RNA–Protein interactions for RNA: ENST00000592783.5

GRN-220, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-220ENST00000592783 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
GRN-220ENST00000592783 TSPOAP1O95153 1857 aa23.66■■□□□ 1.38
GRN-220ENST00000592783 FGD6Q6ZV73 1430 aa23.65■■□□□ 1.38
GRN-220ENST00000592783 TRHP20396 242 aaPredicted RBP23.64■■□□□ 1.37
GRN-220ENST00000592783 CFDP1Q9UEE9 299 aaPredicted RBP23.64■■□□□ 1.37
GRN-220ENST00000592783 PTPN23Q9H3S7 1636 aa23.62■■□□□ 1.37
GRN-220ENST00000592783 EFCAB2Q5VUJ9 269 aa23.6■■□□□ 1.37
GRN-220ENST00000592783 TEX14Q8IWB6 1497 aa23.6■■□□□ 1.37
GRN-220ENST00000592783 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
GRN-220ENST00000592783 FANCAO15360 1455 aa23.59■■□□□ 1.37
GRN-220ENST00000592783 PPRC1Q5VV67 1664 aaKnown RBP23.58■■□□□ 1.37
GRN-220ENST00000592783 PLEKHH2Q8IVE3 1493 aa23.57■■□□□ 1.36
GRN-220ENST00000592783 CAMSAP2Q08AD1 1489 aa23.56■■□□□ 1.36
GRN-220ENST00000592783 TCOF1Q13428 1488 aaKnown RBP23.56■■□□□ 1.36
GRN-220ENST00000592783 SAMD9LQ8IVG5 1584 aa23.56■■□□□ 1.36
GRN-220ENST00000592783 NEO1Q92859 1461 aa23.56■■□□□ 1.36
GRN-220ENST00000592783 ZNF777Q9ULD5 760 aaPredicted RBP23.55■■□□□ 1.36
GRN-220ENST00000592783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.364e-11■■■■■ 30.2
GRN-220ENST00000592783 FAM50AQ14320 339 aaKnown RBP23.51■■□□□ 1.35
GRN-220ENST00000592783 ABCC1P33527 1531 aa23.5■■□□□ 1.35
GRN-220ENST00000592783 AKNAQ7Z591 1439 aa23.5■■□□□ 1.35
GRN-220ENST00000592783 ADGRL1O94910 1474 aa23.49■■□□□ 1.35
GRN-220ENST00000592783 KIAA1107Q9UPP5 1409 aa23.48■■□□□ 1.35
GRN-220ENST00000592783 SYCP2Q9BX26 1530 aa23.48■■□□□ 1.35
GRN-220ENST00000592783 TRIM26Q12899 539 aaPredicted RBP23.47■■□□□ 1.35
GRN-220ENST00000592783 DNMT1P26358 1616 aaKnown RBP23.46■■□□□ 1.35
GRN-220ENST00000592783 ARHGEF5Q12774 1597 aa23.46■■□□□ 1.35
GRN-220ENST00000592783 ZNF644Q9H582 1327 aaPredicted RBP23.46■■□□□ 1.35
GRN-220ENST00000592783 CROCC2H7BZ55 1655 aa23.44■■□□□ 1.34
GRN-220ENST00000592783 RSPH4AQ5TD94 716 aa23.42■■□□□ 1.34
GRN-220ENST00000592783 SCAPERQ9BY12 1400 aa23.42■■□□□ 1.34
GRN-220ENST00000592783 CCDC141Q6ZP82 1450 aa23.41■■□□□ 1.34
GRN-220ENST00000592783 ARHGEF12Q9NZN5 1544 aa23.38■■□□□ 1.33
GRN-220ENST00000592783 DENND4BO75064 1496 aaPredicted RBP23.38■■□□□ 1.33
GRN-220ENST00000592783 MBD5Q9P267 1494 aa23.38■■□□□ 1.33
GRN-220ENST00000592783 HNRNPMP52272 730 aaKnown RBP eCLIP23.38■■□□□ 1.33
GRN-220ENST00000592783 DAPK1P53355 1430 aa23.38■■□□□ 1.33
GRN-220ENST00000592783 ZNF518AQ6AHZ1 1483 aa23.37■■□□□ 1.33
GRN-220ENST00000592783 RICTORQ6R327 1708 aa23.36■■□□□ 1.33
GRN-220ENST00000592783 ADGBQ8N7X0 1667 aa23.36■■□□□ 1.33
GRN-220ENST00000592783 SHANK2Q9UPX8 1470 aa23.36■■□□□ 1.33
GRN-220ENST00000592783 POGZQ7Z3K3 1410 aa23.35■■□□□ 1.33
GRN-220ENST00000592783 ABCC5O15440 1437 aa23.33■■□□□ 1.33
GRN-220ENST00000592783 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
GRN-220ENST00000592783 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
GRN-220ENST00000592783 ITGAEP38570 1179 aa23.33■■□□□ 1.33
GRN-220ENST00000592783 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.32
GRN-220ENST00000592783 MAST1Q9Y2H9 1570 aa23.32■■□□□ 1.32
GRN-220ENST00000592783 KDM5CP41229 1560 aa23.31■■□□□ 1.32
GRN-220ENST00000592783 KDM6BO15054 1643 aa23.31■■□□□ 1.32
GRN-220ENST00000592783 C9orf84Q5VXU9 1444 aa23.3■■□□□ 1.32
GRN-220ENST00000592783 FRMPD1Q5SYB0 1578 aa23.28■■□□□ 1.32
GRN-220ENST00000592783 HECW2Q9P2P5 1572 aa23.28■■□□□ 1.32
GRN-220ENST00000592783 INO80Q9ULG1 1556 aaPredicted RBP23.27■■□□□ 1.32
GRN-220ENST00000592783 ZMYM4Q5VZL5 1548 aa23.27■■□□□ 1.32
GRN-220ENST00000592783 SPAG9O60271 1321 aaKnown RBP23.27■■□□□ 1.32
GRN-220ENST00000592783 AFAP1Q8N556 730 aa23.26■■□□□ 1.31
GRN-220ENST00000592783 ATP7AQ04656 1500 aa23.26■■□□□ 1.31
GRN-220ENST00000592783 RTEL1-TNFRSF6BF6WH68 1400 aa23.25■■□□□ 1.31
GRN-220ENST00000592783 PLXNC1O60486 1568 aa23.25■■□□□ 1.31
GRN-220ENST00000592783 ADGRL2O95490 1459 aa23.24■■□□□ 1.31
GRN-220ENST00000592783 ZFYVE16Q7Z3T8 1539 aa23.24■■□□□ 1.31
GRN-220ENST00000592783 RAPGEF3O95398 923 aa23.24■■□□□ 1.31
GRN-220ENST00000592783 ROCK1Q13464 1354 aa23.24■■□□□ 1.31
GRN-220ENST00000592783 ANKRD30AQ9BXX3 1397 aa23.24■■□□□ 1.31
GRN-220ENST00000592783 PTPRKQ15262 1439 aa23.24■■□□□ 1.31
GRN-220ENST00000592783 KIDINS220Q9ULH0 1771 aa23.23■■□□□ 1.31
GRN-220ENST00000592783 CHIC2Q9UKJ5 165 aa23.23■■□□□ 1.31
GRN-220ENST00000592783 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
GRN-220ENST00000592783 MLH3Q9UHC1 1453 aa23.23■■□□□ 1.31
GRN-220ENST00000592783 MAGI2Q86UL8 1455 aa23.22■■□□□ 1.31
GRN-220ENST00000592783 COL17A1Q9UMD9 1497 aaPredicted RBP23.21■■□□□ 1.31
GRN-220ENST00000592783 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
GRN-220ENST00000592783 PCGF6Q9BYE7 350 aa23.2■■□□□ 1.3
GRN-220ENST00000592783 NCOA1Q15788 1441 aa23.17■■□□□ 1.3
GRN-220ENST00000592783 HFM1A2PYH4 1435 aa23.15■■□□□ 1.3
GRN-220ENST00000592783 ABCA6Q8N139 1617 aa23.15■■□□□ 1.3
GRN-220ENST00000592783 KIF15Q9NS87 1388 aa23.14■■□□□ 1.3
GRN-220ENST00000592783 ARHGEF40Q8TER5 1519 aa23.13■■□□□ 1.29
GRN-220ENST00000592783 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
GRN-220ENST00000592783 DIP2CQ9Y2E4 1556 aa23.13■■□□□ 1.29
GRN-220ENST00000592783 RRP7BPQ9NSQ0 103 aa23.12■■□□□ 1.29
GRN-220ENST00000592783 NAIPQ13075 1403 aa23.09■■□□□ 1.29
GRN-220ENST00000592783 SETD5Q9C0A6 1442 aa23.08■■□□□ 1.29
GRN-220ENST00000592783 YEATS2Q9ULM3 1422 aa23.08■■□□□ 1.28
GRN-220ENST00000592783 ATP10AO60312 1499 aa23.07■■□□□ 1.28
GRN-220ENST00000592783 EIF2AK4Q9P2K8 1649 aaKnown RBP23.07■■□□□ 1.28
GRN-220ENST00000592783 ERBINQ96RT1 1412 aa23.07■■□□□ 1.28
GRN-220ENST00000592783 A2MP01023 1474 aa23.06■■□□□ 1.28
GRN-220ENST00000592783 ANKRD50Q9ULJ7 1429 aa23.06■■□□□ 1.28
GRN-220ENST00000592783 REREQ9P2R6 1566 aa23.06■■□□□ 1.28
GRN-220ENST00000592783 DHX29Q7Z478 1369 aaKnown RBP23.03■■□□□ 1.28
GRN-220ENST00000592783 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
GRN-220ENST00000592783 BCORL1Q5H9F3 1711 aa23.01■■□□□ 1.27
GRN-220ENST00000592783 RAB3GAP2Q9H2M9 1393 aa23■■□□□ 1.27
GRN-220ENST00000592783 HRCP23327 699 aa22.97■■□□□ 1.27
GRN-220ENST00000592783 AGLP35573 1532 aa22.97■■□□□ 1.27
GRN-220ENST00000592783 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
GRN-220ENST00000592783 RNF17Q9BXT8 1623 aaKnown RBP22.95■■□□□ 1.26
GRN-220ENST00000592783 UNC13BO14795 1591 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms