RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 RICTORQ6R327 1708 aa35.6■■■■□ 3.29
MBD3-208ENST00000590830 MTUS2Q5JR59 1369 aa35.59■■■■□ 3.29
MBD3-208ENST00000590830 CDC42BPBQ9Y5S2 1711 aa35.56■■■■□ 3.28
MBD3-208ENST00000590830 POGZQ7Z3K3 1410 aa35.55■■■■□ 3.28
MBD3-208ENST00000590830 GPATCH8Q9UKJ3 1502 aaKnown RBP35.53■■■■□ 3.28
MBD3-208ENST00000590830 PREX2Q70Z35 1606 aa35.53■■■■□ 3.28
MBD3-208ENST00000590830 ZMYM4Q5VZL5 1548 aa35.49■■■■□ 3.27
MBD3-208ENST00000590830 AFAP1Q8N556 730 aa35.49■■■■□ 3.27
MBD3-208ENST00000590830 CDC42BPAQ5VT25 1732 aa35.49■■■■□ 3.27
MBD3-208ENST00000590830 YEATS2Q9ULM3 1422 aa35.47■■■■□ 3.27
MBD3-208ENST00000590830 ARHGEF12Q9NZN5 1544 aa35.46■■■■□ 3.27
MBD3-208ENST00000590830 EHBP1L1Q8N3D4 1523 aa35.45■■■■□ 3.27
MBD3-208ENST00000590830 CCNB3Q8WWL7 1395 aa35.44■■■■□ 3.26
MBD3-208ENST00000590830 MAGI2Q86UL8 1455 aa35.43■■■■□ 3.26
MBD3-208ENST00000590830 ZNF777Q9ULD5 760 aaPredicted RBP35.43■■■■□ 3.26
MBD3-208ENST00000590830 TIAM1Q13009 1591 aa35.42■■■■□ 3.26
MBD3-208ENST00000590830 ARHGEF40Q8TER5 1519 aa35.42■■■■□ 3.26
MBD3-208ENST00000590830 CFDP1Q9UEE9 299 aaPredicted RBP35.4■■■■□ 3.26
MBD3-208ENST00000590830 TRAPPC8Q9Y2L5 1435 aa35.4■■■■□ 3.26
MBD3-208ENST00000590830 ZFYVE16Q7Z3T8 1539 aa35.39■■■■□ 3.26
MBD3-208ENST00000590830 ZNF518AQ6AHZ1 1483 aa35.39■■■■□ 3.26
MBD3-208ENST00000590830 ABCC1P33527 1531 aa35.38■■■■□ 3.25
MBD3-208ENST00000590830 KANK4Q5T7N3 995 aaPredicted RBP35.36■■■■□ 3.25
MBD3-208ENST00000590830 ARID4BQ4LE39 1312 aaPredicted RBP35.34■■■■□ 3.25
MBD3-208ENST00000590830 SAMD9LQ8IVG5 1584 aa35.34■■■■□ 3.25
MBD3-208ENST00000590830 KDM5CP41229 1560 aa35.34■■■■□ 3.25
MBD3-208ENST00000590830 HNRNPMP52272 730 aaKnown RBP eCLIP35.33■■■■□ 3.25
MBD3-208ENST00000590830 LRRC9Q6ZRR7 1453 aa35.33■■■■□ 3.25
MBD3-208ENST00000590830 NCOA2Q15596 1464 aa35.32■■■■□ 3.24
MBD3-208ENST00000590830 MAP3K1Q13233 1512 aa35.32■■■■□ 3.24
MBD3-208ENST00000590830 ZNF644Q9H582 1327 aaPredicted RBP35.31■■■■□ 3.24
MBD3-208ENST00000590830 ITSN2Q9NZM3 1697 aa35.28■■■■□ 3.24
MBD3-208ENST00000590830 ATP10AO60312 1499 aa35.28■■■■□ 3.24
MBD3-208ENST00000590830 SIGLEC1Q9BZZ2 1709 aa35.26■■■■□ 3.24
MBD3-208ENST00000590830 MLH3Q9UHC1 1453 aa35.26■■■■□ 3.23
MBD3-208ENST00000590830 KIAA1107Q9UPP5 1409 aa35.25■■■■□ 3.23
MBD3-208ENST00000590830 SYCP2Q9BX26 1530 aa35.24■■■■□ 3.23
MBD3-208ENST00000590830 MYT1LQ9UL68 1186 aa35.24■■■■□ 3.23
MBD3-208ENST00000590830 SUPT6HQ7KZ85 1726 aaKnown RBP35.23■■■■□ 3.23
MBD3-208ENST00000590830 ADAMTSL3P82987 1691 aa35.22■■■■□ 3.23
MBD3-208ENST00000590830 PLEKHH2Q8IVE3 1493 aa35.21■■■■□ 3.23
MBD3-208ENST00000590830 HECW2Q9P2P5 1572 aa35.21■■■■□ 3.23
MBD3-208ENST00000590830 BCORL1Q5H9F3 1711 aa35.2■■■■□ 3.23
MBD3-208ENST00000590830 C9orf84Q5VXU9 1444 aa35.19■■■■□ 3.22
MBD3-208ENST00000590830 DIP2CQ9Y2E4 1556 aa35.15■■■■□ 3.22
MBD3-208ENST00000590830 MBD5Q9P267 1494 aa35.15■■■■□ 3.22
MBD3-208ENST00000590830 SPAG9O60271 1321 aaKnown RBP35.14■■■■□ 3.22
MBD3-208ENST00000590830 APLP2Q06481 763 aa35.14■■■■□ 3.22
MBD3-208ENST00000590830 MLECQ14165 292 aa35.14■■■■□ 3.22
MBD3-208ENST00000590830 ABCA6Q8N139 1617 aa35.12■■■■□ 3.21
MBD3-208ENST00000590830 KIDINS220Q9ULH0 1771 aa35.12■■■■□ 3.21
MBD3-208ENST00000590830 PTPRMP28827 1452 aa35.09■■■■□ 3.21
MBD3-208ENST00000590830 MADDQ8WXG6 1647 aa35.09■■■■□ 3.21
MBD3-208ENST00000590830 CAMSAP2Q08AD1 1489 aa35.05■■■■□ 3.2
MBD3-208ENST00000590830 REREQ9P2R6 1566 aa35.04■■■■□ 3.2
MBD3-208ENST00000590830 ATP7AQ04656 1500 aa35■■■■□ 3.19
MBD3-208ENST00000590830 MYOM3Q5VTT5 1437 aa34.99■■■■□ 3.19
MBD3-208ENST00000590830 INO80Q9ULG1 1556 aaPredicted RBP34.98■■■■□ 3.19
MBD3-208ENST00000590830 AGLP35573 1532 aa34.96■■■■□ 3.19
MBD3-208ENST00000590830 RIMS1Q86UR5 1692 aaKnown RBP34.95■■■■□ 3.19
MBD3-208ENST00000590830 RSPH4AQ5TD94 716 aa34.95■■■■□ 3.19
MBD3-208ENST00000590830 MIA2Q96PC5 1412 aa34.95■■■■□ 3.19
MBD3-208ENST00000590830 CCDC141Q6ZP82 1450 aa34.93■■■■□ 3.18
MBD3-208ENST00000590830 RTEL1-TNFRSF6BF6WH68 1400 aa34.92■■■■□ 3.18
MBD3-208ENST00000590830 A2MP01023 1474 aa34.89■■■■□ 3.18
MBD3-208ENST00000590830 PLPPR3Q6T4P5 718 aa34.88■■■■□ 3.17
MBD3-208ENST00000590830 ARHGEF5Q12774 1597 aa34.87■■■■□ 3.17
MBD3-208ENST00000590830 FER1L4A9Z1Z3 1794 aa34.85■■■■□ 3.17
MBD3-208ENST00000590830 TSPY4P0CV99 314 aa34.83■■■■□ 3.17
MBD3-208ENST00000590830 TSPY10P0CW01 314 aa34.83■■■■□ 3.17
MBD3-208ENST00000590830 PLXNC1O60486 1568 aa34.83■■■■□ 3.17
MBD3-208ENST00000590830 CEBPAP49715 358 aaPredicted RBP34.82■■■■□ 3.16
MBD3-208ENST00000590830 DHX29Q7Z478 1369 aaKnown RBP34.79■■■■□ 3.16
MBD3-208ENST00000590830 FGD6Q6ZV73 1430 aa34.78■■■■□ 3.16
MBD3-208ENST00000590830 ADGBQ8N7X0 1667 aa34.75■■■■□ 3.15
MBD3-208ENST00000590830 PTPN23Q9H3S7 1636 aa34.73■■■■□ 3.15
MBD3-208ENST00000590830 GGT6Q6P531 493 aa34.72■■■■□ 3.15
MBD3-208ENST00000590830 TCOF1Q13428 1488 aaKnown RBP34.71■■■■□ 3.15
MBD3-208ENST00000590830 ESF1Q9H501 851 aaKnown RBP34.71■■■■□ 3.15
MBD3-208ENST00000590830 ABCC5O15440 1437 aa34.71■■■■□ 3.15
MBD3-208ENST00000590830 MAST1Q9Y2H9 1570 aa34.69■■■■□ 3.14
MBD3-208ENST00000590830 PPARGC1BQ86YN6 1023 aaKnown RBP34.68■■■■□ 3.14
MBD3-208ENST00000590830 LMTK3Q96Q04 1460 aa34.66■■■■□ 3.14
MBD3-208ENST00000590830 KIF3BO15066 747 aa34.65■■■■□ 3.14
MBD3-208ENST00000590830 CNTLNQ9NXG0 1405 aa34.64■■■■□ 3.14
MBD3-208ENST00000590830 DAPK1P53355 1430 aa34.61■■■■□ 3.13
MBD3-208ENST00000590830 ZMYM3Q14202 1370 aa34.61■■■■□ 3.13
MBD3-208ENST00000590830 PPP6R1Q9UPN7 881 aa34.6■■■■□ 3.13
MBD3-208ENST00000590830 C3P01024 1663 aa34.59■■■■□ 3.13
MBD3-208ENST00000590830 HSPA2P54652 639 aa34.56■■■■□ 3.12
MBD3-208ENST00000590830 FAM50AQ14320 339 aaKnown RBP34.56■■■■□ 3.12
MBD3-208ENST00000590830 SHANK2Q9UPX8 1470 aa34.56■■■■□ 3.12
MBD3-208ENST00000590830 DNMT1P26358 1616 aaKnown RBP34.55■■■■□ 3.12
MBD3-208ENST00000590830 RRP7BPQ9NSQ0 103 aa34.53■■■■□ 3.12
MBD3-208ENST00000590830 CHIC2Q9UKJ5 165 aa34.53■■■■□ 3.12
MBD3-208ENST00000590830 CLTCQ00610 1675 aaKnown RBP34.52■■■■□ 3.12
MBD3-208ENST00000590830 CROCC2H7BZ55 1655 aa34.5■■■■□ 3.11
MBD3-208ENST00000590830 MROH2AA6NES4 1674 aa34.5■■■■□ 3.11
MBD3-208ENST00000590830 KIF15Q9NS87 1388 aa34.49■■■■□ 3.11
MBD3-208ENST00000590830 DUOX2Q9NRD8 1548 aa34.46■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms