RNA–Protein interactions for RNA: ENST00000594943.1

ZNF549-203, Transcript of zinc finger protein 549, humanhuman

TSL 4 BASIC

Gene ZNF549, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-203ENST00000594943 CEP162Q5TB80 1403 aa29.01■■■□□ 2.23
ZNF549-203ENST00000594943 POGZQ7Z3K3 1410 aa29.01■■■□□ 2.23
ZNF549-203ENST00000594943 ZFYVE16Q7Z3T8 1539 aa28.97■■■□□ 2.23
ZNF549-203ENST00000594943 MAGI2Q86UL8 1455 aa28.97■■■□□ 2.23
ZNF549-203ENST00000594943 PREX2Q70Z35 1606 aa28.94■■■□□ 2.22
ZNF549-203ENST00000594943 ARID4BQ4LE39 1312 aaPredicted RBP28.93■■■□□ 2.22
ZNF549-203ENST00000594943 CDC42BPBQ9Y5S2 1711 aa28.92■■■□□ 2.22
ZNF549-203ENST00000594943 ADAMTSL3P82987 1691 aa28.9■■■□□ 2.22
ZNF549-203ENST00000594943 YEATS2Q9ULM3 1422 aa28.9■■■□□ 2.22
ZNF549-203ENST00000594943 BCORL1Q5H9F3 1711 aa28.89■■■□□ 2.22
ZNF549-203ENST00000594943 ZNF518AQ6AHZ1 1483 aa28.89■■■□□ 2.22
ZNF549-203ENST00000594943 CDC42BPAQ5VT25 1732 aa28.86■■■□□ 2.21
ZNF549-203ENST00000594943 ABCC1P33527 1531 aa28.84■■■□□ 2.21
ZNF549-203ENST00000594943 KDM5CP41229 1560 aa28.84■■■□□ 2.21
ZNF549-203ENST00000594943 MTUS2Q5JR59 1369 aa28.83■■■□□ 2.21
ZNF549-203ENST00000594943 MADDQ8WXG6 1647 aa28.81■■■□□ 2.2
ZNF549-203ENST00000594943 PTPRMP28827 1452 aa28.8■■■□□ 2.2
ZNF549-203ENST00000594943 LOC105371045A0A1W2PR82 267 aa28.79■■■□□ 2.2
ZNF549-203ENST00000594943 HECW2Q9P2P5 1572 aa28.79■■■□□ 2.2
ZNF549-203ENST00000594943 ITSN2Q9NZM3 1697 aa28.78■■■□□ 2.2
ZNF549-203ENST00000594943 EHBP1L1Q8N3D4 1523 aa28.78■■■□□ 2.2
ZNF549-203ENST00000594943 GPATCH8Q9UKJ3 1502 aaKnown RBP28.78■■■□□ 2.2
ZNF549-203ENST00000594943 ATP10AO60312 1499 aa28.78■■■□□ 2.2
ZNF549-203ENST00000594943 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
ZNF549-203ENST00000594943 SIGLEC1Q9BZZ2 1709 aa28.77■■■□□ 2.2
ZNF549-203ENST00000594943 AFAP1Q8N556 730 aa28.77■■■□□ 2.2
ZNF549-203ENST00000594943 ARHGEF12Q9NZN5 1544 aa28.75■■■□□ 2.19
ZNF549-203ENST00000594943 CCNB3Q8WWL7 1395 aa28.74■■■□□ 2.19
ZNF549-203ENST00000594943 TRAPPC8Q9Y2L5 1435 aa28.73■■■□□ 2.19
ZNF549-203ENST00000594943 SAMD9LQ8IVG5 1584 aa28.72■■■□□ 2.19
ZNF549-203ENST00000594943 MYT1LQ9UL68 1186 aa28.72■■■□□ 2.19
ZNF549-203ENST00000594943 MLH3Q9UHC1 1453 aa28.72■■■□□ 2.19
ZNF549-203ENST00000594943 RIMS1Q86UR5 1692 aaKnown RBP28.71■■■□□ 2.19
ZNF549-203ENST00000594943 ZNF777Q9ULD5 760 aaPredicted RBP28.71■■■□□ 2.19
ZNF549-203ENST00000594943 VPS8Q8N3P4 1428 aa28.69■■■□□ 2.18
ZNF549-203ENST00000594943 DIP2CQ9Y2E4 1556 aa28.69■■■□□ 2.18
ZNF549-203ENST00000594943 CFDP1Q9UEE9 299 aaPredicted RBP28.68■■■□□ 2.18
ZNF549-203ENST00000594943 SYCP2Q9BX26 1530 aa28.68■■■□□ 2.18
ZNF549-203ENST00000594943 PLEKHH2Q8IVE3 1493 aa28.67■■■□□ 2.18
ZNF549-203ENST00000594943 TIAM1Q13009 1591 aa28.67■■■□□ 2.18
ZNF549-203ENST00000594943 ABCA6Q8N139 1617 aa28.66■■■□□ 2.18
ZNF549-203ENST00000594943 REREQ9P2R6 1566 aa28.66■■■□□ 2.18
ZNF549-203ENST00000594943 MLECQ14165 292 aa28.65■■■□□ 2.18
ZNF549-203ENST00000594943 FER1L4A9Z1Z3 1794 aa28.63■■■□□ 2.17
ZNF549-203ENST00000594943 KIAA1107Q9UPP5 1409 aa28.63■■■□□ 2.17
ZNF549-203ENST00000594943 SUPT6HQ7KZ85 1726 aaKnown RBP28.6■■■□□ 2.17
ZNF549-203ENST00000594943 KIDINS220Q9ULH0 1771 aa28.6■■■□□ 2.17
ZNF549-203ENST00000594943 HNRNPMP52272 730 aaKnown RBP eCLIP28.57■■■□□ 2.16
ZNF549-203ENST00000594943 NCOA2Q15596 1464 aa28.57■■■□□ 2.16
ZNF549-203ENST00000594943 SPAG9O60271 1321 aaKnown RBP28.55■■■□□ 2.16
ZNF549-203ENST00000594943 AGLP35573 1532 aa28.54■■■□□ 2.16
ZNF549-203ENST00000594943 ATP7AQ04656 1500 aa28.53■■■□□ 2.16
ZNF549-203ENST00000594943 LRRC9Q6ZRR7 1453 aa28.52■■■□□ 2.16
ZNF549-203ENST00000594943 INO80Q9ULG1 1556 aaPredicted RBP28.51■■■□□ 2.15
ZNF549-203ENST00000594943 PLPPR3Q6T4P5 718 aa28.51■■■□□ 2.15
ZNF549-203ENST00000594943 MAP3K1Q13233 1512 aa28.51■■■□□ 2.15
ZNF549-203ENST00000594943 ZNF644Q9H582 1327 aaPredicted RBP28.48■■■□□ 2.15
ZNF549-203ENST00000594943 LMTK3Q96Q04 1460 aa28.48■■■□□ 2.15
ZNF549-203ENST00000594943 MBD5Q9P267 1494 aa28.46■■■□□ 2.15
ZNF549-203ENST00000594943 CAMSAP2Q08AD1 1489 aa28.44■■■□□ 2.14
ZNF549-203ENST00000594943 ESF1Q9H501 851 aaKnown RBP28.4■■■□□ 2.14
ZNF549-203ENST00000594943 PLXNC1O60486 1568 aa28.4■■■□□ 2.14
ZNF549-203ENST00000594943 A2MP01023 1474 aa28.4■■■□□ 2.14
ZNF549-203ENST00000594943 CCDC141Q6ZP82 1450 aa28.39■■■□□ 2.13
ZNF549-203ENST00000594943 ADGBQ8N7X0 1667 aa28.38■■■□□ 2.13
ZNF549-203ENST00000594943 KANK4Q5T7N3 995 aaPredicted RBP28.37■■■□□ 2.13
ZNF549-203ENST00000594943 RTEL1-TNFRSF6BF6WH68 1400 aa28.36■■■□□ 2.13
ZNF549-203ENST00000594943 CNTLNQ9NXG0 1405 aa28.35■■■□□ 2.13
ZNF549-203ENST00000594943 CEBPAP49715 358 aaPredicted RBP28.35■■■□□ 2.13
ZNF549-203ENST00000594943 APLP2Q06481 763 aa28.35■■■□□ 2.13
ZNF549-203ENST00000594943 PREX1Q8TCU6 1659 aa28.33■■■□□ 2.13
ZNF549-203ENST00000594943 RSPH4AQ5TD94 716 aa28.33■■■□□ 2.13
ZNF549-203ENST00000594943 ARHGEF5Q12774 1597 aa28.33■■■□□ 2.12
ZNF549-203ENST00000594943 C3P01024 1663 aa28.32■■■□□ 2.12
ZNF549-203ENST00000594943 MYOM3Q5VTT5 1437 aa28.3■■■□□ 2.12
ZNF549-203ENST00000594943 MIA2Q96PC5 1412 aa28.28■■■□□ 2.12
ZNF549-203ENST00000594943 HSPA2P54652 639 aa28.28■■■□□ 2.12
ZNF549-203ENST00000594943 MROH2AA6NES4 1674 aa28.27■■■□□ 2.12
ZNF549-203ENST00000594943 UHRF1BP1Q6BDS2 1440 aa28.26■■■□□ 2.11
ZNF549-203ENST00000594943 DHX29Q7Z478 1369 aaKnown RBP28.24■■■□□ 2.11
ZNF549-203ENST00000594943 SETD1BQ9UPS6 1966 aaKnown RBP28.22■■■□□ 2.11
ZNF549-203ENST00000594943 TSPY4P0CV99 314 aa28.22■■■□□ 2.11
ZNF549-203ENST00000594943 TSPY10P0CW01 314 aa28.22■■■□□ 2.11
ZNF549-203ENST00000594943 GGT6Q6P531 493 aa28.21■■■□□ 2.11
ZNF549-203ENST00000594943 CLTCQ00610 1675 aaKnown RBP28.2■■■□□ 2.11
ZNF549-203ENST00000594943 PPP6R1Q9UPN7 881 aa28.18■■■□□ 2.1
ZNF549-203ENST00000594943 ZMYM3Q14202 1370 aa28.18■■■□□ 2.1
ZNF549-203ENST00000594943 MAST1Q9Y2H9 1570 aa28.18■■■□□ 2.1
ZNF549-203ENST00000594943 NPATQ14207 1427 aa28.17■■■□□ 2.1
ZNF549-203ENST00000594943 KIF3BO15066 747 aa28.12■■■□□ 2.09
ZNF549-203ENST00000594943 PTPN23Q9H3S7 1636 aa28.11■■■□□ 2.09
ZNF549-203ENST00000594943 FAM135AQ9P2D6 1515 aa28.11■■■□□ 2.09
ZNF549-203ENST00000594943 FGD6Q6ZV73 1430 aa28.09■■■□□ 2.09
ZNF549-203ENST00000594943 KDM5DQ9BY66 1539 aa28.08■■■□□ 2.08
ZNF549-203ENST00000594943 ILDR1Q86SU0 546 aaPredicted RBP28.06■■■□□ 2.08
ZNF549-203ENST00000594943 PTPRKQ15262 1439 aa28.06■■■□□ 2.08
ZNF549-203ENST00000594943 SHANK2Q9UPX8 1470 aa28.06■■■□□ 2.08
ZNF549-203ENST00000594943 CROCC2H7BZ55 1655 aa28.05■■■□□ 2.08
ZNF549-203ENST00000594943 TCOF1Q13428 1488 aaKnown RBP28.04■■■□□ 2.08
ZNF549-203ENST00000594943 MYO3AQ8NEV4 1616 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms