RNA–Protein interactions for RNA: ENST00000590249.5

GHDC-210, Transcript of GH3 domain containing, humanhuman

TSL 4

Gene GHDC, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-210ENST00000590249 ARHGAP5Q13017 1502 aa25.47■■□□□ 1.67
GHDC-210ENST00000590249 SCAPERQ9BY12 1400 aa25.46■■□□□ 1.67
GHDC-210ENST00000590249 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
GHDC-210ENST00000590249 ZFYVE16Q7Z3T8 1539 aa25.46■■□□□ 1.67
GHDC-210ENST00000590249 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
GHDC-210ENST00000590249 YEATS2Q9ULM3 1422 aa25.46■■□□□ 1.67
GHDC-210ENST00000590249 PREX2Q70Z35 1606 aa25.45■■□□□ 1.67
GHDC-210ENST00000590249 EFCAB2Q5VUJ9 269 aa25.41■■□□□ 1.66
GHDC-210ENST00000590249 MADDQ8WXG6 1647 aa25.41■■□□□ 1.66
GHDC-210ENST00000590249 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
GHDC-210ENST00000590249 HECW2Q9P2P5 1572 aa25.4■■□□□ 1.66
GHDC-210ENST00000590249 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
GHDC-210ENST00000590249 MAGI2Q86UL8 1455 aa25.4■■□□□ 1.66
GHDC-210ENST00000590249 KDM5CP41229 1560 aa25.36■■□□□ 1.65
GHDC-210ENST00000590249 ARID4BQ4LE39 1312 aaPredicted RBP25.36■■□□□ 1.65
GHDC-210ENST00000590249 PTPRMP28827 1452 aa25.35■■□□□ 1.65
GHDC-210ENST00000590249 ABCC1P33527 1531 aa25.35■■□□□ 1.65
GHDC-210ENST00000590249 ZNF518AQ6AHZ1 1483 aa25.34■■□□□ 1.65
GHDC-210ENST00000590249 RIMS1Q86UR5 1692 aaKnown RBP25.33■■□□□ 1.65
GHDC-210ENST00000590249 ITSN2Q9NZM3 1697 aa25.32■■□□□ 1.64
GHDC-210ENST00000590249 ARHGEF12Q9NZN5 1544 aa25.31■■□□□ 1.64
GHDC-210ENST00000590249 ATP10AO60312 1499 aa25.27■■□□□ 1.64
GHDC-210ENST00000590249 SAMD9LQ8IVG5 1584 aa25.27■■□□□ 1.64
GHDC-210ENST00000590249 AFAP1Q8N556 730 aa25.26■■□□□ 1.63
GHDC-210ENST00000590249 C9orf84Q5VXU9 1444 aa25.26■■□□□ 1.63
GHDC-210ENST00000590249 TRAPPC8Q9Y2L5 1435 aa25.26■■□□□ 1.63
GHDC-210ENST00000590249 GPATCH8Q9UKJ3 1502 aaKnown RBP25.26■■□□□ 1.63
GHDC-210ENST00000590249 DIP2CQ9Y2E4 1556 aa25.26■■□□□ 1.63
GHDC-210ENST00000590249 ABCA6Q8N139 1617 aa25.25■■□□□ 1.63
GHDC-210ENST00000590249 FER1L4A9Z1Z3 1794 aa25.24■■□□□ 1.63
GHDC-210ENST00000590249 EHBP1L1Q8N3D4 1523 aa25.22■■□□□ 1.63
GHDC-210ENST00000590249 MTUS2Q5JR59 1369 aa25.22■■□□□ 1.63
GHDC-210ENST00000590249 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
GHDC-210ENST00000590249 SYCP2Q9BX26 1530 aa25.21■■□□□ 1.63
GHDC-210ENST00000590249 MLH3Q9UHC1 1453 aa25.2■■□□□ 1.62
GHDC-210ENST00000590249 TIAM1Q13009 1591 aa25.19■■□□□ 1.62
GHDC-210ENST00000590249 KIDINS220Q9ULH0 1771 aa25.19■■□□□ 1.62
GHDC-210ENST00000590249 MLECQ14165 292 aa25.18■■□□□ 1.62
GHDC-210ENST00000590249 REREQ9P2R6 1566 aa25.18■■□□□ 1.62
GHDC-210ENST00000590249 CCNB3Q8WWL7 1395 aa25.16■■□□□ 1.62
GHDC-210ENST00000590249 ZNF777Q9ULD5 760 aaPredicted RBP25.15■■□□□ 1.62
GHDC-210ENST00000590249 MYT1LQ9UL68 1186 aa25.13■■□□□ 1.61
GHDC-210ENST00000590249 LMTK3Q96Q04 1460 aa25.11■■□□□ 1.61
GHDC-210ENST00000590249 VPS8Q8N3P4 1428 aa25.11■■□□□ 1.61
GHDC-210ENST00000590249 CFDP1Q9UEE9 299 aaPredicted RBP25.1■■□□□ 1.61
GHDC-210ENST00000590249 PLEKHH2Q8IVE3 1493 aa25.09■■□□□ 1.61
GHDC-210ENST00000590249 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.61
GHDC-210ENST00000590249 KIAA1107Q9UPP5 1409 aa25.08■■□□□ 1.61
GHDC-210ENST00000590249 INO80Q9ULG1 1556 aaPredicted RBP25.08■■□□□ 1.61
GHDC-210ENST00000590249 SUPT6HQ7KZ85 1726 aaKnown RBP25.08■■□□□ 1.61
GHDC-210ENST00000590249 AGLP35573 1532 aa25.07■■□□□ 1.6
GHDC-210ENST00000590249 HNRNPMP52272 730 aaKnown RBP eCLIP25.07■■□□□ 1.6
GHDC-210ENST00000590249 ATP7AQ04656 1500 aa25.06■■□□□ 1.6
GHDC-210ENST00000590249 NCOA2Q15596 1464 aa25.05■■□□□ 1.6
GHDC-210ENST00000590249 ZNF644Q9H582 1327 aaPredicted RBP25.02■■□□□ 1.6
GHDC-210ENST00000590249 SPAG9O60271 1321 aaKnown RBP25.01■■□□□ 1.59
GHDC-210ENST00000590249 MBD5Q9P267 1494 aa24.99■■□□□ 1.59
GHDC-210ENST00000590249 PLXNC1O60486 1568 aa24.98■■□□□ 1.59
GHDC-210ENST00000590249 LRRC9Q6ZRR7 1453 aa24.98■■□□□ 1.59
GHDC-210ENST00000590249 C3P01024 1663 aa24.97■■□□□ 1.59
GHDC-210ENST00000590249 PREX1Q8TCU6 1659 aa24.96■■□□□ 1.59
GHDC-210ENST00000590249 CAMSAP2Q08AD1 1489 aa24.96■■□□□ 1.59
GHDC-210ENST00000590249 CEBPAP49715 358 aaPredicted RBP24.95■■□□□ 1.58
GHDC-210ENST00000590249 MAP3K1Q13233 1512 aa24.93■■□□□ 1.58
GHDC-210ENST00000590249 ADGBQ8N7X0 1667 aa24.93■■□□□ 1.58
GHDC-210ENST00000590249 A2MP01023 1474 aa24.92■■□□□ 1.58
GHDC-210ENST00000590249 HSPA2P54652 639 aa24.92■■□□□ 1.58
GHDC-210ENST00000590249 CCDC141Q6ZP82 1450 aa24.89■■□□□ 1.57
GHDC-210ENST00000590249 KANK4Q5T7N3 995 aaPredicted RBP24.88■■□□□ 1.57
GHDC-210ENST00000590249 MROH2AA6NES4 1674 aa24.87■■□□□ 1.57
GHDC-210ENST00000590249 RTEL1-TNFRSF6BF6WH68 1400 aa24.85■■□□□ 1.57
GHDC-210ENST00000590249 CNTLNQ9NXG0 1405 aa24.85■■□□□ 1.57
GHDC-210ENST00000590249 ARHGEF5Q12774 1597 aa24.84■■□□□ 1.57
GHDC-210ENST00000590249 CLTCQ00610 1675 aaKnown RBP24.84■■□□□ 1.57
GHDC-210ENST00000590249 SETD1BQ9UPS6 1966 aaKnown RBP24.83■■□□□ 1.57
GHDC-210ENST00000590249 ESF1Q9H501 851 aaKnown RBP24.81■■□□□ 1.56
GHDC-210ENST00000590249 UHRF1BP1Q6BDS2 1440 aa24.8■■□□□ 1.56
GHDC-210ENST00000590249 ILDR1Q86SU0 546 aaPredicted RBP24.79■■□□□ 1.56
GHDC-210ENST00000590249 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
GHDC-210ENST00000590249 STRCQ7RTU9 1775 aa24.75■■□□□ 1.55
GHDC-210ENST00000590249 DHX29Q7Z478 1369 aaKnown RBP24.74■■□□□ 1.55
GHDC-210ENST00000590249 MAST1Q9Y2H9 1570 aa24.73■■□□□ 1.55
GHDC-210ENST00000590249 MIA2Q96PC5 1412 aa24.73■■□□□ 1.55
GHDC-210ENST00000590249 ZMYM3Q14202 1370 aa24.73■■□□□ 1.55
GHDC-210ENST00000590249 GGT6Q6P531 493 aa24.73■■□□□ 1.55
GHDC-210ENST00000590249 NPATQ14207 1427 aa24.71■■□□□ 1.55
GHDC-210ENST00000590249 RSPH4AQ5TD94 716 aa24.71■■□□□ 1.55
GHDC-210ENST00000590249 MYO3AQ8NEV4 1616 aa24.68■■□□□ 1.54
GHDC-210ENST00000590249 CROCC2H7BZ55 1655 aa24.67■■□□□ 1.54
GHDC-210ENST00000590249 PTPN23Q9H3S7 1636 aa24.67■■□□□ 1.54
GHDC-210ENST00000590249 PTPRKQ15262 1439 aa24.67■■□□□ 1.54
GHDC-210ENST00000590249 APLP2Q06481 763 aa24.66■■□□□ 1.54
GHDC-210ENST00000590249 ZNF142P52746 1687 aaPredicted RBP24.66■■□□□ 1.54
GHDC-210ENST00000590249 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
GHDC-210ENST00000590249 KIF3BO15066 747 aa24.64■■□□□ 1.54
GHDC-210ENST00000590249 TSPY4P0CV99 314 aa24.64■■□□□ 1.54
GHDC-210ENST00000590249 TSPY10P0CW01 314 aa24.64■■□□□ 1.54
GHDC-210ENST00000590249 FAM135AQ9P2D6 1515 aa24.62■■□□□ 1.53
GHDC-210ENST00000590249 RNF17Q9BXT8 1623 aaKnown RBP24.62■■□□□ 1.53
GHDC-210ENST00000590249 PPP6R1Q9UPN7 881 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms