RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
GFAP-221ENST00000592065 KDM4FA0A1W2PPD8 638 aa20.28■□□□□ 0.84
GFAP-221ENST00000592065 ADGRL1O94910 1474 aa20.27■□□□□ 0.84
GFAP-221ENST00000592065 CDC42BPBQ9Y5S2 1711 aa20.27■□□□□ 0.84
GFAP-221ENST00000592065 CCER1Q8TC90 406 aaPredicted RBP20.26■□□□□ 0.83
GFAP-221ENST00000592065 SCAPERQ9BY12 1400 aa20.25■□□□□ 0.83
GFAP-221ENST00000592065 KANK4Q5T7N3 995 aaPredicted RBP20.24■□□□□ 0.83
GFAP-221ENST00000592065 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
GFAP-221ENST00000592065 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
GFAP-221ENST00000592065 DENND4BO75064 1496 aaPredicted RBP20.23■□□□□ 0.83
GFAP-221ENST00000592065 RICTORQ6R327 1708 aa20.23■□□□□ 0.83
GFAP-221ENST00000592065 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
GFAP-221ENST00000592065 EFCAB2Q5VUJ9 269 aa20.22■□□□□ 0.83
GFAP-221ENST00000592065 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
GFAP-221ENST00000592065 PREX2Q70Z35 1606 aa20.21■□□□□ 0.83
GFAP-221ENST00000592065 YEATS2Q9ULM3 1422 aa20.21■□□□□ 0.83
GFAP-221ENST00000592065 TIAM1Q13009 1591 aa20.21■□□□□ 0.83
GFAP-221ENST00000592065 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
GFAP-221ENST00000592065 ARHGEF12Q9NZN5 1544 aa20.19■□□□□ 0.82
GFAP-221ENST00000592065 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
GFAP-221ENST00000592065 CFAP74Q9C0B2 1584 aa20.19■□□□□ 0.82
GFAP-221ENST00000592065 POGZQ7Z3K3 1410 aa20.17■□□□□ 0.82
GFAP-221ENST00000592065 EHBP1L1Q8N3D4 1523 aa20.16■□□□□ 0.82
GFAP-221ENST00000592065 PHLDB1Q86UU1 1377 aa20.16■□□□□ 0.82
GFAP-221ENST00000592065 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
GFAP-221ENST00000592065 CCNB3Q8WWL7 1395 aa20.16■□□□□ 0.82
GFAP-221ENST00000592065 TRAPPC8Q9Y2L5 1435 aa20.15■□□□□ 0.82
GFAP-221ENST00000592065 SIGLEC1Q9BZZ2 1709 aa20.15■□□□□ 0.82
GFAP-221ENST00000592065 CFDP1Q9UEE9 299 aaPredicted RBP20.15■□□□□ 0.82
GFAP-221ENST00000592065 HNRNPMP52272 730 aaKnown RBP eCLIP20.14■□□□□ 0.82
GFAP-221ENST00000592065 ARID4BQ4LE39 1312 aaPredicted RBP20.14■□□□□ 0.81
GFAP-221ENST00000592065 SAMD9LQ8IVG5 1584 aa20.14■□□□□ 0.81
GFAP-221ENST00000592065 NCOA2Q15596 1464 aa20.13■□□□□ 0.81
GFAP-221ENST00000592065 SYCP2Q9BX26 1530 aa20.12■□□□□ 0.81
GFAP-221ENST00000592065 LRRC9Q6ZRR7 1453 aa20.12■□□□□ 0.81
GFAP-221ENST00000592065 ABCC1P33527 1531 aa20.12■□□□□ 0.81
GFAP-221ENST00000592065 MLECQ14165 292 aa20.11■□□□□ 0.81
GFAP-221ENST00000592065 ARHGEF40Q8TER5 1519 aa20.1■□□□□ 0.81
GFAP-221ENST00000592065 PLPPR3Q6T4P5 718 aa20.09■□□□□ 0.81
GFAP-221ENST00000592065 ZFYVE16Q7Z3T8 1539 aa20.08■□□□□ 0.81
GFAP-221ENST00000592065 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.8
GFAP-221ENST00000592065 ITSN2Q9NZM3 1697 aa20.07■□□□□ 0.8
GFAP-221ENST00000592065 ZMYM4Q5VZL5 1548 aa20.07■□□□□ 0.8
GFAP-221ENST00000592065 ZNF518AQ6AHZ1 1483 aa20.07■□□□□ 0.8
GFAP-221ENST00000592065 APLP2Q06481 763 aa20.05■□□□□ 0.8
GFAP-221ENST00000592065 KDM5CP41229 1560 aa20.03■□□□□ 0.8
GFAP-221ENST00000592065 ABCA6Q8N139 1617 aa20.01■□□□□ 0.79
GFAP-221ENST00000592065 HECW2Q9P2P5 1572 aa20.01■□□□□ 0.79
GFAP-221ENST00000592065 DIEXFQ68CQ4 756 aaKnown RBP20■□□□□ 0.79
GFAP-221ENST00000592065 ACIN1Q9UKV3 1341 aaKnown RBP19.98■□□□□ 0.79
GFAP-221ENST00000592065 DIP2CQ9Y2E4 1556 aa19.98■□□□□ 0.79
GFAP-221ENST00000592065 CAMSAP2Q08AD1 1489 aa19.98■□□□□ 0.79
GFAP-221ENST00000592065 KIDINS220Q9ULH0 1771 aa19.98■□□□□ 0.79
GFAP-221ENST00000592065 MADDQ8WXG6 1647 aa19.98■□□□□ 0.79
GFAP-221ENST00000592065 BCORL1Q5H9F3 1711 aa19.96■□□□□ 0.79
GFAP-221ENST00000592065 MAGI2Q86UL8 1455 aa19.96■□□□□ 0.79
GFAP-221ENST00000592065 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
GFAP-221ENST00000592065 MAP3K1Q13233 1512 aa19.95■□□□□ 0.78
GFAP-221ENST00000592065 ATP10AO60312 1499 aa19.95■□□□□ 0.78
GFAP-221ENST00000592065 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
GFAP-221ENST00000592065 MLH3Q9UHC1 1453 aa19.93■□□□□ 0.78
GFAP-221ENST00000592065 C9orf84Q5VXU9 1444 aa19.93■□□□□ 0.78
GFAP-221ENST00000592065 ADAMTSL3P82987 1691 aa19.93■□□□□ 0.78
GFAP-221ENST00000592065 MYOM3Q5VTT5 1437 aa19.92■□□□□ 0.78
GFAP-221ENST00000592065 KIAA1107Q9UPP5 1409 aa19.91■□□□□ 0.78
GFAP-221ENST00000592065 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
GFAP-221ENST00000592065 RIMS1Q86UR5 1692 aaKnown RBP19.91■□□□□ 0.78
GFAP-221ENST00000592065 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
GFAP-221ENST00000592065 PTPRMP28827 1452 aa19.89■□□□□ 0.77
GFAP-221ENST00000592065 INO80Q9ULG1 1556 aaPredicted RBP19.88■□□□□ 0.77
GFAP-221ENST00000592065 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
GFAP-221ENST00000592065 CEBPAP49715 358 aaPredicted RBP19.88■□□□□ 0.77
GFAP-221ENST00000592065 CCDC141Q6ZP82 1450 aa19.85■□□□□ 0.77
GFAP-221ENST00000592065 FER1L4A9Z1Z3 1794 aa19.84■□□□□ 0.77
GFAP-221ENST00000592065 ZNF316A6NFI3 1004 aaPredicted RBP19.83■□□□□ 0.76
GFAP-221ENST00000592065 CENPBP07199 599 aaPredicted RBP19.82■□□□□ 0.76
GFAP-221ENST00000592065 FGD6Q6ZV73 1430 aa19.82■□□□□ 0.76
GFAP-221ENST00000592065 PTPN23Q9H3S7 1636 aa19.82■□□□□ 0.76
GFAP-221ENST00000592065 GGT6Q6P531 493 aa19.81■□□□□ 0.76
GFAP-221ENST00000592065 FAM50AQ14320 339 aaKnown RBP19.81■□□□□ 0.76
GFAP-221ENST00000592065 CHIC2Q9UKJ5 165 aa19.81■□□□□ 0.76
GFAP-221ENST00000592065 A2MP01023 1474 aa19.79■□□□□ 0.76
GFAP-221ENST00000592065 MIA2Q96PC5 1412 aa19.78■□□□□ 0.76
GFAP-221ENST00000592065 ADGBQ8N7X0 1667 aa19.78■□□□□ 0.76
GFAP-221ENST00000592065 TSPY4P0CV99 314 aa19.77■□□□□ 0.76
GFAP-221ENST00000592065 TSPY10P0CW01 314 aa19.77■□□□□ 0.76
GFAP-221ENST00000592065 PLXNC1O60486 1568 aa19.76■□□□□ 0.75
GFAP-221ENST00000592065 ARHGEF5Q12774 1597 aa19.76■□□□□ 0.75
GFAP-221ENST00000592065 REREQ9P2R6 1566 aa19.76■□□□□ 0.75
GFAP-221ENST00000592065 KIF3BO15066 747 aa19.74■□□□□ 0.75
GFAP-221ENST00000592065 ABCC5O15440 1437 aa19.74■□□□□ 0.75
GFAP-221ENST00000592065 ITGAEP38570 1179 aa19.74■□□□□ 0.75
GFAP-221ENST00000592065 HSPA2P54652 639 aa19.74■□□□□ 0.75
GFAP-221ENST00000592065 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
GFAP-221ENST00000592065 AGLP35573 1532 aa19.72■□□□□ 0.75
GFAP-221ENST00000592065 GTF3C3Q9Y5Q9 886 aa19.71■□□□□ 0.75
GFAP-221ENST00000592065 DAPK1P53355 1430 aa19.71■□□□□ 0.75
GFAP-221ENST00000592065 ESF1Q9H501 851 aaKnown RBP19.71■□□□□ 0.75
GFAP-221ENST00000592065 RTEL1-TNFRSF6BF6WH68 1400 aa19.71■□□□□ 0.75
GFAP-221ENST00000592065 DHX29Q7Z478 1369 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms