RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 PHLDB1Q86UU1 1377 aa26.38■■□□□ 1.81
RPRD1A-209ENST00000590898 PPARGC1BQ86YN6 1023 aaKnown RBP26.37■■□□□ 1.81
RPRD1A-209ENST00000590898 NEO1Q92859 1461 aa26.37■■□□□ 1.81
RPRD1A-209ENST00000590898 CFDP1Q9UEE9 299 aaPredicted RBP26.36■■□□□ 1.81
RPRD1A-209ENST00000590898 FANCAO15360 1455 aa26.36■■□□□ 1.81
RPRD1A-209ENST00000590898 ARHGAP5Q13017 1502 aa26.35■■□□□ 1.81
RPRD1A-209ENST00000590898 CFAP74Q9C0B2 1584 aa26.35■■□□□ 1.81
RPRD1A-209ENST00000590898 MYOM3Q5VTT5 1437 aa26.34■■□□□ 1.81
RPRD1A-209ENST00000590898 MIA2Q96PC5 1412 aa26.32■■□□□ 1.8
RPRD1A-209ENST00000590898 AKNAQ7Z591 1439 aa26.3■■□□□ 1.8
RPRD1A-209ENST00000590898 ZNF777Q9ULD5 760 aaPredicted RBP26.25■■□□□ 1.79
RPRD1A-209ENST00000590898 FGD6Q6ZV73 1430 aa26.24■■□□□ 1.79
RPRD1A-209ENST00000590898 PLEKHH2Q8IVE3 1493 aa26.23■■□□□ 1.79
RPRD1A-209ENST00000590898 SAMD9LQ8IVG5 1584 aa26.22■■□□□ 1.79
RPRD1A-209ENST00000590898 KIAA1107Q9UPP5 1409 aa26.22■■□□□ 1.79
RPRD1A-209ENST00000590898 ADGRL1O94910 1474 aa26.22■■□□□ 1.79
RPRD1A-209ENST00000590898 ZNF644Q9H582 1327 aaPredicted RBP26.19■■□□□ 1.78
RPRD1A-209ENST00000590898 SCAPERQ9BY12 1400 aa26.19■■□□□ 1.78
RPRD1A-209ENST00000590898 ABCC1P33527 1531 aa26.19■■□□□ 1.78
RPRD1A-209ENST00000590898 PTPN23Q9H3S7 1636 aa26.18■■□□□ 1.78
RPRD1A-209ENST00000590898 CAMSAP2Q08AD1 1489 aa26.17■■□□□ 1.78
RPRD1A-209ENST00000590898 DENND4BO75064 1496 aaPredicted RBP26.16■■□□□ 1.78
RPRD1A-209ENST00000590898 RSPH4AQ5TD94 716 aa26.16■■□□□ 1.78
RPRD1A-209ENST00000590898 TCOF1Q13428 1488 aaKnown RBP26.16■■□□□ 1.78
RPRD1A-209ENST00000590898 COL17A1Q9UMD9 1497 aaPredicted RBP26.16■■□□□ 1.78
RPRD1A-209ENST00000590898 KDM6BO15054 1643 aa26.15■■□□□ 1.78
RPRD1A-209ENST00000590898 ARHGEF12Q9NZN5 1544 aa26.14■■□□□ 1.78
RPRD1A-209ENST00000590898 HNRNPMP52272 730 aaKnown RBP eCLIP26.14■■□□□ 1.779e-6■■■■□ 22.2
RPRD1A-209ENST00000590898 RRBP1Q9P2E9 1410 aaKnown RBP26.13■■□□□ 1.77
RPRD1A-209ENST00000590898 MBD5Q9P267 1494 aa26.12■■□□□ 1.77
RPRD1A-209ENST00000590898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.12■■□□□ 1.77
RPRD1A-209ENST00000590898 SYCP2Q9BX26 1530 aa26.12■■□□□ 1.77
RPRD1A-209ENST00000590898 RICTORQ6R327 1708 aa26.11■■□□□ 1.77
RPRD1A-209ENST00000590898 RAPGEF3O95398 923 aa26.1■■□□□ 1.77
RPRD1A-209ENST00000590898 POGZQ7Z3K3 1410 aa26.1■■□□□ 1.77
RPRD1A-209ENST00000590898 ZNF518AQ6AHZ1 1483 aa26.1■■□□□ 1.77
RPRD1A-209ENST00000590898 ARHGEF5Q12774 1597 aa26.09■■□□□ 1.77
RPRD1A-209ENST00000590898 TRAPPC8Q9Y2L5 1435 aa26.08■■□□□ 1.77
RPRD1A-209ENST00000590898 FAM50AQ14320 339 aaKnown RBP26.07■■□□□ 1.76
RPRD1A-209ENST00000590898 AFAP1Q8N556 730 aa26.07■■□□□ 1.76
RPRD1A-209ENST00000590898 FRMPD1Q5SYB0 1578 aa26.05■■□□□ 1.76
RPRD1A-209ENST00000590898 KDM5CP41229 1560 aa26.04■■□□□ 1.76
RPRD1A-209ENST00000590898 CCDC141Q6ZP82 1450 aa26.04■■□□□ 1.76
RPRD1A-209ENST00000590898 ZMYM4Q5VZL5 1548 aa26.02■■□□□ 1.76
RPRD1A-209ENST00000590898 TSPY4P0CV99 314 aa26.01■■□□□ 1.75
RPRD1A-209ENST00000590898 TSPY10P0CW01 314 aa26.01■■□□□ 1.75
RPRD1A-209ENST00000590898 DNMT1P26358 1616 aaKnown RBP26■■□□□ 1.75
RPRD1A-209ENST00000590898 MAGI2Q86UL8 1455 aa26■■□□□ 1.75
RPRD1A-209ENST00000590898 MLH3Q9UHC1 1453 aa25.99■■□□□ 1.75
RPRD1A-209ENST00000590898 ABCC5O15440 1437 aa25.99■■□□□ 1.75
RPRD1A-209ENST00000590898 SPAG9O60271 1321 aaKnown RBP25.98■■□□□ 1.75
RPRD1A-209ENST00000590898 DAPK1P53355 1430 aa25.97■■□□□ 1.75
RPRD1A-209ENST00000590898 RTEL1-TNFRSF6BF6WH68 1400 aa25.97■■□□□ 1.75
RPRD1A-209ENST00000590898 HECW2Q9P2P5 1572 aa25.95■■□□□ 1.74
RPRD1A-209ENST00000590898 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
RPRD1A-209ENST00000590898 MAST1Q9Y2H9 1570 aa25.93■■□□□ 1.74
RPRD1A-209ENST00000590898 CROCC2H7BZ55 1655 aa25.93■■□□□ 1.74
RPRD1A-209ENST00000590898 KIDINS220Q9ULH0 1771 aa25.93■■□□□ 1.74
RPRD1A-209ENST00000590898 INO80Q9ULG1 1556 aaPredicted RBP25.91■■□□□ 1.74
RPRD1A-209ENST00000590898 MYT1LQ9UL68 1186 aa25.9■■□□□ 1.74
RPRD1A-209ENST00000590898 C9orf84Q5VXU9 1444 aa25.9■■□□□ 1.74
RPRD1A-209ENST00000590898 ATP7AQ04656 1500 aa25.9■■□□□ 1.74
RPRD1A-209ENST00000590898 ZFYVE16Q7Z3T8 1539 aa25.89■■□□□ 1.73
RPRD1A-209ENST00000590898 PTPRKQ15262 1439 aa25.86■■□□□ 1.73
RPRD1A-209ENST00000590898 YEATS2Q9ULM3 1422 aa25.86■■□□□ 1.73
RPRD1A-209ENST00000590898 PCGF6Q9BYE7 350 aa25.85■■□□□ 1.73
RPRD1A-209ENST00000590898 ITGAEP38570 1179 aa25.84■■□□□ 1.73
RPRD1A-209ENST00000590898 ARHGEF40Q8TER5 1519 aa25.84■■□□□ 1.73
RPRD1A-209ENST00000590898 ATP10AO60312 1499 aa25.83■■□□□ 1.73
RPRD1A-209ENST00000590898 ADGRL2O95490 1459 aa25.83■■□□□ 1.73
RPRD1A-209ENST00000590898 CHIC2Q9UKJ5 165 aa25.83■■□□□ 1.73
RPRD1A-209ENST00000590898 ANKRD30AQ9BXX3 1397 aa25.83■■□□□ 1.72
RPRD1A-209ENST00000590898 NCOA1Q15788 1441 aa25.82■■□□□ 1.72
RPRD1A-209ENST00000590898 ADGBQ8N7X0 1667 aa25.82■■□□□ 1.72
RPRD1A-209ENST00000590898 ABCA6Q8N139 1617 aa25.82■■□□□ 1.72
RPRD1A-209ENST00000590898 PLXNC1O60486 1568 aa25.82■■□□□ 1.72
RPRD1A-209ENST00000590898 DIP2CQ9Y2E4 1556 aa25.82■■□□□ 1.72
RPRD1A-209ENST00000590898 ROCK1Q13464 1354 aa25.81■■□□□ 1.72
RPRD1A-209ENST00000590898 REREQ9P2R6 1566 aa25.78■■□□□ 1.72
RPRD1A-209ENST00000590898 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
RPRD1A-209ENST00000590898 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
RPRD1A-209ENST00000590898 RRP7BPQ9NSQ0 103 aa25.75■■□□□ 1.71
RPRD1A-209ENST00000590898 A2MP01023 1474 aa25.75■■□□□ 1.71
RPRD1A-209ENST00000590898 KIF15Q9NS87 1388 aa25.75■■□□□ 1.71
RPRD1A-209ENST00000590898 DUOX2Q9NRD8 1548 aa25.73■■□□□ 1.71
RPRD1A-209ENST00000590898 AGLP35573 1532 aa25.69■■□□□ 1.7
RPRD1A-209ENST00000590898 ERBINQ96RT1 1412 aa25.66■■□□□ 1.7
RPRD1A-209ENST00000590898 HFM1A2PYH4 1435 aa25.65■■□□□ 1.7
RPRD1A-209ENST00000590898 ANKRD50Q9ULJ7 1429 aa25.65■■□□□ 1.7
RPRD1A-209ENST00000590898 SIGLEC1Q9BZZ2 1709 aa25.64■■□□□ 1.7
RPRD1A-209ENST00000590898 BCORL1Q5H9F3 1711 aa25.64■■□□□ 1.69
RPRD1A-209ENST00000590898 NAIPQ13075 1403 aa25.64■■□□□ 1.69
RPRD1A-209ENST00000590898 EIF2AK4Q9P2K8 1649 aaKnown RBP25.64■■□□□ 1.69
RPRD1A-209ENST00000590898 ARID4BQ4LE39 1312 aaPredicted RBP25.63■■□□□ 1.69
RPRD1A-209ENST00000590898 GCC2Q8IWJ2 1684 aa25.61■■□□□ 1.69
RPRD1A-209ENST00000590898 KIF3BO15066 747 aa25.61■■□□□ 1.69
RPRD1A-209ENST00000590898 PPP6R1Q9UPN7 881 aa25.57■■□□□ 1.68
RPRD1A-209ENST00000590898 SETD5Q9C0A6 1442 aa25.54■■□□□ 1.68
RPRD1A-209ENST00000590898 RNF17Q9BXT8 1623 aaKnown RBP25.54■■□□□ 1.68
RPRD1A-209ENST00000590898 GGT6Q6P531 493 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms