RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 ZNF777Q9ULD5 760 aaPredicted RBP38.76■■■■□ 3.8
LDLRAD4-218ENST00000592991 ABCA9Q8IUA7 1624 aa38.75■■■■□ 3.79
LDLRAD4-218ENST00000592991 CAMSAP2Q08AD1 1489 aa38.74■■■■□ 3.79
LDLRAD4-218ENST00000592991 DNAJC5Q9H3Z4 198 aa38.73■■■■□ 3.79
LDLRAD4-218ENST00000592991 ARHGAP5Q13017 1502 aa38.71■■■■□ 3.79
LDLRAD4-218ENST00000592991 PLCH2O75038 1416 aa38.66■■■■□ 3.78
LDLRAD4-218ENST00000592991 SAMD9LQ8IVG5 1584 aa38.66■■■■□ 3.78
LDLRAD4-218ENST00000592991 PTPRKQ15262 1439 aa38.63■■■■□ 3.77
LDLRAD4-218ENST00000592991 DNMT1P26358 1616 aaKnown RBP38.57■■■■□ 3.77
LDLRAD4-218ENST00000592991 DIP2BQ9P265 1576 aa38.55■■■■□ 3.76
LDLRAD4-218ENST00000592991 DAPK1P53355 1430 aa38.54■■■■□ 3.76
LDLRAD4-218ENST00000592991 ARAP3Q8WWN8 1544 aa38.54■■■■□ 3.76
LDLRAD4-218ENST00000592991 ABCC5O15440 1437 aa38.53■■■■□ 3.76
LDLRAD4-218ENST00000592991 CD109Q6YHK3 1445 aa38.52■■■■□ 3.76
LDLRAD4-218ENST00000592991 EFCAB2Q5VUJ9 269 aa38.5■■■■□ 3.75
LDLRAD4-218ENST00000592991 SYCP2Q9BX26 1530 aa38.5■■■■□ 3.75
LDLRAD4-218ENST00000592991 GLI2P10070 1586 aa38.49■■■■□ 3.75
LDLRAD4-218ENST00000592991 HNRNPMP52272 730 aaKnown RBP eCLIP38.48■■■■□ 3.75
LDLRAD4-218ENST00000592991 CHIC2Q9UKJ5 165 aa38.48■■■■□ 3.75
LDLRAD4-218ENST00000592991 MAP3K4Q9Y6R4 1608 aa38.47■■■■□ 3.75
LDLRAD4-218ENST00000592991 FANCAO15360 1455 aa38.47■■■■□ 3.75
LDLRAD4-218ENST00000592991 CROCC2H7BZ55 1655 aa38.46■■■■□ 3.75
LDLRAD4-218ENST00000592991 FAM69CQ0P6D2 419 aa38.45■■■■□ 3.75
LDLRAD4-218ENST00000592991 MBD5Q9P267 1494 aa38.45■■■■□ 3.75
LDLRAD4-218ENST00000592991 ABCC1P33527 1531 aa38.43■■■■□ 3.74
LDLRAD4-218ENST00000592991 ARHGEF12Q9NZN5 1544 aa38.43■■■■□ 3.74
LDLRAD4-218ENST00000592991 ARHGEF5Q12774 1597 aa38.41■■■■□ 3.74
LDLRAD4-218ENST00000592991 PLEKHH2Q8IVE3 1493 aa38.39■■■■□ 3.74
LDLRAD4-218ENST00000592991 KIF13AQ9H1H9 1805 aa38.39■■■■□ 3.74
LDLRAD4-218ENST00000592991 KIAA1107Q9UPP5 1409 aa38.37■■■■□ 3.73
LDLRAD4-218ENST00000592991 CCDC141Q6ZP82 1450 aa38.35■■■■□ 3.73
LDLRAD4-218ENST00000592991 AKNAQ7Z591 1439 aa38.34■■■■□ 3.73
LDLRAD4-218ENST00000592991 TSPOAP1O95153 1857 aa38.33■■■■□ 3.73
LDLRAD4-218ENST00000592991 RRP7BPQ9NSQ0 103 aa38.33■■■■□ 3.73
LDLRAD4-218ENST00000592991 ADGBQ8N7X0 1667 aa38.31■■■■□ 3.72
LDLRAD4-218ENST00000592991 CFAP74Q9C0B2 1584 aa38.31■■■■□ 3.72
LDLRAD4-218ENST00000592991 ADGRL1O94910 1474 aa38.31■■■■□ 3.72
LDLRAD4-218ENST00000592991 SETD5Q9C0A6 1442 aa38.3■■■■□ 3.72
LDLRAD4-218ENST00000592991 TRAPPC8Q9Y2L5 1435 aa38.3■■■■□ 3.72
LDLRAD4-218ENST00000592991 HFM1A2PYH4 1435 aa38.29■■■■□ 3.72
LDLRAD4-218ENST00000592991 C9orf84Q5VXU9 1444 aa38.29■■■■□ 3.72
LDLRAD4-218ENST00000592991 SHANK2Q9UPX8 1470 aa38.29■■■■□ 3.72
LDLRAD4-218ENST00000592991 RAB3GAP2Q9H2M9 1393 aa38.28■■■■□ 3.72
LDLRAD4-218ENST00000592991 NAIPQ13075 1403 aa38.27■■■■□ 3.72
LDLRAD4-218ENST00000592991 PPRC1Q5VV67 1664 aaKnown RBP38.27■■■■□ 3.72
LDLRAD4-218ENST00000592991 GCC2Q8IWJ2 1684 aa38.26■■■■□ 3.72
LDLRAD4-218ENST00000592991 SCAPERQ9BY12 1400 aa38.25■■■■□ 3.71
LDLRAD4-218ENST00000592991 ROCK1Q13464 1354 aa38.23■■■■□ 3.71
LDLRAD4-218ENST00000592991 TSPY4P0CV99 314 aa38.22■■■■□ 3.71
LDLRAD4-218ENST00000592991 TSPY10P0CW01 314 aa38.22■■■■□ 3.71
LDLRAD4-218ENST00000592991 ADGRL2O95490 1459 aa38.22■■■■□ 3.71
LDLRAD4-218ENST00000592991 RSPH4AQ5TD94 716 aa38.21■■■■□ 3.71
LDLRAD4-218ENST00000592991 NEO1Q92859 1461 aa38.2■■■■□ 3.71
LDLRAD4-218ENST00000592991 NCOA1Q15788 1441 aa38.18■■■■□ 3.7
LDLRAD4-218ENST00000592991 KDM6BO15054 1643 aa38.17■■■■□ 3.7
LDLRAD4-218ENST00000592991 MAST1Q9Y2H9 1570 aa38.17■■■■□ 3.7
LDLRAD4-218ENST00000592991 AFAP1Q8N556 730 aa38.17■■■■□ 3.7
LDLRAD4-218ENST00000592991 ANKRD30AQ9BXX3 1397 aa38.15■■■■□ 3.7
LDLRAD4-218ENST00000592991 POGZQ7Z3K3 1410 aa38.07■■■■□ 3.69
LDLRAD4-218ENST00000592991 TEX14Q8IWB6 1497 aa38.07■■■■□ 3.68
LDLRAD4-218ENST00000592991 ZFYVE16Q7Z3T8 1539 aa38.06■■■■□ 3.68
LDLRAD4-218ENST00000592991 KIF15Q9NS87 1388 aa38.06■■■■□ 3.68
LDLRAD4-218ENST00000592991 SPAG9O60271 1321 aaKnown RBP38.05■■■■□ 3.68
LDLRAD4-218ENST00000592991 CCER1Q8TC90 406 aaPredicted RBP38.05■■■■□ 3.68
LDLRAD4-218ENST00000592991 ZNF518AQ6AHZ1 1483 aa38.04■■■■□ 3.68
LDLRAD4-218ENST00000592991 PLXNC1O60486 1568 aa38.03■■■■□ 3.68
LDLRAD4-218ENST00000592991 INO80Q9ULG1 1556 aaPredicted RBP38.03■■■■□ 3.68
LDLRAD4-218ENST00000592991 DENND4BO75064 1496 aaPredicted RBP38.02■■■■□ 3.68
LDLRAD4-218ENST00000592991 ATP7AQ04656 1500 aa38■■■■□ 3.67
LDLRAD4-218ENST00000592991 RAPGEF3O95398 923 aa38■■■■□ 3.67
LDLRAD4-218ENST00000592991 TRHP20396 242 aaPredicted RBP38■■■■□ 3.67
LDLRAD4-218ENST00000592991 RICTORQ6R327 1708 aa37.99■■■■□ 3.67
LDLRAD4-218ENST00000592991 KDM5CP41229 1560 aa37.99■■■■□ 3.67
LDLRAD4-218ENST00000592991 DHX57Q6P158 1386 aaKnown RBP37.97■■■■□ 3.67
LDLRAD4-218ENST00000592991 HRCP23327 699 aa37.97■■■■□ 3.67
LDLRAD4-218ENST00000592991 RTEL1-TNFRSF6BF6WH68 1400 aa37.96■■■■□ 3.67
LDLRAD4-218ENST00000592991 ANKRD50Q9ULJ7 1429 aa37.95■■■■□ 3.67
LDLRAD4-218ENST00000592991 KIDINS220Q9ULH0 1771 aa37.95■■■■□ 3.67
LDLRAD4-218ENST00000592991 FRMPD1Q5SYB0 1578 aa37.94■■■■□ 3.66
LDLRAD4-218ENST00000592991 MYT1LQ9UL68 1186 aa37.94■■■■□ 3.66
LDLRAD4-218ENST00000592991 HECW2Q9P2P5 1572 aa37.91■■■■□ 3.66
LDLRAD4-218ENST00000592991 DUOX2Q9NRD8 1548 aa37.87■■■■□ 3.65
LDLRAD4-218ENST00000592991 MLH3Q9UHC1 1453 aa37.85■■■■□ 3.65
LDLRAD4-218ENST00000592991 TRIM52Q96A61 297 aa37.84■■■■□ 3.65
LDLRAD4-218ENST00000592991 COL17A1Q9UMD9 1497 aaPredicted RBP37.84■■■■□ 3.65
LDLRAD4-218ENST00000592991 ABCA6Q8N139 1617 aa37.8■■■■□ 3.64
LDLRAD4-218ENST00000592991 ERBINQ96RT1 1412 aa37.76■■■■□ 3.64
LDLRAD4-218ENST00000592991 ZMYM4Q5VZL5 1548 aa37.76■■■■□ 3.64
LDLRAD4-218ENST00000592991 YEATS2Q9ULM3 1422 aa37.73■■■■□ 3.63
LDLRAD4-218ENST00000592991 DIP2CQ9Y2E4 1556 aa37.72■■■■□ 3.63
LDLRAD4-218ENST00000592991 A2MP01023 1474 aa37.68■■■■□ 3.62
LDLRAD4-218ENST00000592991 PZPP20742 1482 aa37.68■■■■□ 3.62
LDLRAD4-218ENST00000592991 DHX29Q7Z478 1369 aaKnown RBP37.67■■■■□ 3.62
LDLRAD4-218ENST00000592991 UNC13BO14795 1591 aa37.67■■■■□ 3.62
LDLRAD4-218ENST00000592991 MPHOSPH9Q99550 1183 aa37.64■■■■□ 3.62
LDLRAD4-218ENST00000592991 NUP155O75694 1391 aa37.64■■■■□ 3.62
LDLRAD4-218ENST00000592991 KDM5DQ9BY66 1539 aa37.61■■■■□ 3.61
LDLRAD4-218ENST00000592991 EIF2AK4Q9P2K8 1649 aaKnown RBP37.61■■■■□ 3.61
LDLRAD4-218ENST00000592991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.6■■■■□ 3.61
LDLRAD4-218ENST00000592991 ACIN1Q9UKV3 1341 aaKnown RBP37.59■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms