RNA–Protein interactions for RNA: ENST00000593337.5

IRF3-205, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-205ENST00000593337 ITSN2Q9NZM3 1697 aa28.93■■■□□ 2.22
IRF3-205ENST00000593337 GPATCH8Q9UKJ3 1502 aaKnown RBP28.91■■■□□ 2.22
IRF3-205ENST00000593337 NCOA2Q15596 1464 aa28.91■■■□□ 2.22
IRF3-205ENST00000593337 KANK4Q5T7N3 995 aaPredicted RBP28.9■■■□□ 2.22
IRF3-205ENST00000593337 AKNAQ7Z591 1439 aa28.9■■■□□ 2.22
IRF3-205ENST00000593337 RICTORQ6R327 1708 aa28.89■■■□□ 2.21
IRF3-205ENST00000593337 FRMPD1Q5SYB0 1578 aa28.88■■■□□ 2.21
IRF3-205ENST00000593337 CCNB3Q8WWL7 1395 aa28.85■■■□□ 2.21
IRF3-205ENST00000593337 APLP2Q06481 763 aa28.84■■■□□ 2.21
IRF3-205ENST00000593337 ADGRL1O94910 1474 aa28.84■■■□□ 2.21
IRF3-205ENST00000593337 SAMD9LQ8IVG5 1584 aa28.83■■■□□ 2.21
IRF3-205ENST00000593337 EFCAB2Q5VUJ9 269 aa28.82■■■□□ 2.2
IRF3-205ENST00000593337 ABCC1P33527 1531 aa28.82■■■□□ 2.2
IRF3-205ENST00000593337 DENND4BO75064 1496 aaPredicted RBP28.78■■■□□ 2.2
IRF3-205ENST00000593337 SCAPERQ9BY12 1400 aa28.76■■■□□ 2.19
IRF3-205ENST00000593337 POGZQ7Z3K3 1410 aa28.75■■■□□ 2.19
IRF3-205ENST00000593337 ZMYM4Q5VZL5 1548 aa28.74■■■□□ 2.19
IRF3-205ENST00000593337 ARHGEF12Q9NZN5 1544 aa28.73■■■□□ 2.19
IRF3-205ENST00000593337 SYCP2Q9BX26 1530 aa28.71■■■□□ 2.19
IRF3-205ENST00000593337 RAPGEF3O95398 923 aa28.71■■■□□ 2.19
IRF3-205ENST00000593337 KDM5CP41229 1560 aa28.71■■■□□ 2.19
IRF3-205ENST00000593337 CFDP1Q9UEE9 299 aaPredicted RBP28.7■■■□□ 2.18
IRF3-205ENST00000593337 MYOM3Q5VTT5 1437 aa28.69■■■□□ 2.18
IRF3-205ENST00000593337 PLEKHH2Q8IVE3 1493 aa28.68■■■□□ 2.18
IRF3-205ENST00000593337 ZNF518AQ6AHZ1 1483 aa28.67■■■□□ 2.18
IRF3-205ENST00000593337 KIAA1107Q9UPP5 1409 aa28.66■■■□□ 2.18
IRF3-205ENST00000593337 CAMSAP2Q08AD1 1489 aa28.65■■■□□ 2.18
IRF3-205ENST00000593337 ARHGEF40Q8TER5 1519 aa28.64■■■□□ 2.18
IRF3-205ENST00000593337 TRAPPC8Q9Y2L5 1435 aa28.64■■■□□ 2.18
IRF3-205ENST00000593337 ZNF777Q9ULD5 760 aaPredicted RBP28.64■■■□□ 2.18
IRF3-205ENST00000593337 MIA2Q96PC5 1412 aa28.62■■■□□ 2.17
IRF3-205ENST00000593337 HECW2Q9P2P5 1572 aa28.61■■■□□ 2.17
IRF3-205ENST00000593337 ZNF644Q9H582 1327 aaPredicted RBP28.6■■■□□ 2.17
IRF3-205ENST00000593337 MAGI2Q86UL8 1455 aa28.59■■■□□ 2.17
IRF3-205ENST00000593337 MBD5Q9P267 1494 aa28.59■■■□□ 2.17
IRF3-205ENST00000593337 ZFYVE16Q7Z3T8 1539 aa28.59■■■□□ 2.17
IRF3-205ENST00000593337 PTPN23Q9H3S7 1636 aa28.58■■■□□ 2.17
IRF3-205ENST00000593337 ARHGEF5Q12774 1597 aa28.56■■■□□ 2.16
IRF3-205ENST00000593337 KIDINS220Q9ULH0 1771 aa28.56■■■□□ 2.16
IRF3-205ENST00000593337 FGD6Q6ZV73 1430 aa28.55■■■□□ 2.16
IRF3-205ENST00000593337 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
IRF3-205ENST00000593337 YEATS2Q9ULM3 1422 aa28.54■■■□□ 2.16
IRF3-205ENST00000593337 INO80Q9ULG1 1556 aaPredicted RBP28.54■■■□□ 2.16
IRF3-205ENST00000593337 MLH3Q9UHC1 1453 aa28.53■■■□□ 2.16
IRF3-205ENST00000593337 HNRNPMP52272 730 aaKnown RBP eCLIP28.53■■■□□ 2.16
IRF3-205ENST00000593337 ABCA6Q8N139 1617 aa28.52■■■□□ 2.16
IRF3-205ENST00000593337 TCOF1Q13428 1488 aaKnown RBP28.52■■■□□ 2.16
IRF3-205ENST00000593337 DIP2CQ9Y2E4 1556 aa28.5■■■□□ 2.15
IRF3-205ENST00000593337 SIGLEC1Q9BZZ2 1709 aa28.5■■■□□ 2.15
IRF3-205ENST00000593337 CCDC141Q6ZP82 1450 aa28.49■■■□□ 2.15
IRF3-205ENST00000593337 ATP7AQ04656 1500 aa28.48■■■□□ 2.15
IRF3-205ENST00000593337 CROCC2H7BZ55 1655 aa28.47■■■□□ 2.15
IRF3-205ENST00000593337 PPARGC1BQ86YN6 1023 aaKnown RBP28.46■■■□□ 2.15
IRF3-205ENST00000593337 REREQ9P2R6 1566 aa28.43■■■□□ 2.14
IRF3-205ENST00000593337 DNMT1P26358 1616 aaKnown RBP28.43■■■□□ 2.14
IRF3-205ENST00000593337 MAST1Q9Y2H9 1570 aa28.41■■■□□ 2.14
IRF3-205ENST00000593337 ATP10AO60312 1499 aa28.41■■■□□ 2.14
IRF3-205ENST00000593337 ADGBQ8N7X0 1667 aa28.4■■■□□ 2.14
IRF3-205ENST00000593337 C9orf84Q5VXU9 1444 aa28.4■■■□□ 2.14
IRF3-205ENST00000593337 SPAG9O60271 1321 aaKnown RBP28.4■■■□□ 2.14
IRF3-205ENST00000593337 RTEL1-TNFRSF6BF6WH68 1400 aa28.38■■■□□ 2.13
IRF3-205ENST00000593337 RSPH4AQ5TD94 716 aa28.38■■■□□ 2.13
IRF3-205ENST00000593337 BCORL1Q5H9F3 1711 aa28.36■■■□□ 2.13
IRF3-205ENST00000593337 SHANK2Q9UPX8 1470 aa28.34■■■□□ 2.13
IRF3-205ENST00000593337 PLXNC1O60486 1568 aa28.33■■■□□ 2.13
IRF3-205ENST00000593337 ABCC5O15440 1437 aa28.33■■■□□ 2.13
IRF3-205ENST00000593337 DAPK1P53355 1430 aa28.33■■■□□ 2.13
IRF3-205ENST00000593337 MYT1LQ9UL68 1186 aa28.32■■■□□ 2.12
IRF3-205ENST00000593337 ADAMTSL3P82987 1691 aa28.3■■■□□ 2.12
IRF3-205ENST00000593337 AGLP35573 1532 aa28.29■■■□□ 2.12
IRF3-205ENST00000593337 RRBP1Q9P2E9 1410 aaKnown RBP28.28■■■□□ 2.12
IRF3-205ENST00000593337 A2MP01023 1474 aa28.26■■■□□ 2.11
IRF3-205ENST00000593337 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.25■■■□□ 2.113e-6■□□□□ 11.3
IRF3-205ENST00000593337 TSPY4P0CV99 314 aa28.25■■■□□ 2.11
IRF3-205ENST00000593337 TSPY10P0CW01 314 aa28.25■■■□□ 2.11
IRF3-205ENST00000593337 KDM4FA0A1W2PPD8 638 aa28.24■■■□□ 2.11
IRF3-205ENST00000593337 FAM50AQ14320 339 aaKnown RBP28.24■■■□□ 2.11
IRF3-205ENST00000593337 MADDQ8WXG6 1647 aa28.21■■■□□ 2.11
IRF3-205ENST00000593337 ARID4BQ4LE39 1312 aaPredicted RBP28.2■■■□□ 2.11
IRF3-205ENST00000593337 FER1L4A9Z1Z3 1794 aa28.19■■■□□ 2.1
IRF3-205ENST00000593337 ADGRL2O95490 1459 aa28.19■■■□□ 2.1
IRF3-205ENST00000593337 DHX29Q7Z478 1369 aaKnown RBP28.16■■■□□ 2.1
IRF3-205ENST00000593337 PTPRKQ15262 1439 aa28.16■■■□□ 2.1
IRF3-205ENST00000593337 EIF2AK4Q9P2K8 1649 aaKnown RBP28.14■■■□□ 2.1
IRF3-205ENST00000593337 RIMS1Q86UR5 1692 aaKnown RBP28.14■■■□□ 2.1
IRF3-205ENST00000593337 DUOX2Q9NRD8 1548 aa28.13■■■□□ 2.09
IRF3-205ENST00000593337 KIF15Q9NS87 1388 aa28.11■■■□□ 2.09
IRF3-205ENST00000593337 NCOA1Q15788 1441 aa28.1■■■□□ 2.09
IRF3-205ENST00000593337 RNF17Q9BXT8 1623 aaKnown RBP28.09■■■□□ 2.09
IRF3-205ENST00000593337 ANKRD30AQ9BXX3 1397 aa28.09■■■□□ 2.09
IRF3-205ENST00000593337 MLECQ14165 292 aa28.07■■■□□ 2.08
IRF3-205ENST00000593337 CHIC2Q9UKJ5 165 aa28.07■■■□□ 2.08
IRF3-205ENST00000593337 ERBINQ96RT1 1412 aa28.05■■■□□ 2.08
IRF3-205ENST00000593337 ROCK1Q13464 1354 aa28.04■■■□□ 2.08
IRF3-205ENST00000593337 MROH1Q8NDA8 1641 aa28.03■■■□□ 2.08
IRF3-205ENST00000593337 PTPRMP28827 1452 aa28.02■■■□□ 2.08
IRF3-205ENST00000593337 RRP7BPQ9NSQ0 103 aa28.02■■■□□ 2.08
IRF3-205ENST00000593337 MROH2AA6NES4 1674 aa28.02■■■□□ 2.08
IRF3-205ENST00000593337 DEPDC5O75140 1603 aa28.01■■■□□ 2.07
IRF3-205ENST00000593337 CLTCQ00610 1675 aaKnown RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms