RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 PDE4AP27815 886 aa8.58□□□□□ -1.04
VMP1-212ENST00000591782 C3orf67Q6ZVT6 689 aa8.57□□□□□ -1.04
VMP1-212ENST00000591782 LARP6Q9BRS8 491 aaKnown RBP8.57□□□□□ -1.04
VMP1-212ENST00000591782 TMEM92Q6UXU6 159 aa8.56□□□□□ -1.04
VMP1-212ENST00000591782 GPHNQ9NQX3 736 aaPredicted RBP8.56□□□□□ -1.04
VMP1-212ENST00000591782 WDR70Q9NW82 654 aa8.55□□□□□ -1.04
VMP1-212ENST00000591782 MFSD10Q14728 455 aa8.54□□□□□ -1.04
VMP1-212ENST00000591782 TMC2Q8TDI7 906 aa8.54□□□□□ -1.04
VMP1-212ENST00000591782 C2orf72A6NCS6 295 aa8.53□□□□□ -1.04
VMP1-212ENST00000591782 KIF3CO14782 793 aa8.53□□□□□ -1.04
VMP1-212ENST00000591782 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
VMP1-212ENST00000591782 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.53□□□□□ -1.04
VMP1-212ENST00000591782 DSG2Q14126 1118 aa8.51□□□□□ -1.05
VMP1-212ENST00000591782 PPP1R15BQ5SWA1 713 aa8.51□□□□□ -1.05
VMP1-212ENST00000591782 FOXK1P85037 733 aa8.5□□□□□ -1.05
VMP1-212ENST00000591782 KCNV2Q8TDN2 545 aa8.48□□□□□ -1.05
VMP1-212ENST00000591782 SCUBE2Q9NQ36 999 aa8.48□□□□□ -1.05
VMP1-212ENST00000591782 E2F4Q16254 413 aa8.47□□□□□ -1.05
VMP1-212ENST00000591782 MAMSTRQ6ZN01 415 aa8.47□□□□□ -1.05
VMP1-212ENST00000591782 PLPP6Q8IY26 295 aa8.47□□□□□ -1.05
VMP1-212ENST00000591782 LHX8Q68G74 356 aa8.46□□□□□ -1.06
VMP1-212ENST00000591782 CAMK2BQ13554 666 aa8.45□□□□□ -1.06
VMP1-212ENST00000591782 P3H3Q8IVL6 736 aa8.45□□□□□ -1.06
VMP1-212ENST00000591782 SLAIN1Q8ND83 568 aa8.45□□□□□ -1.06
VMP1-212ENST00000591782 OTUD5Q96G74 571 aa8.43□□□□□ -1.06
VMP1-212ENST00000591782 EMILIN3Q9NT22 766 aa8.41□□□□□ -1.06
VMP1-212ENST00000591782 ARHGEF1Q92888 912 aaKnown RBP8.39□□□□□ -1.07
VMP1-212ENST00000591782 UPF1Q92900 1129 aaKnown RBP eCLIP8.37□□□□□ -1.07
VMP1-212ENST00000591782 BCANQ96GW7 911 aa8.37□□□□□ -1.07
VMP1-212ENST00000591782 DPYSL4O14531 572 aa8.36□□□□□ -1.07
VMP1-212ENST00000591782 ARIH1Q9Y4X5 557 aaPredicted RBP8.36□□□□□ -1.07
VMP1-212ENST00000591782 HOXB3P14651 431 aaPredicted RBP8.35□□□□□ -1.07
VMP1-212ENST00000591782 NBR1Q14596 966 aa8.35□□□□□ -1.07
VMP1-212ENST00000591782 OXER1Q8TDS5 423 aa8.35□□□□□ -1.07
VMP1-212ENST00000591782 SLC34A2O95436 690 aa8.34□□□□□ -1.07
VMP1-212ENST00000591782 MAP3K9P80192 1104 aa8.33□□□□□ -1.08
VMP1-212ENST00000591782 PTCD2Q8WV60 388 aaKnown RBP8.33□□□□□ -1.08
VMP1-212ENST00000591782 DOK7Q18PE1 504 aa8.32□□□□□ -1.08
VMP1-212ENST00000591782 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
VMP1-212ENST00000591782 SEMA3EO15041 775 aa8.3□□□□□ -1.08
VMP1-212ENST00000591782 PDIA6Q15084 440 aa8.3□□□□□ -1.08
VMP1-212ENST00000591782 SNPHO15079 494 aa8.29□□□□□ -1.08
VMP1-212ENST00000591782 TBC1D12O60347 775 aa8.29□□□□□ -1.08
VMP1-212ENST00000591782 ZNF710Q8N1W2 664 aa8.28□□□□□ -1.08
VMP1-212ENST00000591782 SPDYE16A6NNV3 312 aaPredicted RBP8.27□□□□□ -1.09
VMP1-212ENST00000591782 RIMBP2O15034 1052 aa8.27□□□□□ -1.09
VMP1-212ENST00000591782 EVI5O60447 810 aa8.27□□□□□ -1.09
VMP1-212ENST00000591782 ARSIQ5FYB1 569 aa8.27□□□□□ -1.09
VMP1-212ENST00000591782 KHSRPQ92945 711 aaKnown RBP eCLIP8.27□□□□□ -1.09
VMP1-212ENST00000591782 GPR153Q6NV75 609 aa8.26□□□□□ -1.09
VMP1-212ENST00000591782 ZSWIM6Q9HCJ5 1215 aa8.26□□□□□ -1.09
VMP1-212ENST00000591782 TESPA1A2RU30 521 aaPredicted RBP8.24□□□□□ -1.09
VMP1-212ENST00000591782 NUDT7P0C024 238 aa8.24□□□□□ -1.09
VMP1-212ENST00000591782 MLLT3P42568 568 aaPredicted RBP8.24□□□□□ -1.09
VMP1-212ENST00000591782 KDM4FA0A1W2PPD8 638 aa8.23□□□□□ -1.09
VMP1-212ENST00000591782 ZNF316A6NFI3 1004 aaPredicted RBP8.23□□□□□ -1.09
VMP1-212ENST00000591782 ANO8Q9HCE9 1232 aaPredicted RBP8.22□□□□□ -1.09
VMP1-212ENST00000591782 HOXB1P14653 301 aaPredicted RBP8.21□□□□□ -1.1
VMP1-212ENST00000591782 DDX12PQ92771 950 aa8.21□□□□□ -1.1
VMP1-212ENST00000591782 GRXCR2A6NFK2 248 aa8.2□□□□□ -1.1
VMP1-212ENST00000591782 PTGER2P43116 358 aa8.2□□□□□ -1.1
VMP1-212ENST00000591782 ST18O60284 1047 aa8.19□□□□□ -1.1
VMP1-212ENST00000591782 SMYD5Q6GMV2 418 aa8.18□□□□□ -1.1
VMP1-212ENST00000591782 TULP1O00294 542 aaPredicted RBP8.17□□□□□ -1.1
VMP1-212ENST00000591782 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
VMP1-212ENST00000591782 FAM163AQ96GL9 167 aaPredicted RBP8.17□□□□□ -1.1
VMP1-212ENST00000591782 LHX6Q9UPM6 363 aa8.17□□□□□ -1.1
VMP1-212ENST00000591782 LMOD2Q6P5Q4 547 aa8.16□□□□□ -1.1
VMP1-212ENST00000591782 PHF14O94880 888 aa8.15□□□□□ -1.1
VMP1-212ENST00000591782 OSBPP22059 807 aa8.15□□□□□ -1.1
VMP1-212ENST00000591782 RBM26Q5T8P6 1007 aaKnown RBP8.15□□□□□ -1.1
VMP1-212ENST00000591782 JPH4Q96JJ6 628 aa8.15□□□□□ -1.1
VMP1-212ENST00000591782 PCDHGA10Q9Y5H3 936 aa8.15□□□□□ -1.1
VMP1-212ENST00000591782 PRIM1P49642 420 aaKnown RBP8.14□□□□□ -1.11
VMP1-212ENST00000591782 LCE2DQ5TA82 110 aaPredicted RBP8.14□□□□□ -1.11
VMP1-212ENST00000591782 ZNF454Q8N9F8 522 aa8.14□□□□□ -1.11
VMP1-212ENST00000591782 FOSBP53539 338 aa8.13□□□□□ -1.11
VMP1-212ENST00000591782 MARVELD3Q96A59 401 aa8.13□□□□□ -1.11
VMP1-212ENST00000591782 EPAS1Q99814 870 aa8.12□□□□□ -1.11
VMP1-212ENST00000591782 EMP3P54852 163 aa8.11□□□□□ -1.11
VMP1-212ENST00000591782 EN1Q05925 392 aaPredicted RBP8.1□□□□□ -1.11
VMP1-212ENST00000591782 TYW1BQ6NUM6 668 aa8.1□□□□□ -1.11
VMP1-212ENST00000591782 ZDHHC16Q969W1 377 aa8.1□□□□□ -1.11
VMP1-212ENST00000591782 RBM33Q96EV2 1170 aaKnown RBP8.1□□□□□ -1.11
VMP1-212ENST00000591782 ERBB3P21860 1342 aa8.09□□□□□ -1.11
VMP1-212ENST00000591782 PSDA5PKW4 1024 aaPredicted RBP8.09□□□□□ -1.11
VMP1-212ENST00000591782 PPP4R3BQ5MIZ7 849 aa8.09□□□□□ -1.11
VMP1-212ENST00000591782 FBXW7Q969H0 707 aa8.09□□□□□ -1.11
VMP1-212ENST00000591782 MAP3K7O43318 606 aa8.08□□□□□ -1.12
VMP1-212ENST00000591782 TPRNQ4KMQ1 711 aa8.08□□□□□ -1.12
VMP1-212ENST00000591782 VARS2Q5ST30 1063 aaKnown RBP8.08□□□□□ -1.12
VMP1-212ENST00000591782 ADAM33Q9BZ11 813 aa8.08□□□□□ -1.12
VMP1-212ENST00000591782 NUTM2FA1L443 756 aa8.07□□□□□ -1.12
VMP1-212ENST00000591782 FAM205CA6NFA0 338 aa8.07□□□□□ -1.12
VMP1-212ENST00000591782 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
VMP1-212ENST00000591782 GPIHBP1Q8IV16 184 aa8.07□□□□□ -1.12
VMP1-212ENST00000591782 CDHR5Q9HBB8 845 aa8.06□□□□□ -1.12
VMP1-212ENST00000591782 PRKCSHP14314 528 aaPredicted RBP8.05□□□□□ -1.12
VMP1-212ENST00000591782 C6orf132Q5T0Z8 1188 aa8.05□□□□□ -1.12
VMP1-212ENST00000591782 ZC3H15Q8WU90 426 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms