RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 ARHGAP5Q13017 1502 aa30.73■■■□□ 2.51
TCF3-213ENST00000590436 CFAP74Q9C0B2 1584 aa30.7■■■□□ 2.5
TCF3-213ENST00000590436 TEX14Q8IWB6 1497 aa30.7■■■□□ 2.5
TCF3-213ENST00000590436 PPRC1Q5VV67 1664 aaKnown RBP30.69■■■□□ 2.5
TCF3-213ENST00000590436 CFDP1Q9UEE9 299 aaPredicted RBP30.68■■■□□ 2.5
TCF3-213ENST00000590436 FANCAO15360 1455 aa30.67■■■□□ 2.5
TCF3-213ENST00000590436 MIA2Q96PC5 1412 aa30.66■■■□□ 2.5
TCF3-213ENST00000590436 EFCAB2Q5VUJ9 269 aa30.66■■■□□ 2.5
TCF3-213ENST00000590436 FGD6Q6ZV73 1430 aa30.64■■■□□ 2.49
TCF3-213ENST00000590436 NEO1Q92859 1461 aa30.63■■■□□ 2.49
TCF3-213ENST00000590436 ZNF777Q9ULD5 760 aaPredicted RBP30.58■■■□□ 2.49
TCF3-213ENST00000590436 PTPN23Q9H3S7 1636 aa30.58■■■□□ 2.49
TCF3-213ENST00000590436 SAMD9LQ8IVG5 1584 aa30.58■■■□□ 2.49
TCF3-213ENST00000590436 CAMSAP2Q08AD1 1489 aa30.56■■■□□ 2.48
TCF3-213ENST00000590436 PLEKHH2Q8IVE3 1493 aa30.56■■■□□ 2.48
TCF3-213ENST00000590436 AKNAQ7Z591 1439 aa30.56■■■□□ 2.48
TCF3-213ENST00000590436 TCOF1Q13428 1488 aaKnown RBP30.53■■■□□ 2.48
TCF3-213ENST00000590436 ABCC1P33527 1531 aa30.52■■■□□ 2.48
TCF3-213ENST00000590436 ADGRL1O94910 1474 aa30.52■■■□□ 2.48
TCF3-213ENST00000590436 RRBP1Q9P2E9 1410 aaKnown RBP30.52■■■□□ 2.48
TCF3-213ENST00000590436 ZNF644Q9H582 1327 aaPredicted RBP30.49■■■□□ 2.47
TCF3-213ENST00000590436 KIAA1107Q9UPP5 1409 aa30.48■■■□□ 2.47
TCF3-213ENST00000590436 SYCP2Q9BX26 1530 aa30.47■■■□□ 2.47
TCF3-213ENST00000590436 FAM50AQ14320 339 aaKnown RBP30.46■■■□□ 2.47
TCF3-213ENST00000590436 SCAPERQ9BY12 1400 aa30.46■■■□□ 2.47
TCF3-213ENST00000590436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.43■■■□□ 2.464e-6■□□□□ 8.2
TCF3-213ENST00000590436 DENND4BO75064 1496 aaPredicted RBP30.41■■■□□ 2.46
TCF3-213ENST00000590436 ARHGEF12Q9NZN5 1544 aa30.41■■■□□ 2.46
TCF3-213ENST00000590436 ARHGEF5Q12774 1597 aa30.41■■■□□ 2.46
TCF3-213ENST00000590436 MBD5Q9P267 1494 aa30.39■■■□□ 2.46
TCF3-213ENST00000590436 HNRNPMP52272 730 aaKnown RBP eCLIP30.39■■■□□ 2.46
TCF3-213ENST00000590436 POGZQ7Z3K3 1410 aa30.38■■■□□ 2.45
TCF3-213ENST00000590436 ZNF518AQ6AHZ1 1483 aa30.37■■■□□ 2.45
TCF3-213ENST00000590436 KDM6BO15054 1643 aa30.36■■■□□ 2.45
TCF3-213ENST00000590436 DNMT1P26358 1616 aaKnown RBP30.36■■■□□ 2.45
TCF3-213ENST00000590436 RSPH4AQ5TD94 716 aa30.36■■■□□ 2.45
TCF3-213ENST00000590436 CCDC141Q6ZP82 1450 aa30.36■■■□□ 2.45
TCF3-213ENST00000590436 RICTORQ6R327 1708 aa30.36■■■□□ 2.45
TCF3-213ENST00000590436 TRAPPC8Q9Y2L5 1435 aa30.35■■■□□ 2.45
TCF3-213ENST00000590436 COL17A1Q9UMD9 1497 aaPredicted RBP30.31■■■□□ 2.44
TCF3-213ENST00000590436 CROCC2H7BZ55 1655 aa30.31■■■□□ 2.44
TCF3-213ENST00000590436 DAPK1P53355 1430 aa30.3■■■□□ 2.44
TCF3-213ENST00000590436 FRMPD1Q5SYB0 1578 aa30.3■■■□□ 2.44
TCF3-213ENST00000590436 KDM5CP41229 1560 aa30.29■■■□□ 2.44
TCF3-213ENST00000590436 RAPGEF3O95398 923 aa30.29■■■□□ 2.44
TCF3-213ENST00000590436 ABCC5O15440 1437 aa30.29■■■□□ 2.44
TCF3-213ENST00000590436 AFAP1Q8N556 730 aa30.28■■■□□ 2.44
TCF3-213ENST00000590436 SHANK2Q9UPX8 1470 aa30.26■■■□□ 2.44
TCF3-213ENST00000590436 ZMYM4Q5VZL5 1548 aa30.26■■■□□ 2.43
TCF3-213ENST00000590436 TSPY4P0CV99 314 aa30.25■■■□□ 2.43
TCF3-213ENST00000590436 TSPY10P0CW01 314 aa30.25■■■□□ 2.43
TCF3-213ENST00000590436 HECW2Q9P2P5 1572 aa30.23■■■□□ 2.43
TCF3-213ENST00000590436 MAST1Q9Y2H9 1570 aa30.23■■■□□ 2.43
TCF3-213ENST00000590436 SPAG9O60271 1321 aaKnown RBP30.22■■■□□ 2.43
TCF3-213ENST00000590436 ITGAEP38570 1179 aa30.22■■■□□ 2.43
TCF3-213ENST00000590436 C9orf84Q5VXU9 1444 aa30.22■■■□□ 2.43
TCF3-213ENST00000590436 INO80Q9ULG1 1556 aaPredicted RBP30.21■■■□□ 2.43
TCF3-213ENST00000590436 MLH3Q9UHC1 1453 aa30.2■■■□□ 2.43
TCF3-213ENST00000590436 TRIM26Q12899 539 aaPredicted RBP30.2■■■□□ 2.43
TCF3-213ENST00000590436 ATP7AQ04656 1500 aa30.19■■■□□ 2.42
TCF3-213ENST00000590436 ZFYVE16Q7Z3T8 1539 aa30.19■■■□□ 2.42
TCF3-213ENST00000590436 RTEL1-TNFRSF6BF6WH68 1400 aa30.19■■■□□ 2.42
TCF3-213ENST00000590436 MAGI2Q86UL8 1455 aa30.19■■■□□ 2.42
TCF3-213ENST00000590436 ADGBQ8N7X0 1667 aa30.17■■■□□ 2.42
TCF3-213ENST00000590436 PTPRKQ15262 1439 aa30.16■■■□□ 2.42
TCF3-213ENST00000590436 MYT1LQ9UL68 1186 aa30.16■■■□□ 2.42
TCF3-213ENST00000590436 KIDINS220Q9ULH0 1771 aa30.15■■■□□ 2.42
TCF3-213ENST00000590436 ADGRL2O95490 1459 aa30.12■■■□□ 2.41
TCF3-213ENST00000590436 CHIC2Q9UKJ5 165 aa30.12■■■□□ 2.41
TCF3-213ENST00000590436 PLXNC1O60486 1568 aa30.11■■■□□ 2.41
TCF3-213ENST00000590436 ANKRD30AQ9BXX3 1397 aa30.11■■■□□ 2.41
TCF3-213ENST00000590436 ROCK1Q13464 1354 aa30.09■■■□□ 2.41
TCF3-213ENST00000590436 ARHGEF40Q8TER5 1519 aa30.09■■■□□ 2.41
TCF3-213ENST00000590436 ABCA6Q8N139 1617 aa30.07■■■□□ 2.4
TCF3-213ENST00000590436 NCOA1Q15788 1441 aa30.06■■■□□ 2.4
TCF3-213ENST00000590436 YEATS2Q9ULM3 1422 aa30.06■■■□□ 2.4
TCF3-213ENST00000590436 DIP2CQ9Y2E4 1556 aa30.06■■■□□ 2.4
TCF3-213ENST00000590436 KIF15Q9NS87 1388 aa30.03■■■□□ 2.4
TCF3-213ENST00000590436 ATP10AO60312 1499 aa30■■■□□ 2.39
TCF3-213ENST00000590436 RRP7BPQ9NSQ0 103 aa30■■■□□ 2.39
TCF3-213ENST00000590436 DUOX2Q9NRD8 1548 aa29.99■■■□□ 2.39
TCF3-213ENST00000590436 A2MP01023 1474 aa29.97■■■□□ 2.39
TCF3-213ENST00000590436 GCC2Q8IWJ2 1684 aa29.97■■■□□ 2.39
TCF3-213ENST00000590436 HFM1A2PYH4 1435 aa29.96■■■□□ 2.39
TCF3-213ENST00000590436 REREQ9P2R6 1566 aa29.96■■■□□ 2.39
TCF3-213ENST00000590436 DHX29Q7Z478 1369 aaKnown RBP29.93■■■□□ 2.38
TCF3-213ENST00000590436 NAIPQ13075 1403 aa29.92■■■□□ 2.38
TCF3-213ENST00000590436 ERBINQ96RT1 1412 aa29.91■■■□□ 2.38
TCF3-213ENST00000590436 ANKRD50Q9ULJ7 1429 aa29.89■■■□□ 2.38
TCF3-213ENST00000590436 EIF2AK4Q9P2K8 1649 aaKnown RBP29.88■■■□□ 2.37
TCF3-213ENST00000590436 PCGF6Q9BYE7 350 aa29.87■■■□□ 2.37
TCF3-213ENST00000590436 AGLP35573 1532 aa29.86■■■□□ 2.37
TCF3-213ENST00000590436 SETD5Q9C0A6 1442 aa29.85■■■□□ 2.37
TCF3-213ENST00000590436 BCORL1Q5H9F3 1711 aa29.83■■■□□ 2.37
TCF3-213ENST00000590436 SIGLEC1Q9BZZ2 1709 aa29.81■■■□□ 2.36
TCF3-213ENST00000590436 ARID4BQ4LE39 1312 aaPredicted RBP29.77■■■□□ 2.36
TCF3-213ENST00000590436 KIF3BO15066 747 aa29.77■■■□□ 2.36
TCF3-213ENST00000590436 RNF17Q9BXT8 1623 aaKnown RBP29.76■■■□□ 2.35
TCF3-213ENST00000590436 RAB3GAP2Q9H2M9 1393 aa29.75■■■□□ 2.35
TCF3-213ENST00000590436 DEPDC5O75140 1603 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms