RNA–Protein interactions for RNA: ENST00000592113.5

PTBP1-217, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-217ENST00000592113 PLCH2O75038 1416 aa34.51■■■■□ 3.11
PTBP1-217ENST00000592113 CFAP74Q9C0B2 1584 aa34.5■■■■□ 3.11
PTBP1-217ENST00000592113 PTPN23Q9H3S7 1636 aa34.5■■■■□ 3.11
PTBP1-217ENST00000592113 CFDP1Q9UEE9 299 aaPredicted RBP34.49■■■■□ 3.11
PTBP1-217ENST00000592113 RRBP1Q9P2E9 1410 aaKnown RBP34.47■■■■□ 3.11
PTBP1-217ENST00000592113 TSPOAP1O95153 1857 aa34.44■■■■□ 3.1
PTBP1-217ENST00000592113 FANCAO15360 1455 aa34.41■■■■□ 3.1
PTBP1-217ENST00000592113 CAMSAP2Q08AD1 1489 aa34.4■■■■□ 3.1
PTBP1-217ENST00000592113 TCOF1Q13428 1488 aaKnown RBP34.39■■■■□ 3.1
PTBP1-217ENST00000592113 SAMD9LQ8IVG5 1584 aa34.38■■■■□ 3.09
PTBP1-217ENST00000592113 EFCAB2Q5VUJ9 269 aa34.38■■■■□ 3.09
PTBP1-217ENST00000592113 TEX14Q8IWB6 1497 aa34.38■■■■□ 3.09
PTBP1-217ENST00000592113 ZNF777Q9ULD5 760 aaPredicted RBP34.37■■■■□ 3.09
PTBP1-217ENST00000592113 PLEKHH2Q8IVE3 1493 aa34.36■■■■□ 3.09
PTBP1-217ENST00000592113 TRHP20396 242 aaPredicted RBP34.35■■■■□ 3.09
PTBP1-217ENST00000592113 PPRC1Q5VV67 1664 aaKnown RBP34.35■■■■□ 3.09
PTBP1-217ENST00000592113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.34■■■■□ 3.092e-9■■■□□ 18.7
PTBP1-217ENST00000592113 FAM50AQ14320 339 aaKnown RBP34.33■■■■□ 3.09
PTBP1-217ENST00000592113 NEO1Q92859 1461 aa34.32■■■■□ 3.08
PTBP1-217ENST00000592113 TRIM26Q12899 539 aaPredicted RBP34.32■■■■□ 3.08
PTBP1-217ENST00000592113 ABCC1P33527 1531 aa34.31■■■■□ 3.08
PTBP1-217ENST00000592113 SYCP2Q9BX26 1530 aa34.27■■■■□ 3.08
PTBP1-217ENST00000592113 ADGRL1O94910 1474 aa34.26■■■■□ 3.07
PTBP1-217ENST00000592113 DNMT1P26358 1616 aaKnown RBP34.25■■■■□ 3.07
PTBP1-217ENST00000592113 AKNAQ7Z591 1439 aa34.25■■■■□ 3.07
PTBP1-217ENST00000592113 ZNF644Q9H582 1327 aaPredicted RBP34.24■■■■□ 3.07
PTBP1-217ENST00000592113 KIAA1107Q9UPP5 1409 aa34.24■■■■□ 3.07
PTBP1-217ENST00000592113 ARHGEF5Q12774 1597 aa34.23■■■■□ 3.07
PTBP1-217ENST00000592113 CROCC2H7BZ55 1655 aa34.21■■■■□ 3.07
PTBP1-217ENST00000592113 CCDC141Q6ZP82 1450 aa34.16■■■■□ 3.06
PTBP1-217ENST00000592113 DAPK1P53355 1430 aa34.14■■■■□ 3.06
PTBP1-217ENST00000592113 SCAPERQ9BY12 1400 aa34.13■■■■□ 3.05
PTBP1-217ENST00000592113 MBD5Q9P267 1494 aa34.13■■■■□ 3.05
PTBP1-217ENST00000592113 RSPH4AQ5TD94 716 aa34.12■■■■□ 3.05
PTBP1-217ENST00000592113 ARHGEF12Q9NZN5 1544 aa34.12■■■■□ 3.05
PTBP1-217ENST00000592113 HNRNPMP52272 730 aaKnown RBP eCLIP34.1■■■■□ 3.057e-7■■□□□ 11.7
PTBP1-217ENST00000592113 ITGAEP38570 1179 aa34.09■■■■□ 3.05
PTBP1-217ENST00000592113 ZNF518AQ6AHZ1 1483 aa34.09■■■■□ 3.05
PTBP1-217ENST00000592113 SHANK2Q9UPX8 1470 aa34.09■■■■□ 3.05
PTBP1-217ENST00000592113 ADGBQ8N7X0 1667 aa34.09■■■■□ 3.05
PTBP1-217ENST00000592113 DENND4BO75064 1496 aaPredicted RBP34.08■■■■□ 3.05
PTBP1-217ENST00000592113 ABCC5O15440 1437 aa34.07■■■■□ 3.04
PTBP1-217ENST00000592113 POGZQ7Z3K3 1410 aa34.07■■■■□ 3.04
PTBP1-217ENST00000592113 RICTORQ6R327 1708 aa34.06■■■■□ 3.04
PTBP1-217ENST00000592113 MAST1Q9Y2H9 1570 aa34.03■■■■□ 3.04
PTBP1-217ENST00000592113 TRAPPC8Q9Y2L5 1435 aa34.03■■■■□ 3.04
PTBP1-217ENST00000592113 TSPY4P0CV99 314 aa34.02■■■■□ 3.04
PTBP1-217ENST00000592113 TSPY10P0CW01 314 aa34.02■■■■□ 3.04
PTBP1-217ENST00000592113 KDM5CP41229 1560 aa34.01■■■■□ 3.03
PTBP1-217ENST00000592113 C9orf84Q5VXU9 1444 aa34■■■■□ 3.03
PTBP1-217ENST00000592113 PCGF6Q9BYE7 350 aa33.99■■■■□ 3.03
PTBP1-217ENST00000592113 FRMPD1Q5SYB0 1578 aa33.96■■■■□ 3.03
PTBP1-217ENST00000592113 HECW2Q9P2P5 1572 aa33.96■■■■□ 3.03
PTBP1-217ENST00000592113 KDM6BO15054 1643 aa33.96■■■■□ 3.03
PTBP1-217ENST00000592113 INO80Q9ULG1 1556 aaPredicted RBP33.96■■■■□ 3.03
PTBP1-217ENST00000592113 PTPRKQ15262 1439 aa33.95■■■■□ 3.02
PTBP1-217ENST00000592113 ZFYVE16Q7Z3T8 1539 aa33.94■■■■□ 3.02
PTBP1-217ENST00000592113 ATP7AQ04656 1500 aa33.93■■■■□ 3.02
PTBP1-217ENST00000592113 ADGRL2O95490 1459 aa33.92■■■■□ 3.02
PTBP1-217ENST00000592113 PLXNC1O60486 1568 aa33.92■■■■□ 3.02
PTBP1-217ENST00000592113 AFAP1Q8N556 730 aa33.92■■■■□ 3.02
PTBP1-217ENST00000592113 SPAG9O60271 1321 aaKnown RBP33.92■■■■□ 3.02
PTBP1-217ENST00000592113 ZMYM4Q5VZL5 1548 aa33.92■■■■□ 3.02
PTBP1-217ENST00000592113 CHIC2Q9UKJ5 165 aa33.9■■■■□ 3.02
PTBP1-217ENST00000592113 ROCK1Q13464 1354 aa33.9■■■■□ 3.02
PTBP1-217ENST00000592113 RTEL1-TNFRSF6BF6WH68 1400 aa33.9■■■■□ 3.02
PTBP1-217ENST00000592113 ANKRD30AQ9BXX3 1397 aa33.89■■■■□ 3.02
PTBP1-217ENST00000592113 GCC2Q8IWJ2 1684 aa33.89■■■■□ 3.02
PTBP1-217ENST00000592113 RAPGEF3O95398 923 aa33.89■■■■□ 3.02
PTBP1-217ENST00000592113 MYT1LQ9UL68 1186 aa33.87■■■■□ 3.01
PTBP1-217ENST00000592113 MLH3Q9UHC1 1453 aa33.87■■■■□ 3.01
PTBP1-217ENST00000592113 KIDINS220Q9ULH0 1771 aa33.87■■■■□ 3.01
PTBP1-217ENST00000592113 MAGI2Q86UL8 1455 aa33.82■■■■□ 3
PTBP1-217ENST00000592113 COL17A1Q9UMD9 1497 aaPredicted RBP33.82■■■■□ 3
PTBP1-217ENST00000592113 HFM1A2PYH4 1435 aa33.82■■■■□ 3
PTBP1-217ENST00000592113 NCOA1Q15788 1441 aa33.82■■■■□ 3
PTBP1-217ENST00000592113 KIF15Q9NS87 1388 aa33.78■■■■□ 3
PTBP1-217ENST00000592113 ABCA6Q8N139 1617 aa33.76■■■■□ 3
PTBP1-217ENST00000592113 DUOX2Q9NRD8 1548 aa33.76■■■□□ 2.99
PTBP1-217ENST00000592113 RRP7BPQ9NSQ0 103 aa33.75■■■□□ 2.99
PTBP1-217ENST00000592113 NAIPQ13075 1403 aa33.74■■■□□ 2.99
PTBP1-217ENST00000592113 DIP2CQ9Y2E4 1556 aa33.73■■■□□ 2.99
PTBP1-217ENST00000592113 ARHGEF40Q8TER5 1519 aa33.73■■■□□ 2.99
PTBP1-217ENST00000592113 SETD5Q9C0A6 1442 aa33.72■■■□□ 2.99
PTBP1-217ENST00000592113 ERBINQ96RT1 1412 aa33.66■■■□□ 2.98
PTBP1-217ENST00000592113 ANKRD50Q9ULJ7 1429 aa33.66■■■□□ 2.98
PTBP1-217ENST00000592113 YEATS2Q9ULM3 1422 aa33.66■■■□□ 2.98
PTBP1-217ENST00000592113 EIF2AK4Q9P2K8 1649 aaKnown RBP33.65■■■□□ 2.98
PTBP1-217ENST00000592113 A2MP01023 1474 aa33.64■■■□□ 2.98
PTBP1-217ENST00000592113 REREQ9P2R6 1566 aa33.61■■■□□ 2.97
PTBP1-217ENST00000592113 RAB3GAP2Q9H2M9 1393 aa33.61■■■□□ 2.97
PTBP1-217ENST00000592113 ATP10AO60312 1499 aa33.6■■■□□ 2.97
PTBP1-217ENST00000592113 DHX29Q7Z478 1369 aaKnown RBP33.58■■■□□ 2.97
PTBP1-217ENST00000592113 ACIN1Q9UKV3 1341 aaKnown RBP33.56■■■□□ 2.96
PTBP1-217ENST00000592113 BCORL1Q5H9F3 1711 aa33.54■■■□□ 2.96
PTBP1-217ENST00000592113 UNC13BO14795 1591 aa33.5■■■□□ 2.95
PTBP1-217ENST00000592113 HRCP23327 699 aa33.49■■■□□ 2.95
PTBP1-217ENST00000592113 DEPDC5O75140 1603 aa33.48■■■□□ 2.95
PTBP1-217ENST00000592113 RNF17Q9BXT8 1623 aaKnown RBP33.46■■■□□ 2.95
PTBP1-217ENST00000592113 AGLP35573 1532 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms