RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
NPC1-209ENST00000590723 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
NPC1-209ENST00000590723 FAM163AQ96GL9 167 aaPredicted RBP16.23■□□□□ 0.19
NPC1-209ENST00000590723 DOK7Q18PE1 504 aa16.22■□□□□ 0.19
NPC1-209ENST00000590723 C2orf72A6NCS6 295 aa16.21■□□□□ 0.19
NPC1-209ENST00000590723 KIF3CO14782 793 aa16.2■□□□□ 0.18
NPC1-209ENST00000590723 RIMBP2O15034 1052 aa16.2■□□□□ 0.18
NPC1-209ENST00000590723 GPHNQ9NQX3 736 aaPredicted RBP16.17■□□□□ 0.18
NPC1-209ENST00000590723 PDE4AP27815 886 aa16.16■□□□□ 0.18
NPC1-209ENST00000590723 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
NPC1-209ENST00000590723 FOXK1P85037 733 aa16.11■□□□□ 0.17
NPC1-209ENST00000590723 ST18O60284 1047 aa16.1■□□□□ 0.17
NPC1-209ENST00000590723 CRISPLD2Q9H0B8 497 aa16.1■□□□□ 0.17
NPC1-209ENST00000590723 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
NPC1-209ENST00000590723 HOXB3P14651 431 aaPredicted RBP16.09■□□□□ 0.17
NPC1-209ENST00000590723 PLPP6Q8IY26 295 aa16.04■□□□□ 0.16
NPC1-209ENST00000590723 NCKAP5LQ9HCH0 1330 aa16.03■□□□□ 0.16
NPC1-209ENST00000590723 DSG2Q14126 1118 aa16.03■□□□□ 0.16
NPC1-209ENST00000590723 LARP6Q9BRS8 491 aaKnown RBP16.03■□□□□ 0.16
NPC1-209ENST00000590723 SLC34A2O95436 690 aa16.02■□□□□ 0.16
NPC1-209ENST00000590723 DDX27Q96GQ7 796 aaKnown RBP16.02■□□□□ 0.16
NPC1-209ENST00000590723 PPP1R15BQ5SWA1 713 aa16.01■□□□□ 0.15
NPC1-209ENST00000590723 LCE2DQ5TA82 110 aaPredicted RBP16■□□□□ 0.15
NPC1-209ENST00000590723 HOXB1P14653 301 aaPredicted RBP15.99■□□□□ 0.15
NPC1-209ENST00000590723 CADPS2Q86UW7 1296 aa15.98■□□□□ 0.15
NPC1-209ENST00000590723 POTEMA6NI47 508 aa15.97■□□□□ 0.15
NPC1-209ENST00000590723 PLCB2Q00722 1185 aa15.97■□□□□ 0.15
NPC1-209ENST00000590723 MFSD10Q14728 455 aa15.96■□□□□ 0.15
NPC1-209ENST00000590723 POTEGQ6S5H5 508 aa15.96■□□□□ 0.15
NPC1-209ENST00000590723 EMP3P54852 163 aa15.95■□□□□ 0.14
NPC1-209ENST00000590723 TBC1D12O60347 775 aa15.94■□□□□ 0.14
NPC1-209ENST00000590723 GPR153Q6NV75 609 aa15.91■□□□□ 0.14
NPC1-209ENST00000590723 PTCD2Q8WV60 388 aaKnown RBP15.91■□□□□ 0.14
NPC1-209ENST00000590723 MARVELD3Q96A59 401 aa15.9■□□□□ 0.14
NPC1-209ENST00000590723 WDR70Q9NW82 654 aa15.9■□□□□ 0.14
NPC1-209ENST00000590723 PCDHGA4Q9Y5G9 962 aa15.89■□□□□ 0.13
NPC1-209ENST00000590723 ARSIQ5FYB1 569 aa15.88■□□□□ 0.13
NPC1-209ENST00000590723 TSHZ2Q9NRE2 1034 aa15.83■□□□□ 0.12
NPC1-209ENST00000590723 PCDH10Q9P2E7 1040 aa15.83■□□□□ 0.12
NPC1-209ENST00000590723 ERBB3P21860 1342 aa15.83■□□□□ 0.12
NPC1-209ENST00000590723 OXER1Q8TDS5 423 aa15.81■□□□□ 0.12
NPC1-209ENST00000590723 FAM205CA6NFA0 338 aa15.8■□□□□ 0.12
NPC1-209ENST00000590723 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
NPC1-209ENST00000590723 UPF1Q92900 1129 aaKnown RBP eCLIP15.8■□□□□ 0.12
NPC1-209ENST00000590723 NUDT7P0C024 238 aa15.79■□□□□ 0.12
NPC1-209ENST00000590723 MAP3K9P80192 1104 aa15.76■□□□□ 0.11
NPC1-209ENST00000590723 CAMK2BQ13554 666 aa15.76■□□□□ 0.11
NPC1-209ENST00000590723 KHSRPQ92945 711 aaKnown RBP eCLIP15.76■□□□□ 0.11
NPC1-209ENST00000590723 HS3ST6Q96QI5 342 aa15.76■□□□□ 0.11
NPC1-209ENST00000590723 PSDA5PKW4 1024 aaPredicted RBP15.74■□□□□ 0.11
NPC1-209ENST00000590723 HAP1P54257 671 aaPredicted RBP15.74■□□□□ 0.11
NPC1-209ENST00000590723 E2F4Q16254 413 aa15.73■□□□□ 0.11
NPC1-209ENST00000590723 VARS2Q5ST30 1063 aaKnown RBP15.71■□□□□ 0.11
NPC1-209ENST00000590723 CDAN1Q8IWY9 1227 aa15.7■□□□□ 0.1
NPC1-209ENST00000590723 EMILIN3Q9NT22 766 aa15.7■□□□□ 0.1
NPC1-209ENST00000590723 LHX6Q9UPM6 363 aa15.67■□□□□ 0.1
NPC1-209ENST00000590723 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
NPC1-209ENST00000590723 EVI5O60447 810 aa15.65■□□□□ 0.1
NPC1-209ENST00000590723 ZNF687Q8N1G0 1237 aa15.62■□□□□ 0.09
NPC1-209ENST00000590723 ANO8Q9HCE9 1232 aaPredicted RBP15.61■□□□□ 0.09
NPC1-209ENST00000590723 DPYSL4O14531 572 aa15.6■□□□□ 0.09
NPC1-209ENST00000590723 PPP4R3BQ5MIZ7 849 aa15.6■□□□□ 0.09
NPC1-209ENST00000590723 POTEB3A0JP26 581 aa15.59■□□□□ 0.09
NPC1-209ENST00000590723 POTEBQ6S5H4 581 aa15.59■□□□□ 0.09
NPC1-209ENST00000590723 P3H3Q8IVL6 736 aa15.59■□□□□ 0.09
NPC1-209ENST00000590723 ARIH1Q9Y4X5 557 aaPredicted RBP15.59■□□□□ 0.09
NPC1-209ENST00000590723 SPDYE16A6NNV3 312 aaPredicted RBP15.57■□□□□ 0.08
NPC1-209ENST00000590723 PBX2P40425 430 aa15.54■□□□□ 0.08
NPC1-209ENST00000590723 VSIG10Q8N0Z9 540 aa15.53■□□□□ 0.08
NPC1-209ENST00000590723 ZNF454Q8N9F8 522 aa15.53■□□□□ 0.08
NPC1-209ENST00000590723 JPH4Q96JJ6 628 aa15.53■□□□□ 0.08
NPC1-209ENST00000590723 KCNH8Q96L42 1107 aa15.52■□□□□ 0.08
NPC1-209ENST00000590723 PDIA6Q15084 440 aa15.51■□□□□ 0.07
NPC1-209ENST00000590723 ARHGEF1Q92888 912 aaKnown RBP15.51■□□□□ 0.07
NPC1-209ENST00000590723 FOSBP53539 338 aa15.49■□□□□ 0.07
NPC1-209ENST00000590723 PHF14O94880 888 aa15.46■□□□□ 0.07
NPC1-209ENST00000590723 PTGER2P43116 358 aa15.46■□□□□ 0.07
NPC1-209ENST00000590723 KCNV2Q8TDN2 545 aa15.45■□□□□ 0.06
NPC1-209ENST00000590723 FBXW7Q969H0 707 aa15.45■□□□□ 0.06
NPC1-209ENST00000590723 ZDHHC16Q969W1 377 aa15.45■□□□□ 0.06
NPC1-209ENST00000590723 ARHGAP33O14559 1287 aa15.44■□□□□ 0.06
NPC1-209ENST00000590723 KRTAP3-3Q9BYR6 98 aa15.44■□□□□ 0.06
NPC1-209ENST00000590723 KRTAP3-2Q9BYR7 98 aa15.44■□□□□ 0.06
NPC1-209ENST00000590723 EPAS1Q99814 870 aa15.43■□□□□ 0.06
NPC1-209ENST00000590723 TYW1BQ6NUM6 668 aa15.42■□□□□ 0.06
NPC1-209ENST00000590723 BCL2L12Q9HB09 334 aa15.41■□□□□ 0.06
NPC1-209ENST00000590723 PCDHGA10Q9Y5H3 936 aa15.39■□□□□ 0.05
NPC1-209ENST00000590723 PTPREP23469 700 aa15.38■□□□□ 0.05
NPC1-209ENST00000590723 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
NPC1-209ENST00000590723 LSM11P83369 360 aaKnown RBP eCLIP15.37■□□□□ 0.05
NPC1-209ENST00000590723 DDX12PQ92771 950 aa15.37■□□□□ 0.05
NPC1-209ENST00000590723 KCNK17Q96T54 332 aa15.35■□□□□ 0.05
NPC1-209ENST00000590723 AXIN2Q9Y2T1 843 aa15.35■□□□□ 0.05
NPC1-209ENST00000590723 NBR1Q14596 966 aa15.33■□□□□ 0.04
NPC1-209ENST00000590723 ANKRD13DQ6ZTN6 518 aa15.33■□□□□ 0.04
NPC1-209ENST00000590723 ADAM33Q9BZ11 813 aa15.33■□□□□ 0.04
NPC1-209ENST00000590723 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
NPC1-209ENST00000590723 GRXCR2A6NFK2 248 aa15.3■□□□□ 0.04
NPC1-209ENST00000590723 PSEN2P49810 448 aa15.3■□□□□ 0.04
NPC1-209ENST00000590723 TK2O00142 265 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms