RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 ATP1B4Q9UN42 357 aaPredicted RBP35.7■■■■□ 3.31
USF2-204ENST00000593708 POGZQ7Z3K3 1410 aa35.66■■■■□ 3.3
USF2-204ENST00000593708 SCAPERQ9BY12 1400 aa35.65■■■■□ 3.3
USF2-204ENST00000593708 MAGI2Q86UL8 1455 aa35.62■■■■□ 3.29
USF2-204ENST00000593708 PCF11O94913 1555 aaKnown RBP35.59■■■■□ 3.29
USF2-204ENST00000593708 TROQ12816 1431 aaPredicted RBP35.58■■■■□ 3.29
USF2-204ENST00000593708 LMTK3Q96Q04 1460 aa35.58■■■■□ 3.29
USF2-204ENST00000593708 CDK11AQ9UQ88 783 aaPredicted RBP35.54■■■■□ 3.28
USF2-204ENST00000593708 EFCAB2Q5VUJ9 269 aa35.51■■■■□ 3.28
USF2-204ENST00000593708 FER1L4A9Z1Z3 1794 aa35.5■■■■□ 3.27
USF2-204ENST00000593708 ARHGAP5Q13017 1502 aa35.49■■■■□ 3.27
USF2-204ENST00000593708 CLIP1P30622 1438 aa35.48■■■■□ 3.27
USF2-204ENST00000593708 CDC42BPBQ9Y5S2 1711 aa35.47■■■■□ 3.27
USF2-204ENST00000593708 CASKIN1Q8WXD9 1431 aa35.45■■■■□ 3.27
USF2-204ENST00000593708 ATP10AO60312 1499 aa35.45■■■■□ 3.27
USF2-204ENST00000593708 KDM5CP41229 1560 aa35.45■■■■□ 3.27
USF2-204ENST00000593708 ZNF518AQ6AHZ1 1483 aa35.43■■■■□ 3.26
USF2-204ENST00000593708 MLECQ14165 292 aa35.43■■■■□ 3.26
USF2-204ENST00000593708 C9orf84Q5VXU9 1444 aa35.42■■■■□ 3.26
USF2-204ENST00000593708 ARHGEF12Q9NZN5 1544 aa35.41■■■■□ 3.26
USF2-204ENST00000593708 PREX2Q70Z35 1606 aa35.4■■■■□ 3.26
USF2-204ENST00000593708 PLPPR3Q6T4P5 718 aa35.4■■■■□ 3.26
USF2-204ENST00000593708 CCDC18Q5T9S5 1454 aa35.4■■■■□ 3.26
USF2-204ENST00000593708 AFAP1Q8N556 730 aa35.36■■■■□ 3.25
USF2-204ENST00000593708 DIP2CQ9Y2E4 1556 aa35.34■■■■□ 3.25
USF2-204ENST00000593708 ABCC1P33527 1531 aa35.32■■■■□ 3.25
USF2-204ENST00000593708 HSPA2P54652 639 aa35.32■■■■□ 3.24
USF2-204ENST00000593708 FYCO1Q9BQS8 1478 aa35.32■■■■□ 3.24
USF2-204ENST00000593708 CDC42BPAQ5VT25 1732 aa35.32■■■■□ 3.24
USF2-204ENST00000593708 ABCA6Q8N139 1617 aa35.32■■■■□ 3.24
USF2-204ENST00000593708 ITSN2Q9NZM3 1697 aa35.3■■■■□ 3.24
USF2-204ENST00000593708 TRAPPC8Q9Y2L5 1435 aa35.26■■■■□ 3.24
USF2-204ENST00000593708 REREQ9P2R6 1566 aa35.25■■■■□ 3.23
USF2-204ENST00000593708 MLH3Q9UHC1 1453 aa35.24■■■■□ 3.23
USF2-204ENST00000593708 FBXO41Q8TF61 875 aa35.2■■■■□ 3.23
USF2-204ENST00000593708 PREX1Q8TCU6 1659 aa35.2■■■■□ 3.23
USF2-204ENST00000593708 KIDINS220Q9ULH0 1771 aa35.18■■■■□ 3.22
USF2-204ENST00000593708 CEBPAP49715 358 aaPredicted RBP35.17■■■■□ 3.22
USF2-204ENST00000593708 MYT1LQ9UL68 1186 aa35.15■■■■□ 3.22
USF2-204ENST00000593708 SAMD9LQ8IVG5 1584 aa35.15■■■■□ 3.22
USF2-204ENST00000593708 AGLP35573 1532 aa35.11■■■■□ 3.21
USF2-204ENST00000593708 GPATCH8Q9UKJ3 1502 aaKnown RBP35.11■■■■□ 3.21
USF2-204ENST00000593708 SYCP2Q9BX26 1530 aa35.09■■■■□ 3.21
USF2-204ENST00000593708 C3P01024 1663 aa35.08■■■■□ 3.21
USF2-204ENST00000593708 SETD1BQ9UPS6 1966 aaKnown RBP35.04■■■■□ 3.2
USF2-204ENST00000593708 ZNF777Q9ULD5 760 aaPredicted RBP35.02■■■■□ 3.2
USF2-204ENST00000593708 STRCQ7RTU9 1775 aa35.01■■■■□ 3.2
USF2-204ENST00000593708 UHRF1BP1Q6BDS2 1440 aa34.97■■■■□ 3.19
USF2-204ENST00000593708 INO80Q9ULG1 1556 aaPredicted RBP34.95■■■■□ 3.18
USF2-204ENST00000593708 HNRNPMP52272 730 aaKnown RBP eCLIP34.94■■■■□ 3.18
USF2-204ENST00000593708 ATP7AQ04656 1500 aa34.92■■■■□ 3.18
USF2-204ENST00000593708 KIAA1107Q9UPP5 1409 aa34.92■■■■□ 3.18
USF2-204ENST00000593708 SUPT6HQ7KZ85 1726 aaKnown RBP34.92■■■■□ 3.18
USF2-204ENST00000593708 CCNB3Q8WWL7 1395 aa34.91■■■■□ 3.18
USF2-204ENST00000593708 MTUS2Q5JR59 1369 aa34.9■■■■□ 3.18
USF2-204ENST00000593708 SPAG9O60271 1321 aaKnown RBP34.9■■■■□ 3.18
USF2-204ENST00000593708 TIAM1Q13009 1591 aa34.89■■■■□ 3.18
USF2-204ENST00000593708 CFDP1Q9UEE9 299 aaPredicted RBP34.89■■■■□ 3.18
USF2-204ENST00000593708 PLXNC1O60486 1568 aa34.88■■■■□ 3.17
USF2-204ENST00000593708 PLEKHH2Q8IVE3 1493 aa34.88■■■■□ 3.17
USF2-204ENST00000593708 CNTLNQ9NXG0 1405 aa34.86■■■■□ 3.17
USF2-204ENST00000593708 EHBP1L1Q8N3D4 1523 aa34.86■■■■□ 3.17
USF2-204ENST00000593708 MROH2AA6NES4 1674 aa34.86■■■■□ 3.17
USF2-204ENST00000593708 CEP162Q5TB80 1403 aa34.85■■■■□ 3.17
USF2-204ENST00000593708 CERKQ8TCT0 537 aa34.85■■■■□ 3.17
USF2-204ENST00000593708 ESF1Q9H501 851 aaKnown RBP34.85■■■■□ 3.17
USF2-204ENST00000593708 ZNF644Q9H582 1327 aaPredicted RBP34.8■■■■□ 3.16
USF2-204ENST00000593708 A2MP01023 1474 aa34.78■■■■□ 3.16
USF2-204ENST00000593708 CLTCQ00610 1675 aaKnown RBP34.78■■■■□ 3.16
USF2-204ENST00000593708 MBD5Q9P267 1494 aa34.75■■■■□ 3.15
USF2-204ENST00000593708 ADGBQ8N7X0 1667 aa34.75■■■■□ 3.15
USF2-204ENST00000593708 NPATQ14207 1427 aa34.73■■■■□ 3.15
USF2-204ENST00000593708 DMRT2Q9Y5R5 561 aa34.72■■■■□ 3.15
USF2-204ENST00000593708 ZMYM3Q14202 1370 aa34.72■■■■□ 3.15
USF2-204ENST00000593708 PTPRTO14522 1441 aa34.69■■■■□ 3.14
USF2-204ENST00000593708 NCOA1Q15788 1441 aa34.69■■■■□ 3.14
USF2-204ENST00000593708 NCOA2Q15596 1464 aa34.65■■■■□ 3.14
USF2-204ENST00000593708 MYO3AQ8NEV4 1616 aa34.64■■■■□ 3.14
USF2-204ENST00000593708 CAMSAP1Q5T5Y3 1602 aa34.63■■■■□ 3.13
USF2-204ENST00000593708 ZNF142P52746 1687 aaPredicted RBP34.62■■■■□ 3.13
USF2-204ENST00000593708 PTPRKQ15262 1439 aa34.61■■■■□ 3.13
USF2-204ENST00000593708 GGT6Q6P531 493 aa34.6■■■■□ 3.13
USF2-204ENST00000593708 RTEL1-TNFRSF6BF6WH68 1400 aa34.6■■■■□ 3.13
USF2-204ENST00000593708 CAMSAP2Q08AD1 1489 aa34.59■■■■□ 3.13
USF2-204ENST00000593708 LTBP4Q8N2S1 1624 aa34.59■■■■□ 3.13
USF2-204ENST00000593708 CCDC141Q6ZP82 1450 aa34.56■■■■□ 3.12
USF2-204ENST00000593708 CEP170BQ9Y4F5 1589 aaPredicted RBP34.55■■■■□ 3.12
USF2-204ENST00000593708 DHX29Q7Z478 1369 aaKnown RBP34.52■■■■□ 3.12
USF2-204ENST00000593708 PPP6R1Q9UPN7 881 aa34.48■■■■□ 3.11
USF2-204ENST00000593708 VPS8Q8N3P4 1428 aa34.47■■■■□ 3.11
USF2-204ENST00000593708 ARHGEF5Q12774 1597 aa34.46■■■■□ 3.11
USF2-204ENST00000593708 LOC105371045A0A1W2PR82 267 aa34.46■■■■□ 3.11
USF2-204ENST00000593708 NCKAP5LQ9HCH0 1330 aa34.46■■■■□ 3.11
USF2-204ENST00000593708 PLA2R1Q13018 1463 aa34.46■■■■□ 3.11
USF2-204ENST00000593708 LRRC9Q6ZRR7 1453 aa34.45■■■■□ 3.1
USF2-204ENST00000593708 TCOF1Q13428 1488 aaKnown RBP34.43■■■■□ 3.1
USF2-204ENST00000593708 KIF3BO15066 747 aa34.4■■■■□ 3.1
USF2-204ENST00000593708 KDM5DQ9BY66 1539 aa34.4■■■■□ 3.1
USF2-204ENST00000593708 DNMT1P26358 1616 aaKnown RBP34.39■■■■□ 3.1
USF2-204ENST00000593708 A2ML1A8K2U0 1454 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms