RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TROQ12816 1431 aaPredicted RBP33.52■■■□□ 2.96
TRIM47-207ENST00000593089 POGZQ7Z3K3 1410 aa33.5■■■□□ 2.95
TRIM47-207ENST00000593089 EFCAB2Q5VUJ9 269 aa33.49■■■□□ 2.95
TRIM47-207ENST00000593089 MAGI2Q86UL8 1455 aa33.49■■■□□ 2.95
TRIM47-207ENST00000593089 CLIP1P30622 1438 aa33.48■■■□□ 2.95
TRIM47-207ENST00000593089 RIMS1Q86UR5 1692 aaKnown RBP33.48■■■□□ 2.95
TRIM47-207ENST00000593089 PCF11O94913 1555 aaKnown RBP33.47■■■□□ 2.95
TRIM47-207ENST00000593089 SIGLEC1Q9BZZ2 1709 aa33.47■■■□□ 2.95
TRIM47-207ENST00000593089 ILDR1Q86SU0 546 aaPredicted RBP33.45■■■□□ 2.95
TRIM47-207ENST00000593089 ARHGAP5Q13017 1502 aa33.43■■■□□ 2.94
TRIM47-207ENST00000593089 CASKIN1Q8WXD9 1431 aa33.42■■■□□ 2.94
TRIM47-207ENST00000593089 CCDC18Q5T9S5 1454 aa33.39■■■□□ 2.94
TRIM47-207ENST00000593089 MLECQ14165 292 aa33.36■■■□□ 2.93
TRIM47-207ENST00000593089 CDC42BPBQ9Y5S2 1711 aa33.34■■■□□ 2.93
TRIM47-207ENST00000593089 PLPPR3Q6T4P5 718 aa33.34■■■□□ 2.93
TRIM47-207ENST00000593089 ATP10AO60312 1499 aa33.33■■■□□ 2.93
TRIM47-207ENST00000593089 ZNF518AQ6AHZ1 1483 aa33.33■■■□□ 2.93
TRIM47-207ENST00000593089 C9orf84Q5VXU9 1444 aa33.3■■■□□ 2.92
TRIM47-207ENST00000593089 FER1L4A9Z1Z3 1794 aa33.3■■■□□ 2.92
TRIM47-207ENST00000593089 FYCO1Q9BQS8 1478 aa33.3■■■□□ 2.92
TRIM47-207ENST00000593089 PREX2Q70Z35 1606 aa33.29■■■□□ 2.92
TRIM47-207ENST00000593089 AFAP1Q8N556 730 aa33.29■■■□□ 2.92
TRIM47-207ENST00000593089 LMTK3Q96Q04 1460 aa33.29■■■□□ 2.92
TRIM47-207ENST00000593089 KDM5CP41229 1560 aa33.27■■■□□ 2.92
TRIM47-207ENST00000593089 MYT1LQ9UL68 1186 aa33.26■■■□□ 2.91
TRIM47-207ENST00000593089 CDC42BPAQ5VT25 1732 aa33.21■■■□□ 2.91
TRIM47-207ENST00000593089 ABCC1P33527 1531 aa33.2■■■□□ 2.91
TRIM47-207ENST00000593089 ARHGEF12Q9NZN5 1544 aa33.2■■■□□ 2.91
TRIM47-207ENST00000593089 DIP2CQ9Y2E4 1556 aa33.18■■■□□ 2.9
TRIM47-207ENST00000593089 ITSN2Q9NZM3 1697 aa33.18■■■□□ 2.9
TRIM47-207ENST00000593089 TRAPPC8Q9Y2L5 1435 aa33.16■■■□□ 2.9
TRIM47-207ENST00000593089 ABCA6Q8N139 1617 aa33.15■■■□□ 2.9
TRIM47-207ENST00000593089 HSPA2P54652 639 aa33.14■■■□□ 2.9
TRIM47-207ENST00000593089 MLH3Q9UHC1 1453 aa33.13■■■□□ 2.89
TRIM47-207ENST00000593089 REREQ9P2R6 1566 aa33.09■■■□□ 2.89
TRIM47-207ENST00000593089 ZNF777Q9ULD5 760 aaPredicted RBP33.09■■■□□ 2.89
TRIM47-207ENST00000593089 SAMD9LQ8IVG5 1584 aa33.05■■■□□ 2.88
TRIM47-207ENST00000593089 CEBPAP49715 358 aaPredicted RBP33.05■■■□□ 2.88
TRIM47-207ENST00000593089 GPATCH8Q9UKJ3 1502 aaKnown RBP33.05■■■□□ 2.88
TRIM47-207ENST00000593089 KIDINS220Q9ULH0 1771 aa33.04■■■□□ 2.88
TRIM47-207ENST00000593089 SYCP2Q9BX26 1530 aa33.01■■■□□ 2.87
TRIM47-207ENST00000593089 PREX1Q8TCU6 1659 aa33.01■■■□□ 2.87
TRIM47-207ENST00000593089 MTUS2Q5JR59 1369 aa32.99■■■□□ 2.87
TRIM47-207ENST00000593089 AGLP35573 1532 aa32.98■■■□□ 2.87
TRIM47-207ENST00000593089 CCNB3Q8WWL7 1395 aa32.96■■■□□ 2.87
TRIM47-207ENST00000593089 HNRNPMP52272 730 aaKnown RBP eCLIP32.96■■■□□ 2.87
TRIM47-207ENST00000593089 FBXO41Q8TF61 875 aa32.95■■■□□ 2.87
TRIM47-207ENST00000593089 CFDP1Q9UEE9 299 aaPredicted RBP32.95■■■□□ 2.87
TRIM47-207ENST00000593089 CEP162Q5TB80 1403 aa32.94■■■□□ 2.86
TRIM47-207ENST00000593089 ESF1Q9H501 851 aaKnown RBP32.91■■■□□ 2.86
TRIM47-207ENST00000593089 SPAG9O60271 1321 aaKnown RBP32.91■■■□□ 2.86
TRIM47-207ENST00000593089 C3P01024 1663 aa32.91■■■□□ 2.86
TRIM47-207ENST00000593089 PLEKHH2Q8IVE3 1493 aa32.89■■■□□ 2.86
TRIM47-207ENST00000593089 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
TRIM47-207ENST00000593089 KIAA1107Q9UPP5 1409 aa32.87■■■□□ 2.85
TRIM47-207ENST00000593089 ATP7AQ04656 1500 aa32.86■■■□□ 2.85
TRIM47-207ENST00000593089 UHRF1BP1Q6BDS2 1440 aa32.85■■■□□ 2.85
TRIM47-207ENST00000593089 TIAM1Q13009 1591 aa32.85■■■□□ 2.85
TRIM47-207ENST00000593089 SETD1BQ9UPS6 1966 aaKnown RBP32.84■■■□□ 2.85
TRIM47-207ENST00000593089 SUPT6HQ7KZ85 1726 aaKnown RBP32.84■■■□□ 2.85
TRIM47-207ENST00000593089 INO80Q9ULG1 1556 aaPredicted RBP32.83■■■□□ 2.85
TRIM47-207ENST00000593089 CNTLNQ9NXG0 1405 aa32.79■■■□□ 2.84
TRIM47-207ENST00000593089 ZNF644Q9H582 1327 aaPredicted RBP32.78■■■□□ 2.84
TRIM47-207ENST00000593089 STRCQ7RTU9 1775 aa32.75■■■□□ 2.83
TRIM47-207ENST00000593089 A2MP01023 1474 aa32.74■■■□□ 2.83
TRIM47-207ENST00000593089 PLXNC1O60486 1568 aa32.74■■■□□ 2.83
TRIM47-207ENST00000593089 MROH2AA6NES4 1674 aa32.72■■■□□ 2.83
TRIM47-207ENST00000593089 ADGBQ8N7X0 1667 aa32.69■■■□□ 2.82
TRIM47-207ENST00000593089 MBD5Q9P267 1494 aa32.69■■■□□ 2.82
TRIM47-207ENST00000593089 CERKQ8TCT0 537 aa32.68■■■□□ 2.82
TRIM47-207ENST00000593089 CLTCQ00610 1675 aaKnown RBP32.68■■■□□ 2.82
TRIM47-207ENST00000593089 NCOA2Q15596 1464 aa32.67■■■□□ 2.82
TRIM47-207ENST00000593089 LOC105371045A0A1W2PR82 267 aa32.67■■■□□ 2.82
TRIM47-207ENST00000593089 DMRT2Q9Y5R5 561 aa32.67■■■□□ 2.82
TRIM47-207ENST00000593089 ZMYM3Q14202 1370 aa32.66■■■□□ 2.82
TRIM47-207ENST00000593089 GGT6Q6P531 493 aa32.64■■■□□ 2.82
TRIM47-207ENST00000593089 NPATQ14207 1427 aa32.62■■■□□ 2.81
TRIM47-207ENST00000593089 CAMSAP2Q08AD1 1489 aa32.6■■■□□ 2.81
TRIM47-207ENST00000593089 RTEL1-TNFRSF6BF6WH68 1400 aa32.6■■■□□ 2.81
TRIM47-207ENST00000593089 VPS8Q8N3P4 1428 aa32.59■■■□□ 2.81
TRIM47-207ENST00000593089 CCDC141Q6ZP82 1450 aa32.56■■■□□ 2.8
TRIM47-207ENST00000593089 PTPRTO14522 1441 aa32.54■■■□□ 2.8
TRIM47-207ENST00000593089 NCOA1Q15788 1441 aa32.52■■■□□ 2.8
TRIM47-207ENST00000593089 DHX29Q7Z478 1369 aaKnown RBP32.52■■■□□ 2.8
TRIM47-207ENST00000593089 LRRC9Q6ZRR7 1453 aa32.52■■■□□ 2.8
TRIM47-207ENST00000593089 CAMSAP1Q5T5Y3 1602 aa32.51■■■□□ 2.8
TRIM47-207ENST00000593089 PPP6R1Q9UPN7 881 aa32.5■■■□□ 2.79
TRIM47-207ENST00000593089 MYO3AQ8NEV4 1616 aa32.5■■■□□ 2.79
TRIM47-207ENST00000593089 PTPRKQ15262 1439 aa32.5■■■□□ 2.79
TRIM47-207ENST00000593089 RSPH4AQ5TD94 716 aa32.48■■■□□ 2.79
TRIM47-207ENST00000593089 ZNF142P52746 1687 aaPredicted RBP32.46■■■□□ 2.79
TRIM47-207ENST00000593089 ARHGEF5Q12774 1597 aa32.45■■■□□ 2.79
TRIM47-207ENST00000593089 KIF3BO15066 747 aa32.45■■■□□ 2.79
TRIM47-207ENST00000593089 CEP170BQ9Y4F5 1589 aaPredicted RBP32.43■■■□□ 2.78
TRIM47-207ENST00000593089 KANK4Q5T7N3 995 aaPredicted RBP32.41■■■□□ 2.78
TRIM47-207ENST00000593089 TSPY4P0CV99 314 aa32.4■■■□□ 2.78
TRIM47-207ENST00000593089 TSPY10P0CW01 314 aa32.4■■■□□ 2.78
TRIM47-207ENST00000593089 NCKAP5LQ9HCH0 1330 aa32.39■■■□□ 2.78
TRIM47-207ENST00000593089 MAP3K1Q13233 1512 aa32.39■■■□□ 2.78
TRIM47-207ENST00000593089 LTBP4Q8N2S1 1624 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms