RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SCAPERQ9BY12 1400 aa27.62■■■□□ 2.01
IRF3-208ENST00000594387 MTUS2Q5JR59 1369 aa27.6■■■□□ 2.01
IRF3-208ENST00000594387 PREX2Q70Z35 1606 aa27.59■■■□□ 2.01
IRF3-208ENST00000594387 CDC42BPAQ5VT25 1732 aa27.58■■■□□ 2.01
IRF3-208ENST00000594387 ARID4BQ4LE39 1312 aaPredicted RBP27.56■■■□□ 2
IRF3-208ENST00000594387 ZMYM4Q5VZL5 1548 aa27.53■■■□□ 2
IRF3-208ENST00000594387 MAGI2Q86UL8 1455 aa27.53■■■□□ 2
IRF3-208ENST00000594387 MYT1LQ9UL68 1186 aa27.53■■■□□ 2
IRF3-208ENST00000594387 ARHGEF40Q8TER5 1519 aa27.52■■■□□ 2
IRF3-208ENST00000594387 POGZQ7Z3K3 1410 aa27.52■■■□□ 2
IRF3-208ENST00000594387 ZFYVE16Q7Z3T8 1539 aa27.51■■■□□ 2
IRF3-208ENST00000594387 ZNF518AQ6AHZ1 1483 aa27.49■■□□□ 1.99
IRF3-208ENST00000594387 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
IRF3-208ENST00000594387 EHBP1L1Q8N3D4 1523 aa27.48■■□□□ 1.99
IRF3-208ENST00000594387 ZNF777Q9ULD5 760 aaPredicted RBP27.48■■□□□ 1.99
IRF3-208ENST00000594387 VPS8Q8N3P4 1428 aa27.48■■□□□ 1.99
IRF3-208ENST00000594387 ITSN2Q9NZM3 1697 aa27.44■■□□□ 1.98
IRF3-208ENST00000594387 CFDP1Q9UEE9 299 aaPredicted RBP27.43■■□□□ 1.98
IRF3-208ENST00000594387 BCORL1Q5H9F3 1711 aa27.43■■□□□ 1.98
IRF3-208ENST00000594387 GPATCH8Q9UKJ3 1502 aaKnown RBP27.42■■□□□ 1.98
IRF3-208ENST00000594387 AFAP1Q8N556 730 aa27.42■■□□□ 1.98
IRF3-208ENST00000594387 ABCC1P33527 1531 aa27.41■■□□□ 1.98
IRF3-208ENST00000594387 SUPT6HQ7KZ85 1726 aaKnown RBP27.41■■□□□ 1.98
IRF3-208ENST00000594387 YEATS2Q9ULM3 1422 aa27.4■■□□□ 1.98
IRF3-208ENST00000594387 TIAM1Q13009 1591 aa27.39■■□□□ 1.98
IRF3-208ENST00000594387 ADAMTSL3P82987 1691 aa27.39■■□□□ 1.97
IRF3-208ENST00000594387 HECW2Q9P2P5 1572 aa27.39■■□□□ 1.97
IRF3-208ENST00000594387 APLP2Q06481 763 aa27.38■■□□□ 1.97
IRF3-208ENST00000594387 KDM5CP41229 1560 aa27.38■■□□□ 1.97
IRF3-208ENST00000594387 ATP10AO60312 1499 aa27.38■■□□□ 1.97
IRF3-208ENST00000594387 PLEKHH2Q8IVE3 1493 aa27.36■■□□□ 1.97
IRF3-208ENST00000594387 SAMD9LQ8IVG5 1584 aa27.35■■□□□ 1.97
IRF3-208ENST00000594387 C9orf84Q5VXU9 1444 aa27.33■■□□□ 1.97
IRF3-208ENST00000594387 TRAPPC8Q9Y2L5 1435 aa27.32■■□□□ 1.96
IRF3-208ENST00000594387 ARHGEF12Q9NZN5 1544 aa27.31■■□□□ 1.96
IRF3-208ENST00000594387 MLH3Q9UHC1 1453 aa27.31■■□□□ 1.96
IRF3-208ENST00000594387 MADDQ8WXG6 1647 aa27.3■■□□□ 1.96
IRF3-208ENST00000594387 HNRNPMP52272 730 aaKnown RBP eCLIP27.3■■□□□ 1.96
IRF3-208ENST00000594387 SYCP2Q9BX26 1530 aa27.3■■□□□ 1.96
IRF3-208ENST00000594387 MLECQ14165 292 aa27.29■■□□□ 1.96
IRF3-208ENST00000594387 MAP3K1Q13233 1512 aa27.29■■□□□ 1.96
IRF3-208ENST00000594387 RIMS1Q86UR5 1692 aaKnown RBP27.28■■□□□ 1.96
IRF3-208ENST00000594387 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
IRF3-208ENST00000594387 KIAA1107Q9UPP5 1409 aa27.28■■□□□ 1.96
IRF3-208ENST00000594387 LRRC9Q6ZRR7 1453 aa27.26■■□□□ 1.95
IRF3-208ENST00000594387 SIGLEC1Q9BZZ2 1709 aa27.26■■□□□ 1.95
IRF3-208ENST00000594387 DIP2CQ9Y2E4 1556 aa27.26■■□□□ 1.95
IRF3-208ENST00000594387 PTPRMP28827 1452 aa27.25■■□□□ 1.95
IRF3-208ENST00000594387 FER1L4A9Z1Z3 1794 aa27.25■■□□□ 1.95
IRF3-208ENST00000594387 KIDINS220Q9ULH0 1771 aa27.25■■□□□ 1.95
IRF3-208ENST00000594387 ABCA6Q8N139 1617 aa27.24■■□□□ 1.95
IRF3-208ENST00000594387 SPAG9O60271 1321 aaKnown RBP27.24■■□□□ 1.95
IRF3-208ENST00000594387 REREQ9P2R6 1566 aa27.2■■□□□ 1.94
IRF3-208ENST00000594387 ZNF644Q9H582 1327 aaPredicted RBP27.17■■□□□ 1.94
IRF3-208ENST00000594387 ATP7AQ04656 1500 aa27.16■■□□□ 1.94
IRF3-208ENST00000594387 PLPPR3Q6T4P5 718 aa27.16■■□□□ 1.94
IRF3-208ENST00000594387 ESF1Q9H501 851 aaKnown RBP27.16■■□□□ 1.94
IRF3-208ENST00000594387 KANK4Q5T7N3 995 aaPredicted RBP27.15■■□□□ 1.94
IRF3-208ENST00000594387 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
IRF3-208ENST00000594387 INO80Q9ULG1 1556 aaPredicted RBP27.12■■□□□ 1.93
IRF3-208ENST00000594387 CAMSAP2Q08AD1 1489 aa27.12■■□□□ 1.93
IRF3-208ENST00000594387 ADGBQ8N7X0 1667 aa27.11■■□□□ 1.93
IRF3-208ENST00000594387 AGLP35573 1532 aa27.11■■□□□ 1.93
IRF3-208ENST00000594387 MBD5Q9P267 1494 aa27.08■■□□□ 1.93
IRF3-208ENST00000594387 CCDC141Q6ZP82 1450 aa27.06■■□□□ 1.92
IRF3-208ENST00000594387 TSPY4P0CV99 314 aa27.06■■□□□ 1.92
IRF3-208ENST00000594387 TSPY10P0CW01 314 aa27.06■■□□□ 1.92
IRF3-208ENST00000594387 MYOM3Q5VTT5 1437 aa27.06■■□□□ 1.92
IRF3-208ENST00000594387 RTEL1-TNFRSF6BF6WH68 1400 aa27.05■■□□□ 1.92
IRF3-208ENST00000594387 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
IRF3-208ENST00000594387 A2MP01023 1474 aa27.04■■□□□ 1.92
IRF3-208ENST00000594387 ARHGEF5Q12774 1597 aa27.03■■□□□ 1.92
IRF3-208ENST00000594387 SETD1BQ9UPS6 1966 aaKnown RBP27■■□□□ 1.91
IRF3-208ENST00000594387 CNTLNQ9NXG0 1405 aa26.97■■□□□ 1.91
IRF3-208ENST00000594387 PLXNC1O60486 1568 aa26.96■■□□□ 1.91
IRF3-208ENST00000594387 CEBPAP49715 358 aaPredicted RBP26.95■■□□□ 1.9
IRF3-208ENST00000594387 C3P01024 1663 aa26.95■■□□□ 1.9
IRF3-208ENST00000594387 GGT6Q6P531 493 aa26.94■■□□□ 1.9
IRF3-208ENST00000594387 PREX1Q8TCU6 1659 aa26.92■■□□□ 1.9
IRF3-208ENST00000594387 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
IRF3-208ENST00000594387 DHX29Q7Z478 1369 aaKnown RBP26.92■■□□□ 1.9
IRF3-208ENST00000594387 MROH2AA6NES4 1674 aa26.91■■□□□ 1.9
IRF3-208ENST00000594387 PPP6R1Q9UPN7 881 aa26.9■■□□□ 1.9
IRF3-208ENST00000594387 CLTCQ00610 1675 aaKnown RBP26.89■■□□□ 1.9
IRF3-208ENST00000594387 LMTK3Q96Q04 1460 aa26.88■■□□□ 1.89
IRF3-208ENST00000594387 MAST1Q9Y2H9 1570 aa26.88■■□□□ 1.89
IRF3-208ENST00000594387 KIF3BO15066 747 aa26.86■■□□□ 1.89
IRF3-208ENST00000594387 FGD6Q6ZV73 1430 aa26.84■■□□□ 1.89
IRF3-208ENST00000594387 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
IRF3-208ENST00000594387 ZMYM3Q14202 1370 aa26.82■■□□□ 1.88
IRF3-208ENST00000594387 UHRF1BP1Q6BDS2 1440 aa26.82■■□□□ 1.88
IRF3-208ENST00000594387 HSPA2P54652 639 aa26.8■■□□□ 1.88
IRF3-208ENST00000594387 TCOF1Q13428 1488 aaKnown RBP26.78■■□□□ 1.88
IRF3-208ENST00000594387 DNMT1P26358 1616 aaKnown RBP26.78■■□□□ 1.88
IRF3-208ENST00000594387 FAM50AQ14320 339 aaKnown RBP26.76■■□□□ 1.87
IRF3-208ENST00000594387 SHANK2Q9UPX8 1470 aa26.75■■□□□ 1.87
IRF3-208ENST00000594387 EIF2AK4Q9P2K8 1649 aaKnown RBP26.75■■□□□ 1.87
IRF3-208ENST00000594387 DAPK1P53355 1430 aa26.74■■□□□ 1.87
IRF3-208ENST00000594387 NPATQ14207 1427 aa26.74■■□□□ 1.87
IRF3-208ENST00000594387 WASHC2CQ9Y4E1 1318 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms