RNA–Protein interactions for RNA: ENST00000590934.1

TMC6-217, Transcript of transmembrane channel like 6, humanhuman

TSL 5

Gene TMC6, Length 386 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-217ENST00000590934 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
TMC6-217ENST00000590934 GLI2P10070 1586 aa17.34■□□□□ 0.37
TMC6-217ENST00000590934 PTPRKQ15262 1439 aa17.34■□□□□ 0.37
TMC6-217ENST00000590934 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
TMC6-217ENST00000590934 KDM5BQ9UGL1 1544 aa17.34■□□□□ 0.37
TMC6-217ENST00000590934 AKNAQ7Z591 1439 aa17.33■□□□□ 0.36
TMC6-217ENST00000590934 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
TMC6-217ENST00000590934 DHX57Q6P158 1386 aaKnown RBP17.32■□□□□ 0.36
TMC6-217ENST00000590934 RAB3GAP2Q9H2M9 1393 aa17.32■□□□□ 0.36
TMC6-217ENST00000590934 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
TMC6-217ENST00000590934 ZCCHC11Q5TAX3 1644 aaKnown RBP17.3■□□□□ 0.36
TMC6-217ENST00000590934 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
TMC6-217ENST00000590934 MAP3K4Q9Y6R4 1608 aa17.28■□□□□ 0.36
TMC6-217ENST00000590934 CFDP1Q9UEE9 299 aaPredicted RBP17.26■□□□□ 0.35
TMC6-217ENST00000590934 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
TMC6-217ENST00000590934 ADGRL1O94910 1474 aa17.25■□□□□ 0.35
TMC6-217ENST00000590934 CAMSAP2Q08AD1 1489 aa17.25■□□□□ 0.35
TMC6-217ENST00000590934 DAPK1P53355 1430 aa17.25■□□□□ 0.35
TMC6-217ENST00000590934 NAIPQ13075 1403 aa17.25■□□□□ 0.35
TMC6-217ENST00000590934 DNMT1P26358 1616 aaKnown RBP17.25■□□□□ 0.35
TMC6-217ENST00000590934 ABCC5O15440 1437 aa17.24■□□□□ 0.35
TMC6-217ENST00000590934 CDC42BPAQ5VT25 1732 aa17.21■□□□□ 0.35
TMC6-217ENST00000590934 ZNF644Q9H582 1327 aaPredicted RBP17.21■□□□□ 0.34
TMC6-217ENST00000590934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.2■□□□□ 0.342e-14■□□□□ 8.6
TMC6-217ENST00000590934 PREX2Q70Z35 1606 aa17.19■□□□□ 0.34
TMC6-217ENST00000590934 TEX14Q8IWB6 1497 aa17.18■□□□□ 0.34
TMC6-217ENST00000590934 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
TMC6-217ENST00000590934 SHANK2Q9UPX8 1470 aa17.18■□□□□ 0.34
TMC6-217ENST00000590934 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
TMC6-217ENST00000590934 GCC2Q8IWJ2 1684 aa17.17■□□□□ 0.34
TMC6-217ENST00000590934 TTC37Q6PGP7 1564 aa17.17■□□□□ 0.34
TMC6-217ENST00000590934 ADGRL2O95490 1459 aa17.17■□□□□ 0.34
TMC6-217ENST00000590934 KCNH8Q96L42 1107 aa17.16■□□□□ 0.34
TMC6-217ENST00000590934 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
TMC6-217ENST00000590934 ILDR1Q86SU0 546 aaPredicted RBP17.14■□□□□ 0.33
TMC6-217ENST00000590934 ARAP3Q8WWN8 1544 aa17.14■□□□□ 0.33
TMC6-217ENST00000590934 PLCH2O75038 1416 aa17.13■□□□□ 0.33
TMC6-217ENST00000590934 MBD5Q9P267 1494 aa17.13■□□□□ 0.33
TMC6-217ENST00000590934 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
TMC6-217ENST00000590934 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
TMC6-217ENST00000590934 KIAA1107Q9UPP5 1409 aa17.12■□□□□ 0.33
TMC6-217ENST00000590934 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
TMC6-217ENST00000590934 RSPH4AQ5TD94 716 aa17.11■□□□□ 0.33
TMC6-217ENST00000590934 CHIC2Q9UKJ5 165 aa17.11■□□□□ 0.33
TMC6-217ENST00000590934 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
TMC6-217ENST00000590934 CD109Q6YHK3 1445 aa17.11■□□□□ 0.33
TMC6-217ENST00000590934 RRP7BPQ9NSQ0 103 aa17.1■□□□□ 0.33
TMC6-217ENST00000590934 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
TMC6-217ENST00000590934 ARHGAP5Q13017 1502 aa17.1■□□□□ 0.33
TMC6-217ENST00000590934 CDC42BPBQ9Y5S2 1711 aa17.1■□□□□ 0.33
TMC6-217ENST00000590934 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.32
TMC6-217ENST00000590934 HECW2Q9P2P5 1572 aa17.08■□□□□ 0.32
TMC6-217ENST00000590934 CCDC141Q6ZP82 1450 aa17.08■□□□□ 0.32
TMC6-217ENST00000590934 ANKRD30AQ9BXX3 1397 aa17.08■□□□□ 0.32
TMC6-217ENST00000590934 ADGBQ8N7X0 1667 aa17.07■□□□□ 0.32
TMC6-217ENST00000590934 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
TMC6-217ENST00000590934 ABCA9Q8IUA7 1624 aa17.06■□□□□ 0.32
TMC6-217ENST00000590934 MAST1Q9Y2H9 1570 aa17.04■□□□□ 0.32
TMC6-217ENST00000590934 EFCAB2Q5VUJ9 269 aa17.04■□□□□ 0.32
TMC6-217ENST00000590934 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
TMC6-217ENST00000590934 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
TMC6-217ENST00000590934 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
TMC6-217ENST00000590934 ABCC1P33527 1531 aa17.01■□□□□ 0.31
TMC6-217ENST00000590934 HNRNPMP52272 730 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMC6-217ENST00000590934 TIMELESSQ9UNS1 1208 aa17■□□□□ 0.31
TMC6-217ENST00000590934 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
TMC6-217ENST00000590934 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
TMC6-217ENST00000590934 ANKRD50Q9ULJ7 1429 aa16.98■□□□□ 0.31
TMC6-217ENST00000590934 KIF15Q9NS87 1388 aa16.96■□□□□ 0.31
TMC6-217ENST00000590934 PLXNC1O60486 1568 aa16.95■□□□□ 0.3
TMC6-217ENST00000590934 FANCAO15360 1455 aa16.95■□□□□ 0.3
TMC6-217ENST00000590934 MPHOSPH9Q99550 1183 aa16.94■□□□□ 0.3
TMC6-217ENST00000590934 KDM5DQ9BY66 1539 aa16.93■□□□□ 0.3
TMC6-217ENST00000590934 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
TMC6-217ENST00000590934 RTEL1-TNFRSF6BF6WH68 1400 aa16.93■□□□□ 0.3
TMC6-217ENST00000590934 PZPP20742 1482 aa16.93■□□□□ 0.3
TMC6-217ENST00000590934 RAPGEF3O95398 923 aa16.92■□□□□ 0.3
TMC6-217ENST00000590934 TRAPPC8Q9Y2L5 1435 aa16.92■□□□□ 0.3
TMC6-217ENST00000590934 SIN3AQ96ST3 1273 aa16.89■□□□□ 0.29
TMC6-217ENST00000590934 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
TMC6-217ENST00000590934 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
TMC6-217ENST00000590934 ERBINQ96RT1 1412 aa16.87■□□□□ 0.29
TMC6-217ENST00000590934 ADAMTSL3P82987 1691 aa16.87■□□□□ 0.29
TMC6-217ENST00000590934 ZFYVE16Q7Z3T8 1539 aa16.86■□□□□ 0.29
TMC6-217ENST00000590934 ANKRD30BQ9BXX2 1392 aa16.86■□□□□ 0.29
TMC6-217ENST00000590934 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
TMC6-217ENST00000590934 SCAPERQ9BY12 1400 aa16.85■□□□□ 0.29
TMC6-217ENST00000590934 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
TMC6-217ENST00000590934 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
TMC6-217ENST00000590934 PTPRMP28827 1452 aa16.84■□□□□ 0.29
TMC6-217ENST00000590934 NEO1Q92859 1461 aa16.84■□□□□ 0.29
TMC6-217ENST00000590934 ZNF316A6NFI3 1004 aaPredicted RBP16.83■□□□□ 0.28
TMC6-217ENST00000590934 UNC13BO14795 1591 aa16.83■□□□□ 0.28
TMC6-217ENST00000590934 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
TMC6-217ENST00000590934 INO80Q9ULG1 1556 aaPredicted RBP16.83■□□□□ 0.28
TMC6-217ENST00000590934 MAGI2Q86UL8 1455 aa16.82■□□□□ 0.28
TMC6-217ENST00000590934 NUP155O75694 1391 aa16.82■□□□□ 0.28
TMC6-217ENST00000590934 ARID4BQ4LE39 1312 aaPredicted RBP16.82■□□□□ 0.28
TMC6-217ENST00000590934 BCORL1Q5H9F3 1711 aa16.82■□□□□ 0.28
TMC6-217ENST00000590934 TONSLQ96HA7 1378 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms