RNA–Protein interactions for RNA: ENST00000591880.2

GFAP-220, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-220ENST00000591880 POGZQ7Z3K3 1410 aa17.73■□□□□ 0.43
GFAP-220ENST00000591880 PREX2Q70Z35 1606 aa17.73■□□□□ 0.43
GFAP-220ENST00000591880 MAGI2Q86UL8 1455 aa17.73■□□□□ 0.43
GFAP-220ENST00000591880 EHBP1L1Q8N3D4 1523 aa17.71■□□□□ 0.43
GFAP-220ENST00000591880 SCAPERQ9BY12 1400 aa17.71■□□□□ 0.43
GFAP-220ENST00000591880 MTUS2Q5JR59 1369 aa17.7■□□□□ 0.42
GFAP-220ENST00000591880 ZNF518AQ6AHZ1 1483 aa17.69■□□□□ 0.42
GFAP-220ENST00000591880 ZFYVE16Q7Z3T8 1539 aa17.69■□□□□ 0.42
GFAP-220ENST00000591880 VPS8Q8N3P4 1428 aa17.68■□□□□ 0.42
GFAP-220ENST00000591880 CDC42BPBQ9Y5S2 1711 aa17.67■□□□□ 0.42
GFAP-220ENST00000591880 CDC42BPAQ5VT25 1732 aa17.66■□□□□ 0.42
GFAP-220ENST00000591880 ABCC1P33527 1531 aa17.66■□□□□ 0.42
GFAP-220ENST00000591880 KDM5CP41229 1560 aa17.65■□□□□ 0.42
GFAP-220ENST00000591880 LOC105371045A0A1W2PR82 267 aa17.64■□□□□ 0.41
GFAP-220ENST00000591880 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
GFAP-220ENST00000591880 GPATCH8Q9UKJ3 1502 aaKnown RBP17.62■□□□□ 0.41
GFAP-220ENST00000591880 ITSN2Q9NZM3 1697 aa17.61■□□□□ 0.41
GFAP-220ENST00000591880 PLEKHH2Q8IVE3 1493 aa17.61■□□□□ 0.41
GFAP-220ENST00000591880 HECW2Q9P2P5 1572 aa17.61■□□□□ 0.41
GFAP-220ENST00000591880 BCORL1Q5H9F3 1711 aa17.61■□□□□ 0.41
GFAP-220ENST00000591880 YEATS2Q9ULM3 1422 aa17.6■□□□□ 0.41
GFAP-220ENST00000591880 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
GFAP-220ENST00000591880 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
GFAP-220ENST00000591880 C9orf84Q5VXU9 1444 aa17.59■□□□□ 0.41
GFAP-220ENST00000591880 ARID4BQ4LE39 1312 aaPredicted RBP17.59■□□□□ 0.41
GFAP-220ENST00000591880 MAP3K1Q13233 1512 aa17.58■□□□□ 0.41
GFAP-220ENST00000591880 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.4
GFAP-220ENST00000591880 SAMD9LQ8IVG5 1584 aa17.57■□□□□ 0.4
GFAP-220ENST00000591880 MLH3Q9UHC1 1453 aa17.57■□□□□ 0.4
GFAP-220ENST00000591880 ATP10AO60312 1499 aa17.56■□□□□ 0.4
GFAP-220ENST00000591880 KIAA1107Q9UPP5 1409 aa17.56■□□□□ 0.4
GFAP-220ENST00000591880 REREQ9P2R6 1566 aa17.55■□□□□ 0.4
GFAP-220ENST00000591880 CFDP1Q9UEE9 299 aaPredicted RBP17.55■□□□□ 0.4
GFAP-220ENST00000591880 SYCP2Q9BX26 1530 aa17.55■□□□□ 0.4
GFAP-220ENST00000591880 ARHGEF12Q9NZN5 1544 aa17.54■□□□□ 0.4
GFAP-220ENST00000591880 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
GFAP-220ENST00000591880 TRAPPC8Q9Y2L5 1435 aa17.53■□□□□ 0.4
GFAP-220ENST00000591880 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
GFAP-220ENST00000591880 NCOA2Q15596 1464 aa17.52■□□□□ 0.4
GFAP-220ENST00000591880 LRRC9Q6ZRR7 1453 aa17.52■□□□□ 0.4
GFAP-220ENST00000591880 MADDQ8WXG6 1647 aa17.52■□□□□ 0.4
GFAP-220ENST00000591880 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.4
GFAP-220ENST00000591880 ZNF777Q9ULD5 760 aaPredicted RBP17.52■□□□□ 0.4
GFAP-220ENST00000591880 PTPRMP28827 1452 aa17.51■□□□□ 0.39
GFAP-220ENST00000591880 ABCA6Q8N139 1617 aa17.5■□□□□ 0.39
GFAP-220ENST00000591880 SIGLEC1Q9BZZ2 1709 aa17.48■□□□□ 0.39
GFAP-220ENST00000591880 KIDINS220Q9ULH0 1771 aa17.47■□□□□ 0.39
GFAP-220ENST00000591880 AGLP35573 1532 aa17.47■□□□□ 0.39
GFAP-220ENST00000591880 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
GFAP-220ENST00000591880 APLP2Q06481 763 aa17.46■□□□□ 0.39
GFAP-220ENST00000591880 ATP7AQ04656 1500 aa17.46■□□□□ 0.39
GFAP-220ENST00000591880 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.38
GFAP-220ENST00000591880 INO80Q9ULG1 1556 aaPredicted RBP17.45■□□□□ 0.38
GFAP-220ENST00000591880 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
GFAP-220ENST00000591880 CAMSAP2Q08AD1 1489 aa17.44■□□□□ 0.38
GFAP-220ENST00000591880 HNRNPMP52272 730 aaKnown RBP eCLIP17.43■□□□□ 0.38
GFAP-220ENST00000591880 CCDC141Q6ZP82 1450 aa17.42■□□□□ 0.38
GFAP-220ENST00000591880 MBD5Q9P267 1494 aa17.42■□□□□ 0.38
GFAP-220ENST00000591880 RSPH4AQ5TD94 716 aa17.41■□□□□ 0.38
GFAP-220ENST00000591880 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
GFAP-220ENST00000591880 MIA2Q96PC5 1412 aa17.4■□□□□ 0.38
GFAP-220ENST00000591880 MLECQ14165 292 aa17.39■□□□□ 0.37
GFAP-220ENST00000591880 MYOM3Q5VTT5 1437 aa17.38■□□□□ 0.37
GFAP-220ENST00000591880 PLXNC1O60486 1568 aa17.38■□□□□ 0.37
GFAP-220ENST00000591880 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
GFAP-220ENST00000591880 ADGBQ8N7X0 1667 aa17.38■□□□□ 0.37
GFAP-220ENST00000591880 A2MP01023 1474 aa17.37■□□□□ 0.37
GFAP-220ENST00000591880 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
GFAP-220ENST00000591880 ZNF644Q9H582 1327 aaPredicted RBP17.36■□□□□ 0.37
GFAP-220ENST00000591880 CNTLNQ9NXG0 1405 aa17.36■□□□□ 0.37
GFAP-220ENST00000591880 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
GFAP-220ENST00000591880 TSPY4P0CV99 314 aa17.31■□□□□ 0.36
GFAP-220ENST00000591880 TSPY10P0CW01 314 aa17.31■□□□□ 0.36
GFAP-220ENST00000591880 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
GFAP-220ENST00000591880 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
GFAP-220ENST00000591880 MROH2AA6NES4 1674 aa17.29■□□□□ 0.36
GFAP-220ENST00000591880 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
GFAP-220ENST00000591880 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
GFAP-220ENST00000591880 PREX1Q8TCU6 1659 aa17.27■□□□□ 0.36
GFAP-220ENST00000591880 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
GFAP-220ENST00000591880 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
GFAP-220ENST00000591880 C3P01024 1663 aa17.26■□□□□ 0.35
GFAP-220ENST00000591880 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
GFAP-220ENST00000591880 FGD6Q6ZV73 1430 aa17.25■□□□□ 0.35
GFAP-220ENST00000591880 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
GFAP-220ENST00000591880 TCOF1Q13428 1488 aaKnown RBP17.24■□□□□ 0.35
GFAP-220ENST00000591880 UHRF1BP1Q6BDS2 1440 aa17.23■□□□□ 0.35
GFAP-220ENST00000591880 CROCC2H7BZ55 1655 aa17.22■□□□□ 0.35
GFAP-220ENST00000591880 NPATQ14207 1427 aa17.21■□□□□ 0.35
GFAP-220ENST00000591880 EIF2AK4Q9P2K8 1649 aaKnown RBP17.21■□□□□ 0.35
GFAP-220ENST00000591880 CLTCQ00610 1675 aaKnown RBP17.2■□□□□ 0.34
GFAP-220ENST00000591880 GGT6Q6P531 493 aa17.2■□□□□ 0.34
GFAP-220ENST00000591880 DNMT1P26358 1616 aaKnown RBP17.2■□□□□ 0.34
GFAP-220ENST00000591880 KDM5DQ9BY66 1539 aa17.2■□□□□ 0.34
GFAP-220ENST00000591880 CEBPAP49715 358 aaPredicted RBP17.19■□□□□ 0.34
GFAP-220ENST00000591880 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
GFAP-220ENST00000591880 DUOX2Q9NRD8 1548 aa17.18■□□□□ 0.34
GFAP-220ENST00000591880 DAPK1P53355 1430 aa17.18■□□□□ 0.34
GFAP-220ENST00000591880 SETD1BQ9UPS6 1966 aaKnown RBP17.18■□□□□ 0.34
GFAP-220ENST00000591880 KIF3BO15066 747 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms