RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 MS4A4AQ96JQ5 239 aa15.48■□□□□ 0.07
SOX2-OT-219ENST00000593330 BCL11BQ9C0K0 894 aaPredicted RBP15.47■□□□□ 0.07
SOX2-OT-219ENST00000593330 STK24Q9Y6E0 443 aa15.44■□□□□ 0.06
SOX2-OT-219ENST00000593330 VARS2Q5ST30 1063 aaKnown RBP15.41■□□□□ 0.06
SOX2-OT-219ENST00000593330 TMEM92Q6UXU6 159 aa15.41■□□□□ 0.06
SOX2-OT-219ENST00000593330 STK25O00506 426 aa15.39■□□□□ 0.05
SOX2-OT-219ENST00000593330 ECM2O94769 699 aaPredicted RBP15.39■□□□□ 0.05
SOX2-OT-219ENST00000593330 FBXO22Q8NEZ5 403 aa15.37■□□□□ 0.05
SOX2-OT-219ENST00000593330 GPR153Q6NV75 609 aa15.36■□□□□ 0.05
SOX2-OT-219ENST00000593330 ZNF687Q8N1G0 1237 aa15.36■□□□□ 0.05
SOX2-OT-219ENST00000593330 PTGER2P43116 358 aa15.33■□□□□ 0.04
SOX2-OT-219ENST00000593330 MFRPQ9BY79 579 aa15.29■□□□□ 0.04
SOX2-OT-219ENST00000593330 ARSIQ5FYB1 569 aa15.26■□□□□ 0.03
SOX2-OT-219ENST00000593330 RNF166Q96A37 237 aaPredicted RBP15.26■□□□□ 0.03
SOX2-OT-219ENST00000593330 ZNF316A6NFI3 1004 aaPredicted RBP15.23■□□□□ 0.03
SOX2-OT-219ENST00000593330 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
SOX2-OT-219ENST00000593330 TMC2Q8TDI7 906 aa15.22■□□□□ 0.03
SOX2-OT-219ENST00000593330 KIF3CO14782 793 aa15.2■□□□□ 0.02
SOX2-OT-219ENST00000593330 C2orf72A6NCS6 295 aa15.18■□□□□ 0.02
SOX2-OT-219ENST00000593330 SLC34A2O95436 690 aa15.17■□□□□ 0.02
SOX2-OT-219ENST00000593330 PBX2P40425 430 aa15.17■□□□□ 0.02
SOX2-OT-219ENST00000593330 PKD2Q13563 968 aa15.16■□□□□ 0.02
SOX2-OT-219ENST00000593330 RGL2O15211 777 aa15.15■□□□□ 0.02
SOX2-OT-219ENST00000593330 PSDA5PKW4 1024 aaPredicted RBP15.11■□□□□ 0.01
SOX2-OT-219ENST00000593330 ANKRD13DQ6ZTN6 518 aa15.11■□□□□ 0.01
SOX2-OT-219ENST00000593330 LSM11P83369 360 aaKnown RBP eCLIP15.08■□□□□ 0
SOX2-OT-219ENST00000593330 KHSRPQ92945 711 aaKnown RBP eCLIP15.07■□□□□ 0
SOX2-OT-219ENST00000593330 PCDHGA4Q9Y5G9 962 aa15.07■□□□□ 0
SOX2-OT-219ENST00000593330 NUDT7P0C024 238 aa15.06■□□□□ 0
SOX2-OT-219ENST00000593330 LHX6Q9UPM6 363 aa15□□□□□ -0.01
SOX2-OT-219ENST00000593330 RYDENQ9NUL5 291 aaKnown RBP14.99□□□□□ -0.01
SOX2-OT-219ENST00000593330 HS6ST3Q8IZP7 471 aa14.98□□□□□ -0.01
SOX2-OT-219ENST00000593330 TBC1D12O60347 775 aa14.97□□□□□ -0.01
SOX2-OT-219ENST00000593330 PTCD2Q8WV60 388 aaKnown RBP14.94□□□□□ -0.02
SOX2-OT-219ENST00000593330 PPP1R37O75864 691 aa14.93□□□□□ -0.02
SOX2-OT-219ENST00000593330 FOXK1P85037 733 aa14.93□□□□□ -0.02
SOX2-OT-219ENST00000593330 ARHGAP33O14559 1287 aa14.92□□□□□ -0.02
SOX2-OT-219ENST00000593330 GPHNQ9NQX3 736 aaPredicted RBP14.91□□□□□ -0.02
SOX2-OT-219ENST00000593330 KCNH8Q96L42 1107 aa14.88□□□□□ -0.03
SOX2-OT-219ENST00000593330 PLPP6Q8IY26 295 aa14.87□□□□□ -0.03
SOX2-OT-219ENST00000593330 PPP4R3BQ5MIZ7 849 aa14.86□□□□□ -0.03
SOX2-OT-219ENST00000593330 HCSTQ9UBK5 93 aa14.85□□□□□ -0.03
SOX2-OT-219ENST00000593330 TK2O00142 265 aa14.84□□□□□ -0.03
SOX2-OT-219ENST00000593330 AXIN2Q9Y2T1 843 aa14.84□□□□□ -0.03
SOX2-OT-219ENST00000593330 CHGAP10645 457 aaKnown RBP14.83□□□□□ -0.04
SOX2-OT-219ENST00000593330 ADGRD1Q6QNK2 874 aa14.83□□□□□ -0.04
SOX2-OT-219ENST00000593330 DNAJC5Q9H3Z4 198 aa14.81□□□□□ -0.04
SOX2-OT-219ENST00000593330 KDM4FA0A1W2PPD8 638 aa14.8□□□□□ -0.04
SOX2-OT-219ENST00000593330 STAC3Q96MF2 364 aa14.8□□□□□ -0.04
SOX2-OT-219ENST00000593330 POTEEQ6S8J3 1075 aa14.79□□□□□ -0.04
SOX2-OT-219ENST00000593330 DSG2Q14126 1118 aa14.77□□□□□ -0.05
SOX2-OT-219ENST00000593330 PLA2G2EQ9NZK7 142 aa14.69□□□□□ -0.06
SOX2-OT-219ENST00000593330 OXER1Q8TDS5 423 aa14.67□□□□□ -0.06
SOX2-OT-219ENST00000593330 HRO43593 1189 aa14.66□□□□□ -0.06
SOX2-OT-219ENST00000593330 PDE4AP27815 886 aa14.66□□□□□ -0.06
SOX2-OT-219ENST00000593330 PSEN2P49810 448 aa14.66□□□□□ -0.06
SOX2-OT-219ENST00000593330 DMRTA1Q5VZB9 504 aa14.64□□□□□ -0.07
SOX2-OT-219ENST00000593330 KCNK17Q96T54 332 aa14.64□□□□□ -0.07
SOX2-OT-219ENST00000593330 CRISPLD2Q9H0B8 497 aa14.64□□□□□ -0.07
SOX2-OT-219ENST00000593330 PPP1R15BQ5SWA1 713 aa14.63□□□□□ -0.07
SOX2-OT-219ENST00000593330 NKX1-1Q15270 411 aaPredicted RBP14.6□□□□□ -0.07
SOX2-OT-219ENST00000593330 ZNF454Q8N9F8 522 aa14.59□□□□□ -0.07
SOX2-OT-219ENST00000593330 UPF1Q92900 1129 aaKnown RBP eCLIP14.59□□□□□ -0.07
SOX2-OT-219ENST00000593330 SLC4A5Q9BY07 1137 aa14.59□□□□□ -0.07
SOX2-OT-219ENST00000593330 BCL2L12Q9HB09 334 aa14.58□□□□□ -0.08
SOX2-OT-219ENST00000593330 PTPREP23469 700 aa14.56□□□□□ -0.08
SOX2-OT-219ENST00000593330 KCTD12Q96CX2 325 aaKnown RBP14.56□□□□□ -0.08
SOX2-OT-219ENST00000593330 VPS9D1Q9Y2B5 631 aa14.55□□□□□ -0.08
SOX2-OT-219ENST00000593330 FOSBP53539 338 aa14.52□□□□□ -0.09
SOX2-OT-219ENST00000593330 JPH4Q96JJ6 628 aa14.52□□□□□ -0.09
SOX2-OT-219ENST00000593330 DDX27Q96GQ7 796 aaKnown RBP14.5□□□□□ -0.09
SOX2-OT-219ENST00000593330 ANO8Q9HCE9 1232 aaPredicted RBP14.5□□□□□ -0.09
SOX2-OT-219ENST00000593330 GOLGA8CPA6NN73 597 aa14.49□□□□□ -0.09
SOX2-OT-219ENST00000593330 NCKAP5LQ9HCH0 1330 aa14.47□□□□□ -0.09
SOX2-OT-219ENST00000593330 EVI5O60447 810 aa14.47□□□□□ -0.09
SOX2-OT-219ENST00000593330 MAP3K9P80192 1104 aa14.46□□□□□ -0.09
SOX2-OT-219ENST00000593330 ZDHHC16Q969W1 377 aa14.46□□□□□ -0.09
SOX2-OT-219ENST00000593330 LARP6Q9BRS8 491 aaKnown RBP14.46□□□□□ -0.09
SOX2-OT-219ENST00000593330 NBPF3Q9H094 633 aa14.46□□□□□ -0.09
SOX2-OT-219ENST00000593330 GTPBP6O43824 516 aaPredicted RBP14.44□□□□□ -0.1
SOX2-OT-219ENST00000593330 MRPL50Q8N5N7 158 aaKnown RBP14.44□□□□□ -0.1
SOX2-OT-219ENST00000593330 MFSD10Q14728 455 aa14.41□□□□□ -0.1
SOX2-OT-219ENST00000593330 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
SOX2-OT-219ENST00000593330 PTPN5P54829 565 aa14.4□□□□□ -0.1
SOX2-OT-219ENST00000593330 BHMG1C9JSJ3 638 aaPredicted RBP14.39□□□□□ -0.11
SOX2-OT-219ENST00000593330 RGS20O76081 388 aa14.39□□□□□ -0.11
SOX2-OT-219ENST00000593330 IFFO2Q5TF58 517 aa14.39□□□□□ -0.11
SOX2-OT-219ENST00000593330 DCAF8L2P0C7V8 631 aa14.37□□□□□ -0.11
SOX2-OT-219ENST00000593330 THSD4Q6ZMP0 1018 aa14.37□□□□□ -0.11
SOX2-OT-219ENST00000593330 WNT2BQ93097 391 aa14.37□□□□□ -0.11
SOX2-OT-219ENST00000593330 FBXW7Q969H0 707 aa14.36□□□□□ -0.11
SOX2-OT-219ENST00000593330 PPP1R3GB7ZBB8 358 aa14.33□□□□□ -0.12
SOX2-OT-219ENST00000593330 ADAM33Q9BZ11 813 aa14.33□□□□□ -0.12
SOX2-OT-219ENST00000593330 TYW1BQ6NUM6 668 aa14.3□□□□□ -0.12
SOX2-OT-219ENST00000593330 RABGEF1Q9UJ41 708 aa14.29□□□□□ -0.12
SOX2-OT-219ENST00000593330 PHF14O94880 888 aa14.28□□□□□ -0.12
SOX2-OT-219ENST00000593330 ANKK1Q8NFD2 765 aa14.27□□□□□ -0.13
SOX2-OT-219ENST00000593330 LAPTM4BQ86VI4 370 aa14.25□□□□□ -0.13
SOX2-OT-219ENST00000593330 PCDHGA10Q9Y5H3 936 aa14.25□□□□□ -0.13
SOX2-OT-219ENST00000593330 EPAS1Q99814 870 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms