RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 CDC42BPAQ5VT25 1732 aa35.88■■■■□ 3.34
PNKP-205ENST00000595081 GPATCH8Q9UKJ3 1502 aaKnown RBP35.88■■■■□ 3.33
PNKP-205ENST00000595081 NCOA2Q15596 1464 aa35.88■■■■□ 3.33
PNKP-205ENST00000595081 EFCAB2Q5VUJ9 269 aa35.88■■■■□ 3.33
PNKP-205ENST00000595081 SUPT6HQ7KZ85 1726 aaKnown RBP35.88■■■■□ 3.33
PNKP-205ENST00000595081 CCNB3Q8WWL7 1395 aa35.88■■■■□ 3.33
PNKP-205ENST00000595081 CDC42BPBQ9Y5S2 1711 aa35.87■■■■□ 3.33
PNKP-205ENST00000595081 ADGRL1O94910 1474 aa35.8■■■■□ 3.32
PNKP-205ENST00000595081 RAPGEF3O95398 923 aa35.78■■■■□ 3.32
PNKP-205ENST00000595081 CFDP1Q9UEE9 299 aaPredicted RBP35.76■■■■□ 3.32
PNKP-205ENST00000595081 SCAPERQ9BY12 1400 aa35.74■■■■□ 3.31
PNKP-205ENST00000595081 DENND4BO75064 1496 aaPredicted RBP35.74■■■■□ 3.31
PNKP-205ENST00000595081 ZNF777Q9ULD5 760 aaPredicted RBP35.74■■■■□ 3.31
PNKP-205ENST00000595081 ITSN2Q9NZM3 1697 aa35.72■■■■□ 3.31
PNKP-205ENST00000595081 FRMPD1Q5SYB0 1578 aa35.72■■■■□ 3.31
PNKP-205ENST00000595081 SAMD9LQ8IVG5 1584 aa35.68■■■■□ 3.3
PNKP-205ENST00000595081 ABCC1P33527 1531 aa35.67■■■■□ 3.3
PNKP-205ENST00000595081 RICTORQ6R327 1708 aa35.66■■■■□ 3.3
PNKP-205ENST00000595081 POGZQ7Z3K3 1410 aa35.66■■■■□ 3.3
PNKP-205ENST00000595081 ARHGEF12Q9NZN5 1544 aa35.64■■■■□ 3.3
PNKP-205ENST00000595081 ZNF644Q9H582 1327 aaPredicted RBP35.63■■■■□ 3.29
PNKP-205ENST00000595081 PPARGC1BQ86YN6 1023 aaKnown RBP35.61■■■■□ 3.29
PNKP-205ENST00000595081 MYOM3Q5VTT5 1437 aa35.6■■■■□ 3.29
PNKP-205ENST00000595081 SYCP2Q9BX26 1530 aa35.59■■■■□ 3.29
PNKP-205ENST00000595081 TRAPPC8Q9Y2L5 1435 aa35.57■■■■□ 3.29
PNKP-205ENST00000595081 AFAP1Q8N556 730 aa35.57■■■■□ 3.28
PNKP-205ENST00000595081 PLEKHH2Q8IVE3 1493 aa35.56■■■■□ 3.28
PNKP-205ENST00000595081 HNRNPMP52272 730 aaKnown RBP eCLIP35.56■■■■□ 3.28
PNKP-205ENST00000595081 ZNF518AQ6AHZ1 1483 aa35.55■■■■□ 3.28
PNKP-205ENST00000595081 ZMYM4Q5VZL5 1548 aa35.54■■■■□ 3.28
PNKP-205ENST00000595081 KIAA1107Q9UPP5 1409 aa35.54■■■■□ 3.28
PNKP-205ENST00000595081 CAMSAP2Q08AD1 1489 aa35.53■■■■□ 3.28
PNKP-205ENST00000595081 MIA2Q96PC5 1412 aa35.5■■■■□ 3.27
PNKP-205ENST00000595081 KDM5CP41229 1560 aa35.49■■■■□ 3.27
PNKP-205ENST00000595081 MBD5Q9P267 1494 aa35.46■■■■□ 3.27
PNKP-205ENST00000595081 YEATS2Q9ULM3 1422 aa35.45■■■■□ 3.27
PNKP-205ENST00000595081 FGD6Q6ZV73 1430 aa35.44■■■■□ 3.26
PNKP-205ENST00000595081 ZFYVE16Q7Z3T8 1539 aa35.43■■■■□ 3.26
PNKP-205ENST00000595081 MAGI2Q86UL8 1455 aa35.43■■■■□ 3.26
PNKP-205ENST00000595081 ARHGEF40Q8TER5 1519 aa35.42■■■■□ 3.26
PNKP-205ENST00000595081 HECW2Q9P2P5 1572 aa35.4■■■■□ 3.26
PNKP-205ENST00000595081 MYT1LQ9UL68 1186 aa35.4■■■■□ 3.26
PNKP-205ENST00000595081 PTPN23Q9H3S7 1636 aa35.39■■■■□ 3.26
PNKP-205ENST00000595081 MLH3Q9UHC1 1453 aa35.38■■■■□ 3.25
PNKP-205ENST00000595081 SPAG9O60271 1321 aaKnown RBP35.35■■■■□ 3.25
PNKP-205ENST00000595081 CCDC141Q6ZP82 1450 aa35.35■■■■□ 3.25
PNKP-205ENST00000595081 TCOF1Q13428 1488 aaKnown RBP35.32■■■■□ 3.24
PNKP-205ENST00000595081 ARHGEF5Q12774 1597 aa35.32■■■■□ 3.24
PNKP-205ENST00000595081 KIDINS220Q9ULH0 1771 aa35.3■■■■□ 3.24
PNKP-205ENST00000595081 ABCA6Q8N139 1617 aa35.28■■■■□ 3.24
PNKP-205ENST00000595081 RSPH4AQ5TD94 716 aa35.28■■■■□ 3.24
PNKP-205ENST00000595081 INO80Q9ULG1 1556 aaPredicted RBP35.28■■■■□ 3.24
PNKP-205ENST00000595081 DIP2CQ9Y2E4 1556 aa35.28■■■■□ 3.24
PNKP-205ENST00000595081 ATP7AQ04656 1500 aa35.27■■■■□ 3.24
PNKP-205ENST00000595081 ATP10AO60312 1499 aa35.27■■■■□ 3.24
PNKP-205ENST00000595081 FAM50AQ14320 339 aaKnown RBP35.24■■■■□ 3.23
PNKP-205ENST00000595081 C9orf84Q5VXU9 1444 aa35.23■■■■□ 3.23
PNKP-205ENST00000595081 SIGLEC1Q9BZZ2 1709 aa35.21■■■■□ 3.23
PNKP-205ENST00000595081 ARID4BQ4LE39 1312 aaPredicted RBP35.2■■■■□ 3.23
PNKP-205ENST00000595081 RTEL1-TNFRSF6BF6WH68 1400 aa35.19■■■■□ 3.22
PNKP-205ENST00000595081 ABCC5O15440 1437 aa35.19■■■■□ 3.22
PNKP-205ENST00000595081 TSPY4P0CV99 314 aa35.19■■■■□ 3.22
PNKP-205ENST00000595081 TSPY10P0CW01 314 aa35.19■■■■□ 3.22
PNKP-205ENST00000595081 DNMT1P26358 1616 aaKnown RBP35.16■■■■□ 3.22
PNKP-205ENST00000595081 DAPK1P53355 1430 aa35.15■■■■□ 3.22
PNKP-205ENST00000595081 KDM4FA0A1W2PPD8 638 aa35.13■■■■□ 3.21
PNKP-205ENST00000595081 REREQ9P2R6 1566 aa35.13■■■■□ 3.21
PNKP-205ENST00000595081 MAST1Q9Y2H9 1570 aa35.13■■■■□ 3.21
PNKP-205ENST00000595081 CROCC2H7BZ55 1655 aa35.11■■■■□ 3.21
PNKP-205ENST00000595081 SHANK2Q9UPX8 1470 aa35.09■■■■□ 3.21
PNKP-205ENST00000595081 A2MP01023 1474 aa35.08■■■■□ 3.21
PNKP-205ENST00000595081 RRBP1Q9P2E9 1410 aaKnown RBP35.07■■■■□ 3.21
PNKP-205ENST00000595081 ADGBQ8N7X0 1667 aa35.05■■■■□ 3.2
PNKP-205ENST00000595081 MLECQ14165 292 aa35.05■■■■□ 3.2
PNKP-205ENST00000595081 BCORL1Q5H9F3 1711 aa35.05■■■■□ 3.2
PNKP-205ENST00000595081 CHIC2Q9UKJ5 165 aa35.03■■■■□ 3.2
PNKP-205ENST00000595081 PLXNC1O60486 1568 aa35.03■■■■□ 3.2
PNKP-205ENST00000595081 AGLP35573 1532 aa35.02■■■■□ 3.2
PNKP-205ENST00000595081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.01■■■■□ 3.2
PNKP-205ENST00000595081 DHX29Q7Z478 1369 aaKnown RBP34.99■■■■□ 3.19
PNKP-205ENST00000595081 ADAMTSL3P82987 1691 aa34.98■■■■□ 3.19
PNKP-205ENST00000595081 PTPRKQ15262 1439 aa34.98■■■■□ 3.19
PNKP-205ENST00000595081 ITGAEP38570 1179 aa34.97■■■■□ 3.19
PNKP-205ENST00000595081 RRP7BPQ9NSQ0 103 aa34.95■■■■□ 3.19
PNKP-205ENST00000595081 KIF15Q9NS87 1388 aa34.93■■■■□ 3.18
PNKP-205ENST00000595081 MADDQ8WXG6 1647 aa34.92■■■■□ 3.18
PNKP-205ENST00000595081 ANKRD30AQ9BXX3 1397 aa34.92■■■■□ 3.18
PNKP-205ENST00000595081 ADGRL2O95490 1459 aa34.9■■■■□ 3.18
PNKP-205ENST00000595081 NCOA1Q15788 1441 aa34.89■■■■□ 3.18
PNKP-205ENST00000595081 DUOX2Q9NRD8 1548 aa34.87■■■■□ 3.17
PNKP-205ENST00000595081 KIF3BO15066 747 aa34.85■■■■□ 3.17
PNKP-205ENST00000595081 GGT6Q6P531 493 aa34.83■■■■□ 3.17
PNKP-205ENST00000595081 FER1L4A9Z1Z3 1794 aa34.82■■■■□ 3.17
PNKP-205ENST00000595081 RIMS1Q86UR5 1692 aaKnown RBP34.82■■■■□ 3.16
PNKP-205ENST00000595081 AEBP2Q6ZN18 517 aaPredicted RBP34.8■■■■□ 3.16
PNKP-205ENST00000595081 ROCK1Q13464 1354 aa34.78■■■■□ 3.16
PNKP-205ENST00000595081 ERBINQ96RT1 1412 aa34.78■■■■□ 3.16
PNKP-205ENST00000595081 PTPRMP28827 1452 aa34.78■■■■□ 3.16
PNKP-205ENST00000595081 EIF2AK4Q9P2K8 1649 aaKnown RBP34.76■■■■□ 3.15
PNKP-205ENST00000595081 ESF1Q9H501 851 aaKnown RBP34.73■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms