RNA–Protein interactions for RNA: ENST00000594261.5

LINC01872-201, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 5 BASIC

Gene LINC01872, Length 915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-201ENST00000594261 RAPGEF3O95398 923 aa17.97■□□□□ 0.47
LINC01872-201ENST00000594261 DENND4BO75064 1496 aaPredicted RBP17.95■□□□□ 0.46
LINC01872-201ENST00000594261 ARHGAP5Q13017 1502 aa17.95■□□□□ 0.46
LINC01872-201ENST00000594261 EFCAB2Q5VUJ9 269 aa17.95■□□□□ 0.46
LINC01872-201ENST00000594261 FRMPD1Q5SYB0 1578 aa17.94■□□□□ 0.46
LINC01872-201ENST00000594261 ADGRL1O94910 1474 aa17.94■□□□□ 0.46
LINC01872-201ENST00000594261 RICTORQ6R327 1708 aa17.93■□□□□ 0.46
LINC01872-201ENST00000594261 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
LINC01872-201ENST00000594261 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
LINC01872-201ENST00000594261 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
LINC01872-201ENST00000594261 VPS8Q8N3P4 1428 aa17.91■□□□□ 0.46
LINC01872-201ENST00000594261 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
LINC01872-201ENST00000594261 CDC42BPAQ5VT25 1732 aa17.9■□□□□ 0.46
LINC01872-201ENST00000594261 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
LINC01872-201ENST00000594261 KDM4FA0A1W2PPD8 638 aa17.88■□□□□ 0.45
LINC01872-201ENST00000594261 POGZQ7Z3K3 1410 aa17.86■□□□□ 0.45
LINC01872-201ENST00000594261 ZMYM4Q5VZL5 1548 aa17.86■□□□□ 0.45
LINC01872-201ENST00000594261 TIAM1Q13009 1591 aa17.85■□□□□ 0.45
LINC01872-201ENST00000594261 ARHGEF40Q8TER5 1519 aa17.84■□□□□ 0.45
LINC01872-201ENST00000594261 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.45
LINC01872-201ENST00000594261 ZFYVE16Q7Z3T8 1539 aa17.82■□□□□ 0.44
LINC01872-201ENST00000594261 GPATCH8Q9UKJ3 1502 aaKnown RBP17.82■□□□□ 0.44
LINC01872-201ENST00000594261 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
LINC01872-201ENST00000594261 ABCC1P33527 1531 aa17.82■□□□□ 0.44
LINC01872-201ENST00000594261 ZNF518AQ6AHZ1 1483 aa17.82■□□□□ 0.44
LINC01872-201ENST00000594261 MAGI2Q86UL8 1455 aa17.82■□□□□ 0.44
LINC01872-201ENST00000594261 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
LINC01872-201ENST00000594261 ITSN2Q9NZM3 1697 aa17.8■□□□□ 0.44
LINC01872-201ENST00000594261 ARID4BQ4LE39 1312 aaPredicted RBP17.79■□□□□ 0.44
LINC01872-201ENST00000594261 CFDP1Q9UEE9 299 aaPredicted RBP17.79■□□□□ 0.44
LINC01872-201ENST00000594261 YEATS2Q9ULM3 1422 aa17.79■□□□□ 0.44
LINC01872-201ENST00000594261 AFAP1Q8N556 730 aa17.78■□□□□ 0.44
LINC01872-201ENST00000594261 MYT1LQ9UL68 1186 aa17.78■□□□□ 0.44
LINC01872-201ENST00000594261 KDM5CP41229 1560 aa17.78■□□□□ 0.44
LINC01872-201ENST00000594261 SAMD9LQ8IVG5 1584 aa17.78■□□□□ 0.44
LINC01872-201ENST00000594261 MAP3K1Q13233 1512 aa17.77■□□□□ 0.43
LINC01872-201ENST00000594261 ARHGEF12Q9NZN5 1544 aa17.77■□□□□ 0.43
LINC01872-201ENST00000594261 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
LINC01872-201ENST00000594261 HECW2Q9P2P5 1572 aa17.76■□□□□ 0.43
LINC01872-201ENST00000594261 LRRC9Q6ZRR7 1453 aa17.75■□□□□ 0.43
LINC01872-201ENST00000594261 APLP2Q06481 763 aa17.75■□□□□ 0.43
LINC01872-201ENST00000594261 SYCP2Q9BX26 1530 aa17.75■□□□□ 0.43
LINC01872-201ENST00000594261 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
LINC01872-201ENST00000594261 BCORL1Q5H9F3 1711 aa17.74■□□□□ 0.43
LINC01872-201ENST00000594261 PLEKHH2Q8IVE3 1493 aa17.74■□□□□ 0.43
LINC01872-201ENST00000594261 ATP10AO60312 1499 aa17.72■□□□□ 0.43
LINC01872-201ENST00000594261 ADAMTSL3P82987 1691 aa17.71■□□□□ 0.43
LINC01872-201ENST00000594261 MLH3Q9UHC1 1453 aa17.71■□□□□ 0.43
LINC01872-201ENST00000594261 HNRNPMP52272 730 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC01872-201ENST00000594261 C9orf84Q5VXU9 1444 aa17.71■□□□□ 0.43
LINC01872-201ENST00000594261 KIAA1107Q9UPP5 1409 aa17.71■□□□□ 0.43
LINC01872-201ENST00000594261 SIGLEC1Q9BZZ2 1709 aa17.7■□□□□ 0.42
LINC01872-201ENST00000594261 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
LINC01872-201ENST00000594261 DIP2CQ9Y2E4 1556 aa17.69■□□□□ 0.42
LINC01872-201ENST00000594261 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
LINC01872-201ENST00000594261 KIDINS220Q9ULH0 1771 aa17.68■□□□□ 0.42
LINC01872-201ENST00000594261 MADDQ8WXG6 1647 aa17.67■□□□□ 0.42
LINC01872-201ENST00000594261 ZNF644Q9H582 1327 aaPredicted RBP17.67■□□□□ 0.42
LINC01872-201ENST00000594261 SPAG9O60271 1321 aaKnown RBP17.66■□□□□ 0.42
LINC01872-201ENST00000594261 MLECQ14165 292 aa17.65■□□□□ 0.42
LINC01872-201ENST00000594261 CAMSAP2Q08AD1 1489 aa17.64■□□□□ 0.41
LINC01872-201ENST00000594261 RIMS1Q86UR5 1692 aaKnown RBP17.64■□□□□ 0.41
LINC01872-201ENST00000594261 REREQ9P2R6 1566 aa17.63■□□□□ 0.41
LINC01872-201ENST00000594261 PTPRMP28827 1452 aa17.63■□□□□ 0.41
LINC01872-201ENST00000594261 ATP7AQ04656 1500 aa17.62■□□□□ 0.41
LINC01872-201ENST00000594261 FER1L4A9Z1Z3 1794 aa17.62■□□□□ 0.41
LINC01872-201ENST00000594261 INO80Q9ULG1 1556 aaPredicted RBP17.62■□□□□ 0.41
LINC01872-201ENST00000594261 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
LINC01872-201ENST00000594261 MYOM3Q5VTT5 1437 aa17.6■□□□□ 0.41
LINC01872-201ENST00000594261 CCDC141Q6ZP82 1450 aa17.59■□□□□ 0.41
LINC01872-201ENST00000594261 AGLP35573 1532 aa17.57■□□□□ 0.4
LINC01872-201ENST00000594261 MIA2Q96PC5 1412 aa17.57■□□□□ 0.4
LINC01872-201ENST00000594261 RSPH4AQ5TD94 716 aa17.57■□□□□ 0.4
LINC01872-201ENST00000594261 ADGBQ8N7X0 1667 aa17.56■□□□□ 0.4
LINC01872-201ENST00000594261 ARHGEF5Q12774 1597 aa17.56■□□□□ 0.4
LINC01872-201ENST00000594261 RTEL1-TNFRSF6BF6WH68 1400 aa17.55■□□□□ 0.4
LINC01872-201ENST00000594261 A2MP01023 1474 aa17.54■□□□□ 0.4
LINC01872-201ENST00000594261 TSPY4P0CV99 314 aa17.52■□□□□ 0.4
LINC01872-201ENST00000594261 TSPY10P0CW01 314 aa17.52■□□□□ 0.4
LINC01872-201ENST00000594261 ESF1Q9H501 851 aaKnown RBP17.52■□□□□ 0.4
LINC01872-201ENST00000594261 PTPN23Q9H3S7 1636 aa17.51■□□□□ 0.39
LINC01872-201ENST00000594261 PLXNC1O60486 1568 aa17.51■□□□□ 0.39
LINC01872-201ENST00000594261 FGD6Q6ZV73 1430 aa17.48■□□□□ 0.39
LINC01872-201ENST00000594261 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
LINC01872-201ENST00000594261 DHX29Q7Z478 1369 aaKnown RBP17.45■□□□□ 0.38
LINC01872-201ENST00000594261 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
LINC01872-201ENST00000594261 CEBPAP49715 358 aaPredicted RBP17.44■□□□□ 0.38
LINC01872-201ENST00000594261 GGT6Q6P531 493 aa17.44■□□□□ 0.38
LINC01872-201ENST00000594261 CROCC2H7BZ55 1655 aa17.44■□□□□ 0.38
LINC01872-201ENST00000594261 C3P01024 1663 aa17.44■□□□□ 0.38
LINC01872-201ENST00000594261 CNTLNQ9NXG0 1405 aa17.44■□□□□ 0.38
LINC01872-201ENST00000594261 DNMT1P26358 1616 aaKnown RBP17.42■□□□□ 0.38
LINC01872-201ENST00000594261 CLTCQ00610 1675 aaKnown RBP17.42■□□□□ 0.38
LINC01872-201ENST00000594261 KIF3BO15066 747 aa17.41■□□□□ 0.38
LINC01872-201ENST00000594261 MROH2AA6NES4 1674 aa17.41■□□□□ 0.38
LINC01872-201ENST00000594261 ABCC5O15440 1437 aa17.4■□□□□ 0.38
LINC01872-201ENST00000594261 DAPK1P53355 1430 aa17.4■□□□□ 0.38
LINC01872-201ENST00000594261 LMTK3Q96Q04 1460 aa17.4■□□□□ 0.38
LINC01872-201ENST00000594261 SHANK2Q9UPX8 1470 aa17.4■□□□□ 0.38
LINC01872-201ENST00000594261 SETD1BQ9UPS6 1966 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms