RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-228ENST00000592621 GPATCH8Q9UKJ3 1502 aaKnown RBP18.43■□□□□ 0.54
RANBP3-228ENST00000592621 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
RANBP3-228ENST00000592621 ARHGAP5Q13017 1502 aa18.4■□□□□ 0.54
RANBP3-228ENST00000592621 NCOA2Q15596 1464 aa18.39■□□□□ 0.54
RANBP3-228ENST00000592621 EFCAB2Q5VUJ9 269 aa18.39■□□□□ 0.53
RANBP3-228ENST00000592621 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
RANBP3-228ENST00000592621 CCNB3Q8WWL7 1395 aa18.37■□□□□ 0.53
RANBP3-228ENST00000592621 ADGRL1O94910 1474 aa18.36■□□□□ 0.53
RANBP3-228ENST00000592621 DENND4BO75064 1496 aaPredicted RBP18.35■□□□□ 0.53
RANBP3-228ENST00000592621 APLP2Q06481 763 aa18.35■□□□□ 0.53
RANBP3-228ENST00000592621 RICTORQ6R327 1708 aa18.35■□□□□ 0.53
RANBP3-228ENST00000592621 ITSN2Q9NZM3 1697 aa18.34■□□□□ 0.53
RANBP3-228ENST00000592621 SAMD9LQ8IVG5 1584 aa18.34■□□□□ 0.53
RANBP3-228ENST00000592621 ABCC1P33527 1531 aa18.33■□□□□ 0.53
RANBP3-228ENST00000592621 SCAPERQ9BY12 1400 aa18.33■□□□□ 0.53
RANBP3-228ENST00000592621 RAPGEF3O95398 923 aa18.33■□□□□ 0.52
RANBP3-228ENST00000592621 ARHGEF12Q9NZN5 1544 aa18.32■□□□□ 0.52
RANBP3-228ENST00000592621 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
RANBP3-228ENST00000592621 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
RANBP3-228ENST00000592621 ZMYM4Q5VZL5 1548 aa18.29■□□□□ 0.52
RANBP3-228ENST00000592621 KDM5CP41229 1560 aa18.27■□□□□ 0.52
RANBP3-228ENST00000592621 KIAA1107Q9UPP5 1409 aa18.27■□□□□ 0.52
RANBP3-228ENST00000592621 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
RANBP3-228ENST00000592621 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
RANBP3-228ENST00000592621 SYCP2Q9BX26 1530 aa18.26■□□□□ 0.51
RANBP3-228ENST00000592621 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
RANBP3-228ENST00000592621 TRAPPC8Q9Y2L5 1435 aa18.25■□□□□ 0.51
RANBP3-228ENST00000592621 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
RANBP3-228ENST00000592621 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
RANBP3-228ENST00000592621 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
RANBP3-228ENST00000592621 MAGI2Q86UL8 1455 aa18.23■□□□□ 0.51
RANBP3-228ENST00000592621 MBD5Q9P267 1494 aa18.23■□□□□ 0.51
RANBP3-228ENST00000592621 CAMSAP2Q08AD1 1489 aa18.22■□□□□ 0.51
RANBP3-228ENST00000592621 AFAP1Q8N556 730 aa18.22■□□□□ 0.51
RANBP3-228ENST00000592621 ARHGEF40Q8TER5 1519 aa18.22■□□□□ 0.51
RANBP3-228ENST00000592621 HNRNPMP52272 730 aaKnown RBP eCLIP18.2■□□□□ 0.57e-7■■■□□ 15.5
RANBP3-228ENST00000592621 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
RANBP3-228ENST00000592621 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
RANBP3-228ENST00000592621 ZFYVE16Q7Z3T8 1539 aa18.19■□□□□ 0.5
RANBP3-228ENST00000592621 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
RANBP3-228ENST00000592621 FGD6Q6ZV73 1430 aa18.17■□□□□ 0.5
RANBP3-228ENST00000592621 ARHGEF5Q12774 1597 aa18.16■□□□□ 0.5
RANBP3-228ENST00000592621 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
RANBP3-228ENST00000592621 KIDINS220Q9ULH0 1771 aa18.15■□□□□ 0.5
RANBP3-228ENST00000592621 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
RANBP3-228ENST00000592621 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.49
RANBP3-228ENST00000592621 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
RANBP3-228ENST00000592621 DIP2CQ9Y2E4 1556 aa18.13■□□□□ 0.49
RANBP3-228ENST00000592621 ABCA6Q8N139 1617 aa18.13■□□□□ 0.49
RANBP3-228ENST00000592621 SIGLEC1Q9BZZ2 1709 aa18.12■□□□□ 0.49
RANBP3-228ENST00000592621 PPARGC1BQ86YN6 1023 aaKnown RBP18.12■□□□□ 0.49
RANBP3-228ENST00000592621 RSPH4AQ5TD94 716 aa18.11■□□□□ 0.49
RANBP3-228ENST00000592621 ATP10AO60312 1499 aa18.11■□□□□ 0.49
RANBP3-228ENST00000592621 ATP7AQ04656 1500 aa18.11■□□□□ 0.49
RANBP3-228ENST00000592621 REREQ9P2R6 1566 aa18.1■□□□□ 0.49
RANBP3-228ENST00000592621 SPAG9O60271 1321 aaKnown RBP18.1■□□□□ 0.49
RANBP3-228ENST00000592621 RTEL1-TNFRSF6BF6WH68 1400 aa18.09■□□□□ 0.49
RANBP3-228ENST00000592621 C9orf84Q5VXU9 1444 aa18.09■□□□□ 0.49
RANBP3-228ENST00000592621 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
RANBP3-228ENST00000592621 KDM4FA0A1W2PPD8 638 aa18.06■□□□□ 0.48
RANBP3-228ENST00000592621 ABCC5O15440 1437 aa18.06■□□□□ 0.48
RANBP3-228ENST00000592621 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
RANBP3-228ENST00000592621 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
RANBP3-228ENST00000592621 MYT1LQ9UL68 1186 aa18.04■□□□□ 0.48
RANBP3-228ENST00000592621 DAPK1P53355 1430 aa18.04■□□□□ 0.48
RANBP3-228ENST00000592621 PLXNC1O60486 1568 aa18.04■□□□□ 0.48
RANBP3-228ENST00000592621 BCORL1Q5H9F3 1711 aa18.03■□□□□ 0.48
RANBP3-228ENST00000592621 SHANK2Q9UPX8 1470 aa18.03■□□□□ 0.48
RANBP3-228ENST00000592621 AGLP35573 1532 aa18.03■□□□□ 0.48
RANBP3-228ENST00000592621 TSPY4P0CV99 314 aa18.01■□□□□ 0.47
RANBP3-228ENST00000592621 TSPY10P0CW01 314 aa18.01■□□□□ 0.47
RANBP3-228ENST00000592621 ADAMTSL3P82987 1691 aa18.01■□□□□ 0.47
RANBP3-228ENST00000592621 ADGBQ8N7X0 1667 aa18.01■□□□□ 0.47
RANBP3-228ENST00000592621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.01■□□□□ 0.47
RANBP3-228ENST00000592621 A2MP01023 1474 aa18.01■□□□□ 0.47
RANBP3-228ENST00000592621 RRBP1Q9P2E9 1410 aaKnown RBP18■□□□□ 0.47
RANBP3-228ENST00000592621 ARID4BQ4LE39 1312 aaPredicted RBP17.98■□□□□ 0.47
RANBP3-228ENST00000592621 DHX29Q7Z478 1369 aaKnown RBP17.97■□□□□ 0.47
RANBP3-228ENST00000592621 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
RANBP3-228ENST00000592621 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
RANBP3-228ENST00000592621 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
RANBP3-228ENST00000592621 MADDQ8WXG6 1647 aa17.94■□□□□ 0.46
RANBP3-228ENST00000592621 NCOA1Q15788 1441 aa17.91■□□□□ 0.46
RANBP3-228ENST00000592621 DUOX2Q9NRD8 1548 aa17.9■□□□□ 0.46
RANBP3-228ENST00000592621 MLECQ14165 292 aa17.9■□□□□ 0.46
RANBP3-228ENST00000592621 KIF15Q9NS87 1388 aa17.9■□□□□ 0.46
RANBP3-228ENST00000592621 CHIC2Q9UKJ5 165 aa17.89■□□□□ 0.45
RANBP3-228ENST00000592621 ANKRD30AQ9BXX3 1397 aa17.89■□□□□ 0.45
RANBP3-228ENST00000592621 FER1L4A9Z1Z3 1794 aa17.89■□□□□ 0.45
RANBP3-228ENST00000592621 EIF2AK4Q9P2K8 1649 aaKnown RBP17.88■□□□□ 0.45
RANBP3-228ENST00000592621 PTPRMP28827 1452 aa17.88■□□□□ 0.45
RANBP3-228ENST00000592621 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
RANBP3-228ENST00000592621 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
RANBP3-228ENST00000592621 ROCK1Q13464 1354 aa17.86■□□□□ 0.45
RANBP3-228ENST00000592621 ERBINQ96RT1 1412 aa17.86■□□□□ 0.45
RANBP3-228ENST00000592621 RNF17Q9BXT8 1623 aaKnown RBP17.85■□□□□ 0.45
RANBP3-228ENST00000592621 KIF3BO15066 747 aa17.84■□□□□ 0.45
RANBP3-228ENST00000592621 MROH1Q8NDA8 1641 aa17.83■□□□□ 0.44
RANBP3-228ENST00000592621 GGT6Q6P531 493 aa17.82■□□□□ 0.44
RANBP3-228ENST00000592621 ITGAEP38570 1179 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms