RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 ADGRL1O94910 1474 aa23.12■■□□□ 1.29
CXXC1-213ENST00000590234 RAPGEF3O95398 923 aa23.12■■□□□ 1.29
CXXC1-213ENST00000590234 FRMPD1Q5SYB0 1578 aa23.12■■□□□ 1.29
CXXC1-213ENST00000590234 MAP3K1Q13233 1512 aa23.11■■□□□ 1.29
CXXC1-213ENST00000590234 RICTORQ6R327 1708 aa23.09■■□□□ 1.29
CXXC1-213ENST00000590234 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.28
CXXC1-213ENST00000590234 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.28
CXXC1-213ENST00000590234 CCNB3Q8WWL7 1395 aa23.07■■□□□ 1.28
CXXC1-213ENST00000590234 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
CXXC1-213ENST00000590234 LRRC9Q6ZRR7 1453 aa23.06■■□□□ 1.28
CXXC1-213ENST00000590234 POGZQ7Z3K3 1410 aa23.05■■□□□ 1.28
CXXC1-213ENST00000590234 APLP2Q06481 763 aa23.03■■□□□ 1.28
CXXC1-213ENST00000590234 NCOA2Q15596 1464 aa23.03■■□□□ 1.28
CXXC1-213ENST00000590234 ITSN2Q9NZM3 1697 aa23.03■■□□□ 1.28
CXXC1-213ENST00000590234 ABCC1P33527 1531 aa23.02■■□□□ 1.28
CXXC1-213ENST00000590234 ZMYM4Q5VZL5 1548 aa23.02■■□□□ 1.28
CXXC1-213ENST00000590234 CFDP1Q9UEE9 299 aaPredicted RBP23■■□□□ 1.27
CXXC1-213ENST00000590234 SAMD9LQ8IVG5 1584 aa22.99■■□□□ 1.27
CXXC1-213ENST00000590234 KANK4Q5T7N3 995 aaPredicted RBP22.99■■□□□ 1.27
CXXC1-213ENST00000590234 ZNF518AQ6AHZ1 1483 aa22.98■■□□□ 1.27
CXXC1-213ENST00000590234 ZNF777Q9ULD5 760 aaPredicted RBP22.98■■□□□ 1.27
CXXC1-213ENST00000590234 ARHGEF40Q8TER5 1519 aa22.98■■□□□ 1.27
CXXC1-213ENST00000590234 MAGI2Q86UL8 1455 aa22.96■■□□□ 1.27
CXXC1-213ENST00000590234 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
CXXC1-213ENST00000590234 KDM5CP41229 1560 aa22.95■■□□□ 1.26
CXXC1-213ENST00000590234 ZFYVE16Q7Z3T8 1539 aa22.95■■□□□ 1.26
CXXC1-213ENST00000590234 SYCP2Q9BX26 1530 aa22.93■■□□□ 1.26
CXXC1-213ENST00000590234 PLEKHH2Q8IVE3 1493 aa22.93■■□□□ 1.26
CXXC1-213ENST00000590234 AFAP1Q8N556 730 aa22.92■■□□□ 1.26
CXXC1-213ENST00000590234 TRAPPC8Q9Y2L5 1435 aa22.91■■□□□ 1.26
CXXC1-213ENST00000590234 YEATS2Q9ULM3 1422 aa22.91■■□□□ 1.26
CXXC1-213ENST00000590234 KIAA1107Q9UPP5 1409 aa22.91■■□□□ 1.26
CXXC1-213ENST00000590234 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
CXXC1-213ENST00000590234 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.26
CXXC1-213ENST00000590234 KDM4FA0A1W2PPD8 638 aa22.87■■□□□ 1.25
CXXC1-213ENST00000590234 HNRNPMP52272 730 aaKnown RBP eCLIP22.87■■□□□ 1.25
CXXC1-213ENST00000590234 ZNF644Q9H582 1327 aaPredicted RBP22.86■■□□□ 1.25
CXXC1-213ENST00000590234 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
CXXC1-213ENST00000590234 MYT1LQ9UL68 1186 aa22.85■■□□□ 1.25
CXXC1-213ENST00000590234 CAMSAP2Q08AD1 1489 aa22.85■■□□□ 1.25
CXXC1-213ENST00000590234 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
CXXC1-213ENST00000590234 ATP10AO60312 1499 aa22.83■■□□□ 1.25
CXXC1-213ENST00000590234 ARID4BQ4LE39 1312 aaPredicted RBP22.82■■□□□ 1.24
CXXC1-213ENST00000590234 DIP2CQ9Y2E4 1556 aa22.81■■□□□ 1.24
CXXC1-213ENST00000590234 ABCA6Q8N139 1617 aa22.81■■□□□ 1.24
CXXC1-213ENST00000590234 C9orf84Q5VXU9 1444 aa22.81■■□□□ 1.24
CXXC1-213ENST00000590234 MIA2Q96PC5 1412 aa22.81■■□□□ 1.24
CXXC1-213ENST00000590234 MBD5Q9P267 1494 aa22.8■■□□□ 1.24
CXXC1-213ENST00000590234 KIDINS220Q9ULH0 1771 aa22.8■■□□□ 1.24
CXXC1-213ENST00000590234 SPAG9O60271 1321 aaKnown RBP22.79■■□□□ 1.24
CXXC1-213ENST00000590234 SIGLEC1Q9BZZ2 1709 aa22.78■■□□□ 1.24
CXXC1-213ENST00000590234 BCORL1Q5H9F3 1711 aa22.77■■□□□ 1.24
CXXC1-213ENST00000590234 INO80Q9ULG1 1556 aaPredicted RBP22.77■■□□□ 1.24
CXXC1-213ENST00000590234 ATP7AQ04656 1500 aa22.77■■□□□ 1.24
CXXC1-213ENST00000590234 CCDC141Q6ZP82 1450 aa22.76■■□□□ 1.23
CXXC1-213ENST00000590234 REREQ9P2R6 1566 aa22.75■■□□□ 1.23
CXXC1-213ENST00000590234 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
CXXC1-213ENST00000590234 ADAMTSL3P82987 1691 aa22.74■■□□□ 1.23
CXXC1-213ENST00000590234 RSPH4AQ5TD94 716 aa22.73■■□□□ 1.23
CXXC1-213ENST00000590234 PTPN23Q9H3S7 1636 aa22.71■■□□□ 1.23
CXXC1-213ENST00000590234 FGD6Q6ZV73 1430 aa22.71■■□□□ 1.23
CXXC1-213ENST00000590234 RTEL1-TNFRSF6BF6WH68 1400 aa22.69■■□□□ 1.22
CXXC1-213ENST00000590234 MADDQ8WXG6 1647 aa22.68■■□□□ 1.22
CXXC1-213ENST00000590234 AGLP35573 1532 aa22.67■■□□□ 1.22
CXXC1-213ENST00000590234 MLECQ14165 292 aa22.66■■□□□ 1.22
CXXC1-213ENST00000590234 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
CXXC1-213ENST00000590234 ADGBQ8N7X0 1667 aa22.65■■□□□ 1.22
CXXC1-213ENST00000590234 TSPY4P0CV99 314 aa22.65■■□□□ 1.22
CXXC1-213ENST00000590234 TSPY10P0CW01 314 aa22.65■■□□□ 1.22
CXXC1-213ENST00000590234 A2MP01023 1474 aa22.64■■□□□ 1.21
CXXC1-213ENST00000590234 PLXNC1O60486 1568 aa22.63■■□□□ 1.21
CXXC1-213ENST00000590234 MAST1Q9Y2H9 1570 aa22.63■■□□□ 1.21
CXXC1-213ENST00000590234 RIMS1Q86UR5 1692 aaKnown RBP22.62■■□□□ 1.21
CXXC1-213ENST00000590234 FER1L4A9Z1Z3 1794 aa22.62■■□□□ 1.21
CXXC1-213ENST00000590234 PPARGC1BQ86YN6 1023 aaKnown RBP22.61■■□□□ 1.21
CXXC1-213ENST00000590234 PTPRMP28827 1452 aa22.6■■□□□ 1.21
CXXC1-213ENST00000590234 CROCC2H7BZ55 1655 aa22.59■■□□□ 1.21
CXXC1-213ENST00000590234 DNMT1P26358 1616 aaKnown RBP22.59■■□□□ 1.21
CXXC1-213ENST00000590234 SHANK2Q9UPX8 1470 aa22.57■■□□□ 1.2
CXXC1-213ENST00000590234 ABCC5O15440 1437 aa22.57■■□□□ 1.2
CXXC1-213ENST00000590234 DAPK1P53355 1430 aa22.57■■□□□ 1.2
CXXC1-213ENST00000590234 DHX29Q7Z478 1369 aaKnown RBP22.55■■□□□ 1.2
CXXC1-213ENST00000590234 FAM50AQ14320 339 aaKnown RBP22.55■■□□□ 1.2
CXXC1-213ENST00000590234 ESF1Q9H501 851 aaKnown RBP22.49■■□□□ 1.19
CXXC1-213ENST00000590234 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
CXXC1-213ENST00000590234 GGT6Q6P531 493 aa22.46■■□□□ 1.19
CXXC1-213ENST00000590234 PLPPR3Q6T4P5 718 aa22.46■■□□□ 1.19
CXXC1-213ENST00000590234 CNTLNQ9NXG0 1405 aa22.46■■□□□ 1.19
CXXC1-213ENST00000590234 KIF3BO15066 747 aa22.45■■□□□ 1.18
CXXC1-213ENST00000590234 KIF15Q9NS87 1388 aa22.45■■□□□ 1.18
CXXC1-213ENST00000590234 EIF2AK4Q9P2K8 1649 aaKnown RBP22.44■■□□□ 1.18
CXXC1-213ENST00000590234 CHIC2Q9UKJ5 165 aa22.44■■□□□ 1.18
CXXC1-213ENST00000590234 ANKRD30AQ9BXX3 1397 aa22.43■■□□□ 1.18
CXXC1-213ENST00000590234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
CXXC1-213ENST00000590234 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
CXXC1-213ENST00000590234 MROH2AA6NES4 1674 aa22.42■■□□□ 1.18
CXXC1-213ENST00000590234 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
CXXC1-213ENST00000590234 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
CXXC1-213ENST00000590234 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
CXXC1-213ENST00000590234 C3P01024 1663 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms