RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.85□□□□□ -0.51
CCDC58P3-201ENST00000590792 POTEMA6NI47 508 aa11.83□□□□□ -0.52
CCDC58P3-201ENST00000590792 TMEM92Q6UXU6 159 aa11.83□□□□□ -0.52
CCDC58P3-201ENST00000590792 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
CCDC58P3-201ENST00000590792 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
CCDC58P3-201ENST00000590792 SLAIN1Q8ND83 568 aa11.79□□□□□ -0.52
CCDC58P3-201ENST00000590792 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
CCDC58P3-201ENST00000590792 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
CCDC58P3-201ENST00000590792 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
CCDC58P3-201ENST00000590792 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
CCDC58P3-201ENST00000590792 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
CCDC58P3-201ENST00000590792 KIF3CO14782 793 aa11.75□□□□□ -0.53
CCDC58P3-201ENST00000590792 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
CCDC58P3-201ENST00000590792 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
CCDC58P3-201ENST00000590792 PDE4AP27815 886 aa11.74□□□□□ -0.53
CCDC58P3-201ENST00000590792 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
CCDC58P3-201ENST00000590792 FAM163AQ96GL9 167 aaPredicted RBP11.73□□□□□ -0.53
CCDC58P3-201ENST00000590792 DSG2Q14126 1118 aa11.71□□□□□ -0.53
CCDC58P3-201ENST00000590792 DDX27Q96GQ7 796 aaKnown RBP11.7□□□□□ -0.54
CCDC58P3-201ENST00000590792 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
CCDC58P3-201ENST00000590792 PPP1R15BQ5SWA1 713 aa11.69□□□□□ -0.54
CCDC58P3-201ENST00000590792 FOXK1P85037 733 aa11.68□□□□□ -0.54
CCDC58P3-201ENST00000590792 MFSD10Q14728 455 aa11.68□□□□□ -0.54
CCDC58P3-201ENST00000590792 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
CCDC58P3-201ENST00000590792 WDR70Q9NW82 654 aa11.67□□□□□ -0.54
CCDC58P3-201ENST00000590792 PLPP6Q8IY26 295 aa11.66□□□□□ -0.54
CCDC58P3-201ENST00000590792 SNPHO15079 494 aa11.64□□□□□ -0.55
CCDC58P3-201ENST00000590792 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
CCDC58P3-201ENST00000590792 ST18O60284 1047 aa11.59□□□□□ -0.55
CCDC58P3-201ENST00000590792 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
CCDC58P3-201ENST00000590792 E2F4Q16254 413 aa11.56□□□□□ -0.56
CCDC58P3-201ENST00000590792 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
CCDC58P3-201ENST00000590792 UPF1Q92900 1129 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC58P3-201ENST00000590792 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
CCDC58P3-201ENST00000590792 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
CCDC58P3-201ENST00000590792 KCNV2Q8TDN2 545 aa11.53□□□□□ -0.56
CCDC58P3-201ENST00000590792 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
CCDC58P3-201ENST00000590792 SLC34A2O95436 690 aa11.5□□□□□ -0.57
CCDC58P3-201ENST00000590792 RIMBP2O15034 1052 aa11.49□□□□□ -0.57
CCDC58P3-201ENST00000590792 P3H3Q8IVL6 736 aa11.48□□□□□ -0.57
CCDC58P3-201ENST00000590792 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
CCDC58P3-201ENST00000590792 PTCD2Q8WV60 388 aaKnown RBP11.48□□□□□ -0.57
CCDC58P3-201ENST00000590792 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
CCDC58P3-201ENST00000590792 DPYSL4O14531 572 aa11.47□□□□□ -0.57
CCDC58P3-201ENST00000590792 CDAN1Q8IWY9 1227 aa11.47□□□□□ -0.57
CCDC58P3-201ENST00000590792 ARSIQ5FYB1 569 aa11.46□□□□□ -0.57
CCDC58P3-201ENST00000590792 KHSRPQ92945 711 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC58P3-201ENST00000590792 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
CCDC58P3-201ENST00000590792 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
CCDC58P3-201ENST00000590792 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
CCDC58P3-201ENST00000590792 TBC1D12O60347 775 aa11.42□□□□□ -0.58
CCDC58P3-201ENST00000590792 NUDT7P0C024 238 aa11.41□□□□□ -0.58
CCDC58P3-201ENST00000590792 ARHGEF1Q92888 912 aaKnown RBP11.41□□□□□ -0.58
CCDC58P3-201ENST00000590792 HOXB1P14653 301 aaPredicted RBP11.4□□□□□ -0.58
CCDC58P3-201ENST00000590792 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
CCDC58P3-201ENST00000590792 EVI5O60447 810 aa11.38□□□□□ -0.59
CCDC58P3-201ENST00000590792 MARVELD3Q96A59 401 aa11.38□□□□□ -0.59
CCDC58P3-201ENST00000590792 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
CCDC58P3-201ENST00000590792 EMP3P54852 163 aa11.36□□□□□ -0.59
CCDC58P3-201ENST00000590792 PDIA6Q15084 440 aa11.36□□□□□ -0.59
CCDC58P3-201ENST00000590792 KDM4FA0A1W2PPD8 638 aa11.34□□□□□ -0.59
CCDC58P3-201ENST00000590792 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
CCDC58P3-201ENST00000590792 LHX6Q9UPM6 363 aa11.31□□□□□ -0.6
CCDC58P3-201ENST00000590792 SEMA3EO15041 775 aa11.3□□□□□ -0.6
CCDC58P3-201ENST00000590792 NBR1Q14596 966 aa11.29□□□□□ -0.6
CCDC58P3-201ENST00000590792 DDX12PQ92771 950 aa11.29□□□□□ -0.6
CCDC58P3-201ENST00000590792 ANO8Q9HCE9 1232 aaPredicted RBP11.29□□□□□ -0.6
CCDC58P3-201ENST00000590792 ERBB3P21860 1342 aa11.28□□□□□ -0.6
CCDC58P3-201ENST00000590792 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
CCDC58P3-201ENST00000590792 HS3ST6Q96QI5 342 aa11.27□□□□□ -0.61
CCDC58P3-201ENST00000590792 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
CCDC58P3-201ENST00000590792 GRXCR2A6NFK2 248 aa11.25□□□□□ -0.61
CCDC58P3-201ENST00000590792 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
CCDC58P3-201ENST00000590792 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
CCDC58P3-201ENST00000590792 PTGER2P43116 358 aa11.23□□□□□ -0.61
CCDC58P3-201ENST00000590792 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
CCDC58P3-201ENST00000590792 FOSBP53539 338 aa11.22□□□□□ -0.61
CCDC58P3-201ENST00000590792 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
CCDC58P3-201ENST00000590792 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
CCDC58P3-201ENST00000590792 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
CCDC58P3-201ENST00000590792 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
CCDC58P3-201ENST00000590792 PSDA5PKW4 1024 aaPredicted RBP11.19□□□□□ -0.62
CCDC58P3-201ENST00000590792 PHF14O94880 888 aa11.19□□□□□ -0.62
CCDC58P3-201ENST00000590792 PPP4R3BQ5MIZ7 849 aa11.19□□□□□ -0.62
CCDC58P3-201ENST00000590792 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
CCDC58P3-201ENST00000590792 BCANQ96GW7 911 aa11.18□□□□□ -0.62
CCDC58P3-201ENST00000590792 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
CCDC58P3-201ENST00000590792 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
CCDC58P3-201ENST00000590792 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
CCDC58P3-201ENST00000590792 KRTAP3-3Q9BYR6 98 aa11.17□□□□□ -0.62
CCDC58P3-201ENST00000590792 KRTAP3-2Q9BYR7 98 aa11.17□□□□□ -0.62
CCDC58P3-201ENST00000590792 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
CCDC58P3-201ENST00000590792 OSBPP22059 807 aa11.15□□□□□ -0.62
CCDC58P3-201ENST00000590792 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
CCDC58P3-201ENST00000590792 EPAS1Q99814 870 aa11.15□□□□□ -0.62
CCDC58P3-201ENST00000590792 ADAM33Q9BZ11 813 aa11.15□□□□□ -0.62
CCDC58P3-201ENST00000590792 ABCC9O60706 1549 aa11.14□□□□□ -0.63
CCDC58P3-201ENST00000590792 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
CCDC58P3-201ENST00000590792 MAP3K7O43318 606 aa11.12□□□□□ -0.63
CCDC58P3-201ENST00000590792 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms