RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
LIG1-205ENST00000593425 PCF11O94913 1555 aaKnown RBP27.1■■□□□ 1.93
LIG1-205ENST00000593425 POGZQ7Z3K3 1410 aa27.1■■□□□ 1.93
LIG1-205ENST00000593425 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
LIG1-205ENST00000593425 MAGI2Q86UL8 1455 aa27.08■■□□□ 1.93
LIG1-205ENST00000593425 LMTK3Q96Q04 1460 aa27.07■■□□□ 1.92
LIG1-205ENST00000593425 TROQ12816 1431 aaPredicted RBP27.02■■□□□ 1.92
LIG1-205ENST00000593425 FER1L4A9Z1Z3 1794 aa27.01■■□□□ 1.91
LIG1-205ENST00000593425 CDK11AQ9UQ88 783 aaPredicted RBP26.99■■□□□ 1.91
LIG1-205ENST00000593425 EFCAB2Q5VUJ9 269 aa26.98■■□□□ 1.91
LIG1-205ENST00000593425 ARHGAP5Q13017 1502 aa26.97■■□□□ 1.91
LIG1-205ENST00000593425 MLECQ14165 292 aa26.96■■□□□ 1.91
LIG1-205ENST00000593425 PLPPR3Q6T4P5 718 aa26.95■■□□□ 1.9
LIG1-205ENST00000593425 CLIP1P30622 1438 aa26.95■■□□□ 1.9
LIG1-205ENST00000593425 ATP10AO60312 1499 aa26.94■■□□□ 1.9
LIG1-205ENST00000593425 CDC42BPBQ9Y5S2 1711 aa26.94■■□□□ 1.9
LIG1-205ENST00000593425 C9orf84Q5VXU9 1444 aa26.94■■□□□ 1.9
LIG1-205ENST00000593425 KDM5CP41229 1560 aa26.93■■□□□ 1.9
LIG1-205ENST00000593425 ARHGEF12Q9NZN5 1544 aa26.92■■□□□ 1.9
LIG1-205ENST00000593425 ZNF518AQ6AHZ1 1483 aa26.92■■□□□ 1.9
LIG1-205ENST00000593425 PREX2Q70Z35 1606 aa26.89■■□□□ 1.9
LIG1-205ENST00000593425 CASKIN1Q8WXD9 1431 aa26.89■■□□□ 1.89
LIG1-205ENST00000593425 HSPA2P54652 639 aa26.88■■□□□ 1.89
LIG1-205ENST00000593425 CCDC18Q5T9S5 1454 aa26.87■■□□□ 1.89
LIG1-205ENST00000593425 AFAP1Q8N556 730 aa26.86■■□□□ 1.89
LIG1-205ENST00000593425 DIP2CQ9Y2E4 1556 aa26.86■■□□□ 1.89
LIG1-205ENST00000593425 FBXO41Q8TF61 875 aa26.85■■□□□ 1.89
LIG1-205ENST00000593425 ABCA6Q8N139 1617 aa26.83■■□□□ 1.89
LIG1-205ENST00000593425 ABCC1P33527 1531 aa26.83■■□□□ 1.89
LIG1-205ENST00000593425 ITSN2Q9NZM3 1697 aa26.82■■□□□ 1.88
LIG1-205ENST00000593425 CDC42BPAQ5VT25 1732 aa26.82■■□□□ 1.88
LIG1-205ENST00000593425 REREQ9P2R6 1566 aa26.8■■□□□ 1.88
LIG1-205ENST00000593425 PREX1Q8TCU6 1659 aa26.79■■□□□ 1.88
LIG1-205ENST00000593425 FYCO1Q9BQS8 1478 aa26.79■■□□□ 1.88
LIG1-205ENST00000593425 TRAPPC8Q9Y2L5 1435 aa26.78■■□□□ 1.88
LIG1-205ENST00000593425 MLH3Q9UHC1 1453 aa26.77■■□□□ 1.88
LIG1-205ENST00000593425 MYT1LQ9UL68 1186 aa26.75■■□□□ 1.87
LIG1-205ENST00000593425 CEBPAP49715 358 aaPredicted RBP26.74■■□□□ 1.87
LIG1-205ENST00000593425 KIDINS220Q9ULH0 1771 aa26.73■■□□□ 1.87
LIG1-205ENST00000593425 SAMD9LQ8IVG5 1584 aa26.7■■□□□ 1.86
LIG1-205ENST00000593425 C3P01024 1663 aa26.69■■□□□ 1.86
LIG1-205ENST00000593425 AGLP35573 1532 aa26.69■■□□□ 1.86
LIG1-205ENST00000593425 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
LIG1-205ENST00000593425 GPATCH8Q9UKJ3 1502 aaKnown RBP26.64■■□□□ 1.85
LIG1-205ENST00000593425 STRCQ7RTU9 1775 aa26.63■■□□□ 1.85
LIG1-205ENST00000593425 UHRF1BP1Q6BDS2 1440 aa26.62■■□□□ 1.85
LIG1-205ENST00000593425 ZNF777Q9ULD5 760 aaPredicted RBP26.6■■□□□ 1.85
LIG1-205ENST00000593425 SETD1BQ9UPS6 1966 aaKnown RBP26.58■■□□□ 1.85
LIG1-205ENST00000593425 CERKQ8TCT0 537 aa26.55■■□□□ 1.84
LIG1-205ENST00000593425 SUPT6HQ7KZ85 1726 aaKnown RBP26.54■■□□□ 1.84
LIG1-205ENST00000593425 ATP7AQ04656 1500 aa26.54■■□□□ 1.84
LIG1-205ENST00000593425 INO80Q9ULG1 1556 aaPredicted RBP26.54■■□□□ 1.84
LIG1-205ENST00000593425 HNRNPMP52272 730 aaKnown RBP eCLIP26.53■■□□□ 1.84
LIG1-205ENST00000593425 ESF1Q9H501 851 aaKnown RBP26.52■■□□□ 1.84
LIG1-205ENST00000593425 MROH2AA6NES4 1674 aa26.51■■□□□ 1.83
LIG1-205ENST00000593425 CNTLNQ9NXG0 1405 aa26.51■■□□□ 1.83
LIG1-205ENST00000593425 KIAA1107Q9UPP5 1409 aa26.5■■□□□ 1.83
LIG1-205ENST00000593425 CCNB3Q8WWL7 1395 aa26.5■■□□□ 1.83
LIG1-205ENST00000593425 SPAG9O60271 1321 aaKnown RBP26.5■■□□□ 1.83
LIG1-205ENST00000593425 PLXNC1O60486 1568 aa26.5■■□□□ 1.83
LIG1-205ENST00000593425 PLEKHH2Q8IVE3 1493 aa26.49■■□□□ 1.83
LIG1-205ENST00000593425 MTUS2Q5JR59 1369 aa26.49■■□□□ 1.83
LIG1-205ENST00000593425 CFDP1Q9UEE9 299 aaPredicted RBP26.49■■□□□ 1.83
LIG1-205ENST00000593425 TIAM1Q13009 1591 aa26.49■■□□□ 1.83
LIG1-205ENST00000593425 EHBP1L1Q8N3D4 1523 aa26.46■■□□□ 1.83
LIG1-205ENST00000593425 CLTCQ00610 1675 aaKnown RBP26.44■■□□□ 1.82
LIG1-205ENST00000593425 DMRT2Q9Y5R5 561 aa26.44■■□□□ 1.82
LIG1-205ENST00000593425 A2MP01023 1474 aa26.43■■□□□ 1.82
LIG1-205ENST00000593425 ADGBQ8N7X0 1667 aa26.41■■□□□ 1.82
LIG1-205ENST00000593425 PTPRTO14522 1441 aa26.4■■□□□ 1.82
LIG1-205ENST00000593425 NPATQ14207 1427 aa26.4■■□□□ 1.82
LIG1-205ENST00000593425 ZNF644Q9H582 1327 aaPredicted RBP26.39■■□□□ 1.82
LIG1-205ENST00000593425 CEP162Q5TB80 1403 aa26.39■■□□□ 1.82
LIG1-205ENST00000593425 ZMYM3Q14202 1370 aa26.39■■□□□ 1.82
LIG1-205ENST00000593425 NCOA1Q15788 1441 aa26.38■■□□□ 1.81
LIG1-205ENST00000593425 MBD5Q9P267 1494 aa26.37■■□□□ 1.81
LIG1-205ENST00000593425 CAMSAP1Q5T5Y3 1602 aa26.36■■□□□ 1.81
LIG1-205ENST00000593425 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
LIG1-205ENST00000593425 ZNF142P52746 1687 aaPredicted RBP26.34■■□□□ 1.81
LIG1-205ENST00000593425 LTBP4Q8N2S1 1624 aa26.32■■□□□ 1.8
LIG1-205ENST00000593425 GGT6Q6P531 493 aa26.3■■□□□ 1.8
LIG1-205ENST00000593425 PTPRKQ15262 1439 aa26.3■■□□□ 1.8
LIG1-205ENST00000593425 NCOA2Q15596 1464 aa26.29■■□□□ 1.8
LIG1-205ENST00000593425 RTEL1-TNFRSF6BF6WH68 1400 aa26.28■■□□□ 1.8
LIG1-205ENST00000593425 CEP170BQ9Y4F5 1589 aaPredicted RBP26.28■■□□□ 1.8
LIG1-205ENST00000593425 CAMSAP2Q08AD1 1489 aa26.25■■□□□ 1.79
LIG1-205ENST00000593425 CCDC141Q6ZP82 1450 aa26.24■■□□□ 1.79
LIG1-205ENST00000593425 DHX29Q7Z478 1369 aaKnown RBP26.21■■□□□ 1.79
LIG1-205ENST00000593425 NCKAP5LQ9HCH0 1330 aa26.21■■□□□ 1.79
LIG1-205ENST00000593425 PLA2R1Q13018 1463 aa26.21■■□□□ 1.79
LIG1-205ENST00000593425 PPP6R1Q9UPN7 881 aa26.2■■□□□ 1.78
LIG1-205ENST00000593425 TCOF1Q13428 1488 aaKnown RBP26.18■■□□□ 1.78
LIG1-205ENST00000593425 IQSEC2Q5JU85 1478 aa26.18■■□□□ 1.78
LIG1-205ENST00000593425 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
LIG1-205ENST00000593425 DNMT1P26358 1616 aaKnown RBP26.15■■□□□ 1.78
LIG1-205ENST00000593425 KDM5DQ9BY66 1539 aa26.14■■□□□ 1.78
LIG1-205ENST00000593425 A2ML1A8K2U0 1454 aa26.14■■□□□ 1.78
LIG1-205ENST00000593425 KIF3BO15066 747 aa26.13■■□□□ 1.77
LIG1-205ENST00000593425 VPS8Q8N3P4 1428 aa26.13■■□□□ 1.77
LIG1-205ENST00000593425 ZNF335Q9H4Z2 1342 aaPredicted RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms