RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 NCOA2Q15596 1464 aa32.38■■■□□ 2.77
DNMT1-227ENST00000592342 AKNAQ7Z591 1439 aa32.37■■■□□ 2.77
DNMT1-227ENST00000592342 PREX2Q70Z35 1606 aa32.35■■■□□ 2.77
DNMT1-227ENST00000592342 GPATCH8Q9UKJ3 1502 aaKnown RBP32.35■■■□□ 2.77
DNMT1-227ENST00000592342 CFDP1Q9UEE9 299 aaPredicted RBP32.33■■■□□ 2.77
DNMT1-227ENST00000592342 COL17A1Q9UMD9 1497 aaPredicted RBP32.33■■■□□ 2.77
DNMT1-227ENST00000592342 CDC42BPAQ5VT25 1732 aa32.32■■■□□ 2.76
DNMT1-227ENST00000592342 ZNF777Q9ULD5 760 aaPredicted RBP32.31■■■□□ 2.76
DNMT1-227ENST00000592342 CDC42BPBQ9Y5S2 1711 aa32.31■■■□□ 2.76
DNMT1-227ENST00000592342 ADGRL1O94910 1474 aa32.29■■■□□ 2.76
DNMT1-227ENST00000592342 ITSN2Q9NZM3 1697 aa32.27■■■□□ 2.76
DNMT1-227ENST00000592342 SCAPERQ9BY12 1400 aa32.26■■■□□ 2.75
DNMT1-227ENST00000592342 DENND4BO75064 1496 aaPredicted RBP32.25■■■□□ 2.75
DNMT1-227ENST00000592342 RAPGEF3O95398 923 aa32.24■■■□□ 2.75
DNMT1-227ENST00000592342 PPARGC1BQ86YN6 1023 aaKnown RBP32.17■■■□□ 2.74
DNMT1-227ENST00000592342 MYOM3Q5VTT5 1437 aa32.16■■■□□ 2.74
DNMT1-227ENST00000592342 SAMD9LQ8IVG5 1584 aa32.15■■■□□ 2.74
DNMT1-227ENST00000592342 PLEKHH2Q8IVE3 1493 aa32.14■■■□□ 2.74
DNMT1-227ENST00000592342 ABCC1P33527 1531 aa32.14■■■□□ 2.74
DNMT1-227ENST00000592342 POGZQ7Z3K3 1410 aa32.13■■■□□ 2.73
DNMT1-227ENST00000592342 ZNF644Q9H582 1327 aaPredicted RBP32.11■■■□□ 2.73
DNMT1-227ENST00000592342 FRMPD1Q5SYB0 1578 aa32.1■■■□□ 2.73
DNMT1-227ENST00000592342 HNRNPMP52272 730 aaKnown RBP eCLIP32.09■■■□□ 2.73
DNMT1-227ENST00000592342 ZNF518AQ6AHZ1 1483 aa32.09■■■□□ 2.73
DNMT1-227ENST00000592342 RICTORQ6R327 1708 aa32.09■■■□□ 2.73
DNMT1-227ENST00000592342 MIA2Q96PC5 1412 aa32.09■■■□□ 2.73
DNMT1-227ENST00000592342 KIAA1107Q9UPP5 1409 aa32.09■■■□□ 2.73
DNMT1-227ENST00000592342 SYCP2Q9BX26 1530 aa32.08■■■□□ 2.73
DNMT1-227ENST00000592342 ARHGEF12Q9NZN5 1544 aa32.08■■■□□ 2.73
DNMT1-227ENST00000592342 AFAP1Q8N556 730 aa32.07■■■□□ 2.72
DNMT1-227ENST00000592342 MYT1LQ9UL68 1186 aa32.06■■■□□ 2.72
DNMT1-227ENST00000592342 CAMSAP2Q08AD1 1489 aa32.05■■■□□ 2.72
DNMT1-227ENST00000592342 TRAPPC8Q9Y2L5 1435 aa32.05■■■□□ 2.72
DNMT1-227ENST00000592342 ZMYM4Q5VZL5 1548 aa32■■■□□ 2.71
DNMT1-227ENST00000592342 FGD6Q6ZV73 1430 aa32■■■□□ 2.71
DNMT1-227ENST00000592342 MAGI2Q86UL8 1455 aa31.97■■■□□ 2.71
DNMT1-227ENST00000592342 KDM5CP41229 1560 aa31.97■■■□□ 2.71
DNMT1-227ENST00000592342 RSPH4AQ5TD94 716 aa31.96■■■□□ 2.71
DNMT1-227ENST00000592342 MBD5Q9P267 1494 aa31.95■■■□□ 2.7
DNMT1-227ENST00000592342 ZFYVE16Q7Z3T8 1539 aa31.95■■■□□ 2.7
DNMT1-227ENST00000592342 PTPN23Q9H3S7 1636 aa31.94■■■□□ 2.7
DNMT1-227ENST00000592342 SPAG9O60271 1321 aaKnown RBP31.94■■■□□ 2.7
DNMT1-227ENST00000592342 CCDC141Q6ZP82 1450 aa31.91■■■□□ 2.7
DNMT1-227ENST00000592342 HECW2Q9P2P5 1572 aa31.91■■■□□ 2.7
DNMT1-227ENST00000592342 YEATS2Q9ULM3 1422 aa31.91■■■□□ 2.7
DNMT1-227ENST00000592342 MLH3Q9UHC1 1453 aa31.91■■■□□ 2.7
DNMT1-227ENST00000592342 ARHGEF40Q8TER5 1519 aa31.9■■■□□ 2.7
DNMT1-227ENST00000592342 FAM50AQ14320 339 aaKnown RBP31.89■■■□□ 2.7
DNMT1-227ENST00000592342 TCOF1Q13428 1488 aaKnown RBP31.88■■■□□ 2.69
DNMT1-227ENST00000592342 TSPY4P0CV99 314 aa31.87■■■□□ 2.69
DNMT1-227ENST00000592342 TSPY10P0CW01 314 aa31.87■■■□□ 2.69
DNMT1-227ENST00000592342 ARHGEF5Q12774 1597 aa31.86■■■□□ 2.69
DNMT1-227ENST00000592342 ARID4BQ4LE39 1312 aaPredicted RBP31.81■■■□□ 2.68
DNMT1-227ENST00000592342 ATP7AQ04656 1500 aa31.81■■■□□ 2.68
DNMT1-227ENST00000592342 ATP10AO60312 1499 aa31.81■■■□□ 2.68
DNMT1-227ENST00000592342 KIDINS220Q9ULH0 1771 aa31.79■■■□□ 2.68
DNMT1-227ENST00000592342 RTEL1-TNFRSF6BF6WH68 1400 aa31.78■■■□□ 2.68
DNMT1-227ENST00000592342 C9orf84Q5VXU9 1444 aa31.78■■■□□ 2.68
DNMT1-227ENST00000592342 INO80Q9ULG1 1556 aaPredicted RBP31.77■■■□□ 2.68
DNMT1-227ENST00000592342 DIP2CQ9Y2E4 1556 aa31.77■■■□□ 2.68
DNMT1-227ENST00000592342 ABCA6Q8N139 1617 aa31.76■■■□□ 2.67
DNMT1-227ENST00000592342 DAPK1P53355 1430 aa31.75■■■□□ 2.67
DNMT1-227ENST00000592342 ABCC5O15440 1437 aa31.74■■■□□ 2.67
DNMT1-227ENST00000592342 DNMT1P26358 1616 aaKnown RBP31.72■■■□□ 2.67
DNMT1-227ENST00000592342 MAST1Q9Y2H9 1570 aa31.68■■■□□ 2.66
DNMT1-227ENST00000592342 RRBP1Q9P2E9 1410 aaKnown RBP31.68■■■□□ 2.66
DNMT1-227ENST00000592342 SHANK2Q9UPX8 1470 aa31.68■■■□□ 2.66
DNMT1-227ENST00000592342 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.67■■■□□ 2.66
DNMT1-227ENST00000592342 CHIC2Q9UKJ5 165 aa31.66■■■□□ 2.66
DNMT1-227ENST00000592342 REREQ9P2R6 1566 aa31.65■■■□□ 2.66
DNMT1-227ENST00000592342 CROCC2H7BZ55 1655 aa31.65■■■□□ 2.66
DNMT1-227ENST00000592342 A2MP01023 1474 aa31.65■■■□□ 2.66
DNMT1-227ENST00000592342 ITGAEP38570 1179 aa31.64■■■□□ 2.66
DNMT1-227ENST00000592342 MLECQ14165 292 aa31.63■■■□□ 2.65
DNMT1-227ENST00000592342 ADGBQ8N7X0 1667 aa31.62■■■□□ 2.65
DNMT1-227ENST00000592342 SIGLEC1Q9BZZ2 1709 aa31.59■■■□□ 2.65
DNMT1-227ENST00000592342 DHX29Q7Z478 1369 aaKnown RBP31.58■■■□□ 2.65
DNMT1-227ENST00000592342 ANKRD30AQ9BXX3 1397 aa31.58■■■□□ 2.65
DNMT1-227ENST00000592342 RRP7BPQ9NSQ0 103 aa31.57■■■□□ 2.64
DNMT1-227ENST00000592342 AGLP35573 1532 aa31.57■■■□□ 2.64
DNMT1-227ENST00000592342 PLXNC1O60486 1568 aa31.56■■■□□ 2.64
DNMT1-227ENST00000592342 KDM4FA0A1W2PPD8 638 aa31.56■■■□□ 2.64
DNMT1-227ENST00000592342 BCORL1Q5H9F3 1711 aa31.55■■■□□ 2.64
DNMT1-227ENST00000592342 KIF15Q9NS87 1388 aa31.54■■■□□ 2.64
DNMT1-227ENST00000592342 PTPRKQ15262 1439 aa31.51■■■□□ 2.64
DNMT1-227ENST00000592342 NCOA1Q15788 1441 aa31.49■■■□□ 2.63
DNMT1-227ENST00000592342 ADGRL2O95490 1459 aa31.49■■■□□ 2.63
DNMT1-227ENST00000592342 KIF3BO15066 747 aa31.49■■■□□ 2.63
DNMT1-227ENST00000592342 DUOX2Q9NRD8 1548 aa31.49■■■□□ 2.63
DNMT1-227ENST00000592342 GGT6Q6P531 493 aa31.47■■■□□ 2.63
DNMT1-227ENST00000592342 ESF1Q9H501 851 aaKnown RBP31.46■■■□□ 2.63
DNMT1-227ENST00000592342 ADAMTSL3P82987 1691 aa31.45■■■□□ 2.63
DNMT1-227ENST00000592342 ROCK1Q13464 1354 aa31.43■■■□□ 2.62
DNMT1-227ENST00000592342 MADDQ8WXG6 1647 aa31.42■■■□□ 2.62
DNMT1-227ENST00000592342 ERBINQ96RT1 1412 aa31.41■■■□□ 2.62
DNMT1-227ENST00000592342 AEBP2Q6ZN18 517 aaPredicted RBP31.41■■■□□ 2.62
DNMT1-227ENST00000592342 EIF2AK4Q9P2K8 1649 aaKnown RBP31.37■■■□□ 2.61
DNMT1-227ENST00000592342 FER1L4A9Z1Z3 1794 aa31.36■■■□□ 2.61
DNMT1-227ENST00000592342 ANKRD50Q9ULJ7 1429 aa31.34■■■□□ 2.61
DNMT1-227ENST00000592342 PPP6R1Q9UPN7 881 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms