBP1-205ENST00000595993 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
USHBP1-205ENST00000595993 CEP170BQ9Y4F5 1589 aaPredicted RBP25.5■■□□□ 1.67
USHBP1-205ENST00000595993 TCOF1Q13428 1488 aaKnown RBP25.48■■□□□ 1.67
USHBP1-205ENST00000595993 DHX29Q7Z478 1369 aaKnown RBP25.44■■□□□ 1.66
USHBP1-205ENST00000595993 GGT6Q6P531 493 aa25.44■■□□□ 1.66
USHBP1-205ENST00000595993 FAM135AQ9P2D6 1515 aa25.42■■□□□ 1.66
USHBP1-205ENST00000595993 NCOA2Q15596 1464 aa25.41■■□□□ 1.66
USHBP1-205ENST00000595993 CCDC141Q6ZP82 1450 aa25.41■■□□□ 1.66
USHBP1-205ENST00000595993 NCKAP5LQ9HCH0 1330 aa25.4■■□□□ 1.66
USHBP1-205ENST00000595993 PKD2Q13563 968 aa25.4■■□□□ 1.66
USHBP1-205ENST00000595993 CAMSAP2Q08AD1 1489 aa25.4■■□□□ 1.66
USHBP1-205ENST00000595993 A2ML1A8K2U0 1454 aa25.39■■□□□ 1.65
USHBP1-205ENST00000595993 DNMT1P26358 1616 aaKnown RBP25.38■■□□□ 1.65
USHBP1-205ENST00000595993 ARHGEF5Q12774 1597 aa25.36■■□□□ 1.65
USHBP1-205ENST00000595993 KDM5DQ9BY66 1539 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms